Gene detail

Detailed information of ENSJQFP00000023958.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000024905

ATGTTTAACGTGCCTGCAAGTCGCAATGAGTACCAAACCATTAAACAACAGCTGGAAGTAGAGAAAATTCCCGGAGTGAACACAGGGGATCCTCCACGATCCTTCCACTCACTGTCTATAGCTGAACAAGCTCAGATGGAGAAGAAGAGATTGCAAGATTATTGTCATAAAGCATACAAGAGAGTGCGCATGAGCAAGCAAGAGACCCGTCACACCATGATTTGCCAGCGAGAAAATTCCTTTTATGTGGACACCGTTAGAGCATTTCGTGACAGGCGGTATGAATTTAAAGGACTGTTAAAGGTTTGGAAACGTAAACTTGGGGCTGCAGTACAGAGTGGAGATGCAGATGAAATCAAAAGTTGCAAGAGCAAGGAGATTCTGTATGACTCTCTACAGCTGGCACATAAGTGTATTCTGAACTCATTTTATGGTTACGTCATGAGAAAAGGggcTCGGTGGTACTCAATGGAAATGGCTGGCATTGTGTGTCATACAGGGGCTAACATTATTAGACAGGCCAGAGAAATTGTAGAGCAAATTGgACGTCCTTTGGAACTTGACACTGATGGAATATGGTGCGTGTTACCAGCAAGTTTCCCAGAAAACTTTCAGGTTACCACCATAAATCCCAAGAAAAGCAAGGTGACGATTTCCTACCCTGGAGCAATGCTGAACATAATGGTCAAGAACCACTATACAAATGACCAGTACCATGAACTGACAGATGCAGATAACTTGACCTATGAAATACGCAGTGAGAACTCAATTTTTTTTgagGTTGATGGACCTTACAAAGCAATGATCCTTCCTGCTGCTaaagaagaaggaaagaaactaaagaaaagATATGCGGTGTTTAATGATGATGGCTCCTTGGCAGAACTGAAGGGATTTGAAGTCAAGCGTCGCGGTGAGCTGCAGCTAGTGAAGATATTCCAGTCTTCTGTATTTGAAGCTTTTCTTCATGGCACAACTTTGGAGGAAGTGTACACTGCTGTTGCTGGAGTAGCAAATTACTGGCTGGATGTACTTTATAGCAAAGCTGCAAACATGCCAGACAGCGAACTCTTTGAGTTGATCTCTGAGAACCGCAGTATGTCAAGAAAACTTGAggagtatgagggacaaaagtccaCATCAATCAGCACAGCAAGGAGGCTGGCAGAGTTCCTTGGTGACCAAATGGTTAAAGACAAAGGCTTGAGCTGCCGCTTTATCATTTCAAGAAAACCAGAGGGGTCTCCTGTCACAGAGAGAGCTATACCTCTGGCAATCTTCCAAACAGAGGAGAGTGTTAAAAAACATTACCTTCGACGATGGTTGAAGGACTCCTCCATGACCAATTTTGACATCAGAAACATATTGGACTGGCAGTATTACATTGAAAGGCTGTGTAGTGCCATTCAGAAGATAATAACAATTCCAGCTGCGTTGCAAGGGGTGAGTAACCCTGTCCCACGATGTGTCCATCCAGACTGGTTACACAAGAGACTACTGGAAAAGAATGATGTGTTCAAGCAGCAGAGAATCAATGAGATGTTTGCACCTCTCCCTAAGAAAAAGGCAGCATTTGTTCAAGAACAGCAAAATGGAGAAAACCTTCCTTGTAACCAGTCTGAAGACATTGAAGACATTGCTGGCAAAGAATCATCTTCACTGGGACGACCTGTGGCCACGAAACGAAAGCGTGGACAGTTAACATTAGGTTCCTGTTCCCATAATGATGACAGACAAACGTTATCACAACCAGGTGATGGACAGCTGTCACAGACATGGAGAGAGGTTCTCGGAGAACCGCCTAAGTGGGGCCCAAGCAAGGAAGACAAGGAGAGATGGCTTGAATTCCAGAAGAAAAAGTGGAATTTCCAGTCCAAGCAGCGGGTAGAGAGGAAGCGACTTCGCAAGGAAGCAGACAGCATGGGTATCAGCACAATGGTGACGGGGCGTGGTCCATCTACAGGCCTCTCTCACTTTATGAGACAACAAGCGAGGTCTCTAGTTGACACACCTTGGCAGATAATACAGTTGGCAGAGACTGACACTCCGGGATTGTTTAAAGTGTGGGCAGTTGTAGGATCAGATCTGCACTGCATCAAAGTTAATGTCCCAAGGATTTTCTATGTGAATTGCCACACTCCCAAAGAAGGATCTGGAACAACTTGGAGGAAGGTTTCACGAACATTGCCACGTTCTCATACTGCACTTCATCTATATGAGTATACAGTCCCTGAAAAGATATTTAGGAATCATTCTAGTGAGTTGGCCACTGATCTCTCATCACCAGACATTGAAGGGATATATGAATCTCAAGTTCCTTTGTCTGTGAGAGCAATGATCAAACTTGGCTGTGTTTGTAAAGTCAACAAGACTTTTGCACGGCTTTTCAGTGGCAAGGATATGGACACCTTTGAGCTAGATCAACTGGAGTTCAAGACCCTTGCCGAGTGTTCCTATCTAGAAAATGTCAATGTGAAGCAAATATACTTCTACCACAGTTCCTCGGACAACCGTGTGGTTCTTGGTGTCTTTATTCCTGCCTCTCGAAAGGCATCTGTCTTTGTGATTGATGTTGTGAGAAACAATCAAATGCCAAACTTGTCATCTTTGTACCAATCTGAGAGAACTGCTAGGATACAAAGTGAAGGAGACGAAAGTTCCCTGCCTCCAGAGCATCACACATTTGACGTAAGGGTTGATACTGATCCAAGACAGGCCTACAGAGCCATTCAGAGATTCCTTGTCAATTACAGAGAAGAGAAGCGTGGACCTACCATGATTCTTGTGCAGTCACCCTGGGATCTTTGTCACCTTACATCATCTCTACCTGGTCTACAAGAATTTCCACTGGTCTGTCTTCCTTACAATGACAGTGATGCTCAACACAACATTCTTGATTGGCAACGACATGCTGCAAGAAGGATGATCCATCACtaccttgttgctgctgcatttTATGAGGCACAGTTGGAACTTGCACAATATTTCCATGTTCCAGTGGGGAACATTCCTCCTGATCCCACCCTTTTTGCTGCTGACCTTTTCTATGCCCGTCACCTTCAAAAACACAACCACCTGTTGTGGATGTCACCTACACATCGACCTGACCTTGGTGGAAAGGAAGATGATGATAACAGGCTCAGTGTTATTACTGAGGAGGGAGCAAGTATTGAGGTTAATAACTCAGGCTGCTATCCTACAGTCTGCATAGAGTTATCCATTGATTGTTTCGCTGTTAACACTGTGCTACAGTCTGCTCATATCAATGACTTTGAGGGTGGATCGGTATCTGCTGTCAGTTTTGACAGCTTGCCTCAGGCTTCCCTGGAAGAATTGGTTCAGGGGCTTCCAAGTGCTGCATCTGCTGGGTTGACAACATACGATGAAGCTGCATTGTGCTCTAATGCTTTCAGAATCCTTAAAGGAATGGTTCACAGCTGGTTACATGAAGTGTCTACCTATGGAAACTTGAAAGCTGATGCGCAGTTAATGCACTTCTACCGGTGGCTTTCCTCACCTTCTGCCCTTCTGTATGATCCAGCACTGTGTCGCATGGTTCAACGGATGATGAAGAAGCTCTACATGCAGCTTGTGGCCGAGTTTAAACGTCTTGGCTCAACTATTGTGTTTGCAAATCTTAGCAAGATAATCATTTGCACCAAGAAAAGAAGcataccagatgccaaggcATATGTGGATTTCATTCTCAAGAGTATCCATGCACGGGACTTGTTTCACAGTATTGAAATCAAAGCTGAATCATGCTGGGAGTATCTCATGTGGATGGACCAGGCTAATCATGGTGGGGTCAGAGGCAAGCTCCTCACTCAGAATATGGAAGACACACAAGATCTAGAGGATAGCAGTGATGAACTGATGGCTTCGCAAGACAATGAGCCAAAGGTGGAAATGAACTGGAACATCAAACAATATCTCCCAACTGCAGCATCCTGCCAGAACTATTTTCAGATTGTTATCGCCAGTCACATTCATGCCATGTATACCCGTTTAGTGGAGGAGAGACAACACATGGAACCCGGCAAAACtccaatcaagaaaagaacAAGTTCCCAGTCACAGCGGGTTGCAGAAACATCAGCCACGCCCAGCCTTGTCACCTTTGCTCAAGAAAGGATCTCAGGAGAACTTACTCAAACTCTTTTCTCTGTGACACAGAAAATACAGCACACGCTGTCTGGGGACAGGTCGTCAAACACTGACCCAAGTGGTGAGTTTCCACTTCTACCCGGATCACACCTTCCTCTGAATAATCCTGCTTTGGAATTTGTCAAGTTCATATGCAAGGCGTTATCACTTGATTCTAACACACAACACCAAGTTACCAAACTGAGGAGAGACTTATTAAGATTATTGGGGATAGGAGAGTTTTCAATGGAAGCAACTTTCAGGGATCCTTGTTCATCACTTGTTGