Gene detail

Detailed information of ENSJQFP00000022340.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000023233

ATGTCCTCTGTGTCAGACATCATGGATGGTCGCCTCATCCTCAAGCTCCTCACGTTAATCTTGGAACAGCAGTCCAGTGGAATGGAAGCTCTAAACTTGCCCGAAGATGTCATCAAAGATGCGGAAGATGCGTGGAAAATGGTTTTCGACGCTCTGACAATATCCCAACTGCAGTCTCACTTAGTTGGCTCTTTATTTCTTCCCTCATTTGCGGAACGCAtattcaacattcaagttcTTGAAGATGACAGTACAGTATCCGATGATGGCTCTACAAAGCCCAGAGCTCTTCTGAATGTAGAGAACACTCTTGTGGATCAGTTTGCCGGTGATTTGAAGTCAACGATAAACACCTTGGCAGAagacGAGGAATATGAGGAGGAACCACCCAACACTGGCCGCGAATTCGATGAACGATACCACTGGCACTCACTGAGGCCTCTGTCTGATGATTATGACAGGACTAAACAATCGTTTTCAGAGAAACCTCCCAGTGATCCAAGAGAAAAGCGTTACTTTATGAAGCGAAGGCAGAAATTTGTAAATTTTCAAAGGTTTTATGGCAACTCGCTTGAGGGTGGAATCGATCGGGCACAGATAATCACCCtgcaaaagacaaaaacaccCAAGGAAGGGAAGCTGAGCAAAAAGGGTATGCAGATAATCGAggacaacaaagagaaaaagagaGAGCAAGAGAAGAAACAAGATCAAGAAAAATGGAGCAATGTACTGAGGAACGTTGAGCTGAACGTAAACGAACACAACTTCACTGGTGCCTTGCAAGCAATTGACAAATTTCAAGCGAGCTGTAGGTCCTCGGAAATTCGTCTTAAAGCGCTCATGAAAAAAGTAAAGTGCTGCTGGGATGCTTGGAATGACACACGAAGCCGTGATTCCAAGTCACTTGATATGACCTACCCTGTCCTTGTGATGGAAAGTGTCCATACAATAGCAGACGAATTTGGAAATTCGCTTTCAgacaaggaaaaaaggaaactaGCAAGATATGTGGAAAAGCTGGGATTCACTGACATTGCTTCTACTTTTTGCCCAGTGAATCCAGAAAGCGGAAGTAAAAAGCAGACGCTGGATCTGTCTGTTCACACCACAAGCGCGAGGTTCCAAATGGAGCACATGGGGCATTTACTGAAACGGGACGACCGCAGGGATCCCGACCCGCGGGTTCAGCACTTCATTCCTGACGGATGGCAGCGCGAACTTCTAGATGCTGTGGATAACAATGAGTCGGCAGTGATAGTGGCGCCAACATCTTCTGGAAAGACGTTCGCTTCCTACTACTGCATGGAGAAGGTGCTACGGGAGAGCGACGATGGAATTGTAGTTTATGTTTCGCCAACTAAGGCGCTTGTGAATCAAGTGGCTGCCACGATTTACGCGCGCTTTCGCCTGAAGAAACTACCAGATGGACAAGCTGTTTATGGTGTATTTACAAGGGATTATCGCCATAATGCGTTAAATTCACAGATCCTTGTGACTGTTCCACAATGTCTGGAGATCCTCCTTCTCTCGCCACGCAGACAGGACTGGGCAAAGAATCTCAAATATGTTATCTTTGATGAGGTTCACTGTCTTGGTGGGGAGATTGGTGCGGAGGTATGGGAGCACCTTCTTCTTCTGGTCCGCTGTCCCTTCCTTGCCCTATCGGCTACTATTGGAAATCCGGAGGACTTGAAAGCGTGGTTGCAAAATGCAGAAGACTTTCGTAAACAACAAGATAAACGAGGCAATGTTCTCCAAAGAAGGTCTTACAGAGTTAGACTTGTAACATACTCTGAACGATATTCCGACCTTGAGAAGTGTATGTACCTTCCAAATGATGATAACGGATCACACACGGGCAAGTCTGGCGAATGCAGACAATTGCACGATCCGAAGAGTTCGGGTGACTTCGTTAGACTTCATCCTTGTGCACAGCTTGCAACCAAACAGCTTCAGGATAATGGATTCCCAGGTGACATGTCCCTGACTCCGAAAGAAAGCCTTGAATTGTATGACGCCATGATCGCGCATTGGTCAGACAAAGACTCTCTTATACAACTGGCTCCGGAGAAATATTTCCAGGAAATGAAGATAATCTACAAGAAACATGCCCGTCAATACGAGAATGACGTGAAGAAAGAATTGAAGTCTTGGGTGGATGGCGAACACCTGGAACAGGTAGAGGGTGTAATTGGCTCTCTGAGTTCCATCTGCCCAAGTAACGCCGAAATGCTGCCAACAGGGAAAGTTTTTATTTTGAATCATTTCGTACAGCTGGTGGAACAACTTAGAGCGCAAGAAAAACTGCCGGCTCTTGTATTCAGCTTTGACCGCTCAGTGTGTGAGAAATTGTCAGCACGACTGACTTTACAGTtcgagaaaaaggaaaacatgcTAAGAACAACGCCTGGATCAAAATATTTTCAGAAATTTAAACGGATGCAGAAGGAACAAAGACGGGACCTGAAGCAATCCAAACGAAGAAGAGACAAAGAGAAAGCACTTCCACAGGAGAGCTTGGAAGACCAGGACAACGAGAGGGATTTTTCAGCTTTGAAGGAGCCTTTGCCAGAGTGTTCGCTGGCTTGCAAGAACGCAGTTGGAAATAAGGATCTACAAGAGATCAAGAACCGAATTCGGTACATGTCAGATCGACACATATTTAAGAGGGCGTTTCTGCGAGGAGTCAGCTACCATCATGCTGGCCTGAACGGCAGACAACGTAGCGTTGTGGAAATGCTATTTCGTACAAAGTACCTACAGGTTGTCGCCGCTACTGGGACTCTGGCCCTTGGTATCCATATGCCTTGTAAAACGGTCGTGTTCGCAGGAGACTCGCCTTTCTTAAACTCGCTGCAGTACAGGCAGATGTCCGGCAGGGCTGGCCGTAGAGGGTTTGATCCGGTGGGCAATGTTGTATTCTTCGGCGTCCCTTACAAAAAGATTAAACGACTCATCACTGCCAATGTTCCAAAGCTCGTTGGAAATTTCCCCATCAGTGTCTCACTCGTGCTGCGCCTGCTGCTGATGTCATCAAAAGGGGACGACAAGAACGATGCACTCGCAAAGGCCTTAACTCTTCTGTCCCATCCGTTCATCTGCCAACAAGACGCCGATATGAGGAGTCAAATCAAGGGACATTTCTTGTTTAGCGTTGAGCTTTTGGCCAGATTGAGCTTAATAAACTTAAAAGGCGCACCTCAGGAAATGGCGGGGCTTGTGACCCACCTGCACTACCATGAACCATCTAACTTTGCGCTAGTCAGCTTCTTGCAACGAGGTCTCTTTCACAAAATTTGTTCGCCGAATGCATCGGGCAAATTTTCACAGGATGTAATGCGACAGATGGTGCTTGTCCTCAGCCACTTGTTTGGTCGCGAGCCCTTACACTCGTCTTACAAACGGAGAGTCCGCGATTGTCCGTCATCAAAGGTTCTACTGGATGATCTTCCACAGCGGTTTGCCAAAGCTGTCCATGATTACAATCATCAAGTAACCAACGTCTTCAAGCAGTATCTGATTACGATGGCCGCGGAACAACAGAGTATAGGAGCGGAAAGATCGCTACCATTGTCAGGGATTGTCTTCCCGAGTGAAGAGACCGTCGCCGGGGTTTATGACCACGACACAATCAGAAGTCTTGTTCGTTCATCCATCCGTTCTTCGGCGTGCTCCTCGTTCGTTGCTCTATCAGGCAACTCGGACGAGCGTTTGTTCCCTGGACCCGAGGACAACCGCGGCGATGAAGATGGAATGGAGCATGTGCCAATCGATCAGCTGCTGAAGATTGCACGTCAGGGTGTGTACACGGATATGAATGTAGTGCCTGTCTTTCCCGTCAAGGCATCCCTGAATGCTTACGCTTTAGATTTTTTTAAGCACGAATCATCAAAAGCCATCgttaaagaaaacagGATCCAGGAAGGACAAGTTTTTACGCTTCTTAAGGACTTTTATCTCGCAATCAAGTCAATCAGTTGTTCCTTGGAAGAGCTCGGCCCTGAAAACGACAACGTTGTCCTTGCGTTCAAACAGCTGTCTGAGGAATACGGGAAAAAGTTCAACAAGAGGTTTCCAGGACGAGAACTTTGA

