Gene detail

Detailed information of ENSJQFP00000023838.1 in Rhodactis osculifera

Genomic Location: chr4:19372466...19386846
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSJQFT00000024784

GAGTGTTATAATGGCAGAATGGCGGCTTTCGAAGTGCGGAGAGACGAACTTGTGTATGATGTTGTATTATTGAAACCGCTGTCAAAAACCGACTGTTTCCTTTAGAAACTCAAAGTGCACTTTCTGACCGAAAAAacatgtcattccagtcgtcgGTGTGTCATTAGGTTTTTCTTCCAGGAAGCTAGAATTTTAGCAAATTTTGATCTGTCGTTGAGGACAGTTTTCATGACTCTTTCCGGCTGCGAACGTTTACTTAATGGCAGCGCAAACGAACGtgGGTATGAAGGCCGACCCAGAACAGCTATTTTCGAAGCTTCATCGTATAGGCAAAGGTTCTTTCGGTGAAGTATTCAAGGGAATAGACAACAGGACAAATGCAGTGGTAGCAATCAAGATTATTGACCTGGAAGAGGCAGAAGATGAGATTGAAGACATCCAGCAAGAAATCACAGTGTTGTCACAGTGTGACAGTGCTTTTGTCACAAAATATCATGGTTCATATCTCAAGGGCACAAAATTATGGATTATCATGGAGTATCTTGGAGGAGGGTCCGCCCTTGATCTGATGAAAGCTGGAGCTTTTGAGGAGTTCTACATAGCGACCATCATTCGAGAGGTTCTCAAAGGCCTTGATTATCTCCATTCTGAAAAGAAGTTACACAGAGATATAAAAGCCGCAAATGTCTTACTGTCGGAACATGGCGATGTTAAACTAGCAGATTTTGGTGTTGCTGGTCAACTGACAGACACATTGAACAAACGCAATACATTTGTTGGGACACCATTCTGGATGGCTCCAGAAGTGATAAAACAATCTGCATATGATTCAAAGGCAGATATCTGGTCTCTTGGAATAACTGCCATTGAGTTGGCTAAAGGAGAACCTCCCAATTCGGATCTTCATCCAATGAGGGTCTTATTCTTAATACCCAAAAACAATCCCCCTGAACTATCAGGAAACTTCAGCAAGGTCTTCAAGGAGTTTGTGGCCATGTGTTTGAACAAAGACCCAAATGATCGACCAACAGCAAAGGAACTGCTAAAACACAGGTTTATCagaacagcaaagaaaaattCTTATCTGATAGAGTTAATAGAGAGGTTTAGAAACTGGAAGCAAGAATGcagagatgatgatgatagtagcTCTGGGGAAGAGAATGATGATGATGGAACAAGTTCAATTAATACTTCTAAATGGACCTTTCCTCAAGAGAGAAAAAATCCTTGGTCAGAAGATGAAATGCCAGTGGAAAATGAAAATTCATTGGCAGCAGATGTAAATAACACAGATGTGAACGACGCATCAGAGGACAATAAAGAGAAGGCAGAAAACCCTCCGTCAAAGTATTTATCAAGTGTTTTATTACCAATTTTGTCTAAGCTGAGCTCAAGTCATGCAGGCCAGGGTAGTTCAATAGAACATCTTACTGATGCATTCAAAGCTGTGGAGAGATCTTGTCCAGGGTTAACGGACAGCCTAGTCGAAAAGATAATAGCGCATTTTCAACATGTTAAAAGTTGATAACCAAGAGATGCGTTCGATGTAACTCTACTTCTTAAACTCCAGGAGAAATGCACCGTACCTACAACGTTGTCCTGGTCAAGATTCCACTCGGCCCGCCGATAACTTACGTCACGTCAAAGAGTTCAgcgtgttttcttttttaccaCAGAAAGTTTTAGTTTGTACAGTGTAGCTCATTGCAGGTTTTGCTCCTTCGTAGTGTACTGTTTGTAACAGCAGCTAGCAACTACTAAAATGAGAAGAAACCATGATTTCTTCGACACTGATCTCGGTTGTACTATGGCACCTACAACCCTTGCAACGAAACAGAACAATCTTGTGACGTTTGATTCTTTTCTCTTTTCTGTCTGGACTTTTTTTTGTAACAGCTACTTGCTTCTTAGTGGAGATAAACGTTTATACGAGCGCTTTCTACATGCATTTCACCTAGTGTTTATCTTATCCGTGATACTTCAGAACTTTGTTGGTTCGTGTACAGTTGTTCTTATCTCCAACTCATTCTGATTATCAAGTAGTTTGTGAGCTCGTGGTGCGGTCTATCACGTGACAGTTGACGGGAGCTCCGTCCGACAGATCATTTGTCATACTTGACATTCAGAGCGAATAATCGATGTAATCGAATTACCTTCGTAGAAATCCATATTGTGTTGTCATTTCCGTCTTCCCCCGAAACCATGTTTTCGGCAAAATGATCCACACACTTTTCCCTATCGCAAACACGCAAACATACCTTGCCAATGTCCTCTGTTAGGGCCTTTATTTTGTGGAAATCGTATTTTAGTTTCTgtctctgtttttgtttttattttccttgAGCTATGTATTCAGTGTTTCTCCAAACTCACTTTTGAAGCTTAGAGAACCAAAAGCTTGGAAGCCACGTCAGACACGcaaacccctccccccccccccccctcccttaaCTTTTGCCGTATTATCGTTTGTTATATAGTTCAGCATCAATTATTCTCcttttctgattgggttaaatttaaG

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001068 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF20929 all species →	PDCD10_N	Programmed cell death protein 10, dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046409 all species →	Homologous_superfamily	Programmed cell death protein 10, dimerisation domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050629 all species →	Family	STE20/SPS1-related Proline-Alanine-rich Kinase	Interproscan
IPR048288 all species →	Domain	Programmed cell death protein 10, dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48012 all species →	STERILE20-LIKE KINASE, ISOFORM B-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08838	STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4	EC:2.7.11.1	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.