Gene detail

Detailed information of ENSJQFP00000023744.1 in Rhodactis osculifera

Genomic Location: chr4:11833932...11845542
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSJQFT00000024690

GTTTTCAACATGGCTTCCGCAGCATCGGAGTCAGTGGAAAATAACGAAAATCTTTTGAGAACACTTTTTCGGCAGTCTTTTCCAGATGCATGGAAGGAAAACCAGGATTTTGCTTCTTATCTGGCGGAACTTAGTGCTTCTAGTCTGGATAAACTGAGCAGAGAACCAGAGCGCTTGGCAGAAGAAAAAGCTCAGGTCTTGGAACAGACAGAACACTTGGCATTTCATAACTATAAGACCTTCATTAAGACTGCAGAATGTTCCAAAGAAATCTTCAAGGATTTTATTTCAGTAGAGAGGCATGTTGAGTCCCTACTGGATAAGCTACCAACCTTTTCAAAAACATGCAGCAATTTTATGGAAACAGCACAAGATATAAACAGCAGTCGTCGTCTAAATTCCTTAACATTACAACGTCACACTCAGTTGCTTGAAATCTTGGAGATCTCACAATTAATGGATACATGTGTGCGTAATGGTTACTATGAAGAAGCTTTAGAACTATCTTCCTATGTACATCGGCTTGAGAAGAAGCTGTCCAACATTCCAGTTATACAAAGCATTGTTGAAGAGGTGCAGTGTTCTACTGAGCTTATGTTGTGTCAACTCCTGCAGCAGTTGCGCTGTGCTATCCAGCTGCCAGCTTGTTTGCGAGTAATTGGCTACCTGAGACGTCTTGATGTGTTCACAGAGTCTGAACTCAGAATCAAGtTCCTCCAGGCCCGTGATGCATGGTTACAAAGTGTCCTATGTTCAATTCCTTCTGAAGACCCATATTATCACATTACCAAGACAATTGAGGCCAGCCGTGTCCATCTGTTTGATATTGTAACTCAGTATCGTGCCATATTCTCAGATGATGACCCAATACTGTCAATGGAAAATGAGGAAAATCCAGTCTACAGCAACTTGTTTCATTGCTGGACTGCCCAAAAGGTATATCAGTTTTTAACAACCCTGGAACATGACTTGGACCGTGGAGTGGGGAGCCGTCTTGATTCATTGCTGGGCCAGTGCATGTATTTTGGGCTGTCATTCAGTAGAGTTGGGGCTGATTTCAGGGGGCTGCTTCCTCCTCTTTTCCAGAATGCTGCCCTTCAAGGTGTTGTGAAGGCCGTGGAGGATGCCACCAGAAGATTTAATGTTACAATGAAGTCGTACTCTCTGCTTCCACTATCTGTTGCAGTAACATATGTAGTGTCCACAAACTCCTTCAAGCCTGGTGATGAATCAAATCAAGTGTCATCTCCTCCTGTAGTGTTGTTACAGCATCCTCCACTAGCAACATACACCAACTCCATCCTATCAGCCTTAAATGAGCTCAGGCATTGTGCCCCACTGGCTCTGTTCTTGCCACTTGCTAATGTTCTACAGGCTTCACTTGATTCTGTTGTAGCAACTACATGTTCTTTTCACAGAACAGAAGCTGCCGTCCTAAATGAACAAGAGAGGGCAACGTTCGCAAATTTTTGTCAAGTTCTGGGGAGAGACCTTGTTCCATACATTAACTATTGCATTGAAGCAATCTATCCAAAGTCTGTGCTGAATACTGTGTTAGGTACCAATTCTCTGGACGGCCTACCTTCCATGCCCTCTAATAACAGACCTCTGCGCTTGGATGTAAAGAAGATTGTGTTACCATTAGAACCAGTGATACCCCAGGACACCAAGAATAATGAATCTAAAGGAGATCATGGAGCAACGGCTTTCGAATTACAGCTGCCAACCAAAGACGTTGTACACAATGAGAAAGAAAATCAGGCCCAAACACTCGCTTCTGATACCAATAATCAACAGACCAAACAAGAATTACAGGAAGAACTGAAATCATAAGGCGCGGTAATCAAATCTGTTGCCGAAACATTTCACTTATTCTGTAAGCTAAgcttatctccgaattcttaaAGGCGAAGTTGTTTCGATACAAGTCGAAGGGGATTCGTTACACATGTGACGTCGATTCGATACAAACTCAAGTTAGCTCAAGTcgtttcgatacagaatactaaaatggatCAGGTTTGTTTCCAAGAAGAAGTTACGGCGCATCTAGAAAAAAGGTTCCGAGACTCGGCAGCTTCATTAAACGGCTCAATAAAGTTTGTTCTTTTAGGTCGCAAGGAATTTGTTgaatagaaaacaacaaatcaccgCATAAGAAAGACAAAAACTAACACTTATTCTTTTGATGATGAGGATAAAaactttggtggctttttagttttggattttagaaaatgatgacgtcacgtggaAACGATCTATAGATAAACGAAGAACGTTTTATAATAGAATCGTCAATCTTTGAAATAGATTACAACAATCCATAAGGTTAAGAATTTTCTACACTTTTAAACGTAAATTGAGATCGACTCTTATGAATTCATAGTTAGTATTACActttattatattattgta

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006112 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04124 all species →	Dor1	Dor1-like family	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007255 all species →	Family	Conserved oligomeric Golgi complex subunit 8	Interproscan
IPR016159 all species →	Homologous_superfamily	Cullin repeat-like-containing domain superfamily	Interproscan
IPR016632 all species →	Family	Conserved oligomeric Golgi complex subunit 8, Metazoal and Viridiplantae	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21311 all species →	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0017119 all species →	Cellular Component	Golgi transport complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20295	COG8; conserved oligomeric Golgi complex subunit 8	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.