Transcript

ENSJQFT00000023233

gcCGAGTGATGGACagctaatacagctaatcagctaacgacaaaaggagatgatatgtagcttaacgcttttcacaagcagacgatttcggatacagagacaatctcgccgacatatttaccggatcgagtacgctgATTCACGTCAGTTTGTGGAGAGTTCTAAAGTCTCTACAAGATTTAGACCAGACTAGCACGCAGTTTCCACTTGACATGTCCTCTGTGTCAGACATCATGGATGGTCGCCTCATCCTCAAGCTCCTCACGTTAATCTTGGAACAGCAGTCCAGTGGAATGGAAGCTCTAAACTTGCCCGAAGATGTCATCAAAGATGCGGAAGATGCGTGGAAAATGGTTTTCGACGCTCTGACAATATCCCAACTGCAGTCTCACTTAGTTGGCTCTTTATTTCTTCCCTCATTTGCGGAACGCAtattcaacattcaagttcTTGAAGATGACAGTACAGTATCCGATGATGGCTCTACAAAGCCCAGAGCTCTTCTGAATGTAGAGAACACTCTTGTGGATCAGTTTGCCGGTGATTTGAAGTCAACGATAAACACCTTGGCAGAagacGAGGAATATGAGGAGGAACCACCCAACACTGGCCGCGAATTCGATGAACGATACCACTGGCACTCACTGAGGCCTCTGTCTGATGATTATGACAGGACTAAACAATCGTTTTCAGAGAAACCTCCCAGTGATCCAAGAGAAAAGCGTTACTTTATGAAGCGAAGGCAGAAATTTGTAAATTTTCAAAGGTTTTATGGCAACTCGCTTGAGGGTGGAATCGATCGGGCACAGATAATCACCCtgcaaaagacaaaaacaccCAAGGAAGGGAAGCTGAGCAAAAAGGGTATGCAGATAATCGAggacaacaaagagaaaaagagaGAGCAAGAGAAGAAACAAGATCAAGAAAAATGGAGCAATGTACTGAGGAACGTTGAGCTGAACGTAAACGAACACAACTTCACTGGTGCCTTGCAAGCAATTGACAAATTTCAAGCGAGCTGTAGGTCCTCGGAAATTCGTCTTAAAGCGCTCATGAAAAAAGTAAAGTGCTGCTGGGATGCTTGGAATGACACACGAAGCCGTGATTCCAAGTCACTTGATATGACCTACCCTGTCCTTGTGATGGAAAGTGTCCATACAATAGCAGACGAATTTGGAAATTCGCTTTCAgacaaggaaaaaaggaaactaGCAAGATATGTGGAAAAGCTGGGATTCACTGACATTGCTTCTACTTTTTGCCCAGTGAATCCAGAAAGCGGAAGTAAAAAGCAGACGCTGGATCTGTCTGTTCACACCACAAGCGCGAGGTTCCAAATGGAGCACATGGGGCATTTACTGAAACGGGACGACCGCAGGGATCCCGACCCGCGGGTTCAGCACTTCATTCCTGACGGATGGCAGCGCGAACTTCTAGATGCTGTGGATAACAATGAGTCGGCAGTGATAGTGGCGCCAACATCTTCTGGAAAGACGTTCGCTTCCTACTACTGCATGGAGAAGGTGCTACGGGAGAGCGACGATGGAATTGTAGTTTATGTTTCGCCAACTAAGGCGCTTGTGAATCAAGTGGCTGCCACGATTTACGCGCGCTTTCGCCTGAAGAAACTACCAGATGGACAAGCTGTTTATGGTGTATTTACAAGGGATTATCGCCATAATGCGTTAAATTCACAGATCCTTGTGACTGTTCCACAATGTCTGGAGATCCTCCTTCTCTCGCCACGCAGACAGGACTGGGCAAAGAATCTCAAATATGTTATCTTTGATGAGGTTCACTGTCTTGGTGGGGAGATTGGTGCGGAGGTATGGGAGCACCTTCTTCTTCTGGTCCGCTGTCCCTTCCTTGCCCTATCGGCTACTATTGGAAATCCGGAGGACTTGAAAGCGTGGTTGCAAAATGCAGAAGACTTTCGTAAACAACAAGATAAACGAGGCAATGTTCTCCAAAGAAGGTCTTACAGAGTTAGACTTGTAACATACTCTGAACGATATTCCGACCTTGAGAAGTGTATGTACCTTCCAAATGATGATAACGGATCACACACGGGCAAGTCTGGCGAATGCAGACAATTGCACGATCCGAAGAGTTCGGGTGACTTCGTTAGACTTCATCCTTGTGCACAGCTTGCAACCAAACAGCTTCAGGATAATGGATTCCCAGGTGACATGTCCCTGACTCCGAAAGAAAGCCTTGAATTGTATGACGCCATGATCGCGCATTGGTCAGACAAAGACTCTCTTATACAACTGGCTCCGGAGAAATATTTCCAGGAAATGAAGATAATCTACAAGAAACATGCCCGTCAATACGAGAATGACGTGAAGAAAGAATTGAAGTCTTGGGTGGATGGCGAACACCTGGAACAGGTAGAGGGTGTAATTGGCTCTCTGAGTTCCATCTGCCCAAGTAACGCCGAAATGCTGCCAACAGGGAAAGTTTTTATTTTGAATCATTTCGTACAGCTGGTGGAACAACTTAGAGCGCAAGAAAAACTGCCGGCTCTTGTATTCAGCTTTGACCGCTCAGTGTGTGAGAAATTGTCAGCACGACTGACTTTACAGTtcgagaaaaaggaaaacatgcTAAGAACAACGCCTGGATCAAAATATTTTCAGAAATTTAAACGGATGCAGAAGGAACAAAGACGGGACCTGAAGCAATCCAAACGAAGAAGAGACAAAGAGAAAGCACTTCCACAGGAGAGCTTGGAAGACCAGGACAACGAGAGGGATTTTTCAGCTTTGAAGGAGCCTTTGCCAGAGTGTTCGCTGGCTTGCAAGAACGCAGTTGGAAATAAGGATCTACAAGAGATCAAGAACCGAATTCGGTACATGTCAGATCGACACATATTTAAGAGGGCGTTTCTGCGAGGAGTCAGCTACCATCATGCTGGCCTGAACGGCAGACAACGTAGCGTTGTGGAAATGCTATTTCGTACAAAGTACCTACAGGTTGTCGCCGCTACTGGGACTCTGGCCCTTGGTATCCATATGCCTTGTAAAACGGTCGTGTTCGCAGGAGACTCGCCTTTCTTAAACTCGCTGCAGTACAGGCAGATGTCCGGCAGGGCTGGCCGTAGAGGGTTTGATCCGGTGGGCAATGTTGTATTCTTCGGCGTCCCTTACAAAAAGATTAAACGACTCATCACTGCCAATGTTCCAAAGCTCGTTGGAAATTTCCCCATCAGTGTCTCACTCGTGCTGCGCCTGCTGCTGATGTCATCAAAAGGGGACGACAAGAACGATGCACTCGCAAAGGCCTTAACTCTTCTGTCCCATCCGTTCATCTGCCAACAAGACGCCGATATGAGGAGTCAAATCAAGGGACATTTCTTGTTTAGCGTTGAGCTTTTGGCCAGATTGAGCTTAATAAACTTAAAAGGCGCACCTCAGGAAATGGCGGGGCTTGTGACCCACCTGCACTACCATGAACCATCTAACTTTGCGCTAGTCAGCTTCTTGCAACGAGGTCTCTTTCACAAAATTTGTTCGCCGAATGCATCGGGCAAATTTTCACAGGATGTAATGCGACAGATGGTGCTTGTCCTCAGCCACTTGTTTGGTCGCGAGCCCTTACACTCGTCTTACAAACGGAGAGTCCGCGATTGTCCGTCATCAAAGGTTCTACTGGATGATCTTCCACAGCGGTTTGCCAAAGCTGTCCATGATTACAATCATCAAGTAACCAACGTCTTCAAGCAGTATCTGATTACGATGGCCGCGGAACAACAGAGTATAGGAGCGGAAAGATCGCTACCATTGTCAGGGATTGTCTTCCCGAGTGAAGAGACCGTCGCCGGGGTTTATGACCACGACACAATCAGAAGTCTTGTTCGTTCATCCATCCGTTCTTCGGCGTGCTCCTCGTTCGTTGCTCTATCAGGCAACTCGGACGAGCGTTTGTTCCCTGGACCCGAGGACAACCGCGGCGATGAAGATGGAATGGAGCATGTGCCAATCGATCAGCTGCTGAAGATTGCACGTCAGGGTGTGTACACGGATATGAATGTAGTGCCTGTCTTTCCCGTCAAGGCATCCCTGAATGCTTACGCTTTAGATTTTTTTAAGCACGAATCATCAAAAGCCATCgttaaagaaaacagGATCCAGGAAGGACAAGTTTTTACGCTTCTTAAGGACTTTTATCTCGCAATCAAGTCAATCAGTTGTTCCTTGGAAGAGCTCGGCCCTGAAAACGACAACGTTGTCCTTGCGTTCAAACAGCTGTCTGAGGAATACGGGAAAAAGTTCAACAAGAGGTTTCCAGGACGAGAACTTTGAGTTTTAAATCACTGGAAACGGATAGAAGATTTATAACGAGAAGAACCAGTCTCTGGTATATAACTGAGCCTTGATAGTCAGCTTACAGTATGAATAATACGTAATTACttaatttattattacaaaCACTAGTATTCAATTTGGCAGTGCCAACTCCTCTGGTGATGGATGTCAGTCCGTGCAGTTTTTCGCTAAAAACGCAACGTGCATTTTTCGATGTCagggtatttaaccctttcgccaAGCGCCACCTAAACCAGAAACTGATCAGATCAATTAAAACACGATTTGATATTTAATTGAATGCGTTTAATTGAtttgtttgattggttcatttatagtTTAAGCTCAATTGCGTTGATCATCATACGGCGACTGCTTCCACAGTGAGTCACATTGGCCCTGGTGTCTGAAAATACAAACAGTGCAGTAGTTAATATTACAAGTTCGTCAAATGCCATTGGTGTTCTCATTTACGAGCAAACGAACTTGTTATTTTATGGCCTGCTTGCTATTGGGCCGTTATTAAATGGGCTACTCACAATTCCAGCAGGAAGAATGAAACTTTTGATTATAGTTCTAAAACCAACGAACGTGAATCTGATACTTAGGTGATTCTTAAAGCTCAATGTTTGTTCTATATTGTATTTCTTATAGGTATTTTTGAAACATAATTTGGGATTTTAGTGTGAAAGTAGATTCACGGTTAGTTCACGGTTGCTGATTGGTAAATGACTTCGTGTAGTCCAGCTCAGTCGGTCGCACTGTAATTctactttcactcccagagtgaaaccttggttgatacaaagttttctaacttttgattatatgaacagaacccaaaagtgcgaccattcattggaaagctgttgagcagtactt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR052431 all species →	Family	SKI2 subfamily ATP-dependent RNA helicases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44533 all species →	DEAD/H RNA HELICASE, PUTATIVE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20103	DDX60; ATP-dependent RNA helicase DDX60	EC:5.6.2.7	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.