Gene detail

Detailed information of ENSJQFP00000022346.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000023239

ATGCGACTCAAACCCCGCCAAATCGAAAGCTGGATGTTAGCGTTGGGTCTATTGGATCAGCGGCAAGGAACCACCGAATCCGAGAACTCTTTGCGGGACATTTTGAAAGATGGTTCGATCTTGTGCCGTTTAGTGAATCGTCTTAAGCCAGGTACCATAAATCAGATTTATGAAGGACCTATTTCGGATGAACAGCGCTTGGATAACATAGCTTCGTTCTTGAAAGCGTGTCAGGATCTGCGACTAAAAGAGGACGAGATTTTCTCTCTGACCGACCTCGACTCTGAAGAAGGTTTTAATCGCGTCTTACGAACTCTTGATTGCCTAGAAAATGTGGCTACAGGATATGGTTTGGGTAGGCAATTTACCAAGCACCATGAACTGACAGAAACACAGATAACAACCAATATAGACACAGAAGTCCGAGACAACACCAAGCCTCTTGAGATGACAGATTATGGAGGAGGTATTCACCTTGTTAAAGCAACTTTTCCATTCAGTGGTAGAGATGATGATgaggtatttaaaaaaaacaaaattttaattGTTGTTCAAAATATTTTGGACACAGAAAGAGCTCATGTCAGCGAGCTGCAAGTAAGAAATCATATTTTACTTTTAGCACAGGATATGCGAGTACTTGCTGGTAACTTTGAAGAAATTGTCCAGTTTCAGCAGATGTTTTTCCACATTATGGATGAATGTACCCAGTTACTGTGTATGTTGCTGCTTATTATTTACAGTGATGAATTATCAGCATTTATTGAAAGTAAAGGTGCTCCTTCTCCAGGAATACTTACACTTACAATGAGCCTAAGCAAGCCCTTTAGGCATCTGGACAAGTTTCCAAATCACATGAAAGAACTAGAAAGACATCTTGAGGAAGGACATGTAGATGAATTAGACACAAAAAAGGCTATTGCTGTGTTCCAGAATCTTGCTACAAGCTGCCATGAAAcacgaaaaaggaaagaaacagagcTTGAAATGCTGACTGGAACAATTGAGGGATGGGGAGAAGAGGATATCAGGAAACAAGGAGATCTCTACTTGATGTCTCAATTCCTTATTCATGGAGAGAATGGGGAGGTCAGAGAACGGTCCTTTCTTCTCTTCCCTAGTTGTCTTATTATACTTTCAGTCAATGCAAATGCTTGTGGATACTGCTTTGAGAAAAAGTATGATATTTCAGAATTAACAGTGCACTCGCTTGAGGATTCAGAAGGCATTTTAAATGCTTTTGAAATAAGAGTAAATGAGGATGTGATGAAACTATCCACCAACCATGCTCATGAGAAAACAGCTTGGATTGAAGCACTCCAACAGTCTAGTCCAAGAATACGGAAACAATCGCGGCAATCTGACATTATAACGTCCCCTTCACCTTGGGTTGAAAGGCAACGATTATCCTTGTCTGAAAGGACATTCTCAAAGTCCAGCCCTCCTAGAAGCGATTCCACTGGTTCCCCACCAAGCTCAAACACACCAAAGAGTTCTCTAAGTACATCTGGTGTGCACTCTCAGtCATCAAGTGAAGGATTAAAGTTTCGCTCGATGTCCGCTTCGCATTCAGTCACTACAGACCTGACTGTCATGAGTTCACTGCCTCTAAGTCCTCACAGAAAGGGACACTGGGATTTCACGCGACTCAGACCAACTCCCCCCTTACGGCCTGCATATGCATTAATTGCCAAAGAGGACACCTCGACAGCACATCGTTCAATGCGGGGTATACTCCATccatcaagaaagaaacaagGTCGGTCAAAAAGCGAACTTGATGATGACAAGCATGGGAGCTCATCAGGAGGTAGTCGAGTGTTGGAAGAGGACATGCTCATTCTTCGAGTTGTTGAGGCTTACTGCACAAGTGCCAGAGCAAGACATACCATAAACAGTAAGTATCATGCTCTTTTGCTCTCCAGGGAAGCAGATCTGCAAGTTCCATGGTTCTCAATTAGTATCAATCTTGTCTACAGGGATGTTGTCAGTGAATTCAACTGTCTAAGACGCCGAGTGGAAGAACTGCAAGTGGAAACAGAGTCACTTCGACAAAGTTTACTAGAAGAACAACATGCCAGAAGAAAGATGGAAAAGTTTATCCGTTGTTCGCTGAAGGGTGTTATTCCCGATGTCAAATGGGAAGCTATTAATGACAGCTag

Transcript

ENSJQFT00000023239

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16614 all species →	RhoGEF67_u2	Unstructured region two on RhoGEF 6 and 7	Disordered	Interproscan
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46026 all species →	RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02186	CASP2; caspase 2	EC:3.4.22.55	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.