Gene detail

Detailed information of ENSJQFP00000023043.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000023989

GAAAATAGCTCGAAAATTATCATCGACCTAAGCAGTAACAGGGAACGACAAGAGTTGTGGCCATAAATCAATTTGACAAGGATCTTTTGTAGAAAACCCCACCAAAAGTACAAAAAGAAGAGGCCTCAAAATCACCTGAAATCGTTTCGATGAATCCGAACCCTAAATATAAACTTAGAAGCCTGGCATTTTGAGCCCTTAATCTGAATCTGTCAGCAGTCCGTGTTGCGTCAGTATTGTGCACATGGTGGATTTCttaaataatttgtattttggcgACACTTTTTTCGTAAAACAAAATGCCTATCAGTTGTAGATTTTACAAACACAAGTACCCTGAAATCGACGATGTGGTTATGGTTAACGTACGAAGCATCGCCGAGATGGGGGCTTATGTAAATCTTCTCGAGTACAACAACATCGAAGGAATGATCTTGTTAAGTGAACTGTCGAGAAGGCGTATTCGTTCTATAAACAAACTAATAAGAGTGGGAAGGAACGAATGTGTGGTTGTCATACGAGTGGATAAAGATAAAGGATATATTGATTTGTCAAAAAGGAGGGTTTCACCTGAAGAAATCAAGAAATGTGAAGAAAAGTTCACAAAAGCAAAAACTGTTTACAGCATTTTGAGGCACTGTGCAGAGATCTTGGGTTATGAGACAGACAGGCAACTAGAAGAACTGTATGAGAAGACAGCATGGCATTTTGATGAAAAGTACAAGACTCCTGGAAGTGCCTATGAAGTGTTCAAATTATCAGTTGGAGATCCAACTTTGTTGGATGAATTGGATCTTGATGACAAGACAAAGTCCACATTGCTCTCCAACATCATGAGACGACTCACTCCCCAAGCTGTTAAAATTCGTGCTGATATTGAGGTGTCATGCTATGCTTATGATGGAATTGATGCTGTGAAGAGTTCCTTGTTAGAGGGGCTTAAATGTTCAACGGATGATGTTCCGATCAAGATAAACTTGATTGCAGCCCCACTGTATGTAATAACAACCACTACCTTGGATCGTGATGATGGCCTCAAAGCTTTGACATCTGCGGTAGATGCTATCAGAGAAACCATCAAGAAATTTGGGGGAGACTTCACTGAAAAAGCCGCACCTAAGCTTGTTACAGAGAGTGATGAAGCAGAACTTGCAAAACAAATGGAAAGATTAGAGAGAGAAAATGCAGaagttgatggtgatgatgataacccAGATGAAGAAGAAGTCTCAGAAGATCTTAAAATTTAAGTTTTGTGCCTTTGTAAGGAATGCTGATTGTCTTCTGTTTTGCGATGAATCATTTTGGAGGATCCTTAACCACTGTAAACCTTAAGAGTGATCAATGTGTGATCATGTGTTCACATTAACATGTCCTGCAACAAACGAGAATACAGAAAATGATCATATGTGAGGGAAGTCGTTCATGTTACATGTCACTGTATATCCAAATCTGCGCTATGTATTGAGATGGTATTCATGGAGATTTGCCTGTGCAATAACTAGAGTGCCCTCCGTCTATGGCCAAAAGATGAATGTCATTATGTTCCTGATTCTTACCCACCCCCCCACTCCCCCTTCTCTGGAATAGGAATGTTCAGAACAGACCACTACGAAAGAATATTCCCATAATGTTCATTATCAATTCAACAAACATTGGTGAAAACGGAATGACCCTTGATACTTTTCGTCTTTAACTGAGACCAATAAACATACCAGTGACGTGTTGGTGTTGCATTATTCAGTTGGTAGATCAAACACAGATGTTTCTTGAGTGATGCAGGGCAATTGGAACTAAGATGCTAAAATCAATGGCGCATTTTCACTTTCCCCAAAGAGTTAGAAGCCCTCATATTAGTGCCAAATTTATAATATATAAGCTTTAAAGTGCTGAGTAAAGTAACATACAACTTGCAGTTGCAGACAGTTTGTGGCTCAATAGCATCTATAAAGATTATCAGTAAcactagttcaagtgtatctgTAAATTTTAATTGTCTCTTCAACAGCACAGTACTATTTTCCAATCACAGTATTGTATAATAAGGTCAACTTAAGTGTTCAATTTTACAATAACAGCATTTAGTTATGGGAACTTGTATTATGCAAATATTATAAGTGTGGTTATCGGTTCCTTGTCATATGGGTTAATAATTAACACTAATTTCATTAATAAGAACCTAATGGGGAAAACGTGTATGGGGCCTGGGTAGGATCTACTGTCTTTCAGCAAATTTTGAGAAGGGGGAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07541 all species →	EIF_2_alpha	Eukaryotic translation initiation factor 2 alpha subunit	Family	Interproscan
PF00575 all species →	S1	S1 RNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR003029 all species →	Domain	S1 domain	Interproscan
IPR044126 all species →	Domain	IF2a, S1-like domain	Interproscan
IPR024054 all species →	Homologous_superfamily	Translation initiation factor 2, alpha subunit, middle domain superfamily	Interproscan
IPR024055 all species →	Homologous_superfamily	Translation initiation factor 2, alpha subunit, C-terminal	Interproscan
IPR011488 all species →	Family	Translation initiation factor 2, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10602 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005850 all species →	Cellular Component	eukaryotic translation initiation factor 2 complex	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0033290 all species →	Cellular Component	eukaryotic 48S preinitiation complex	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03237	EIF2S1; translation initiation factor 2 subunit 1	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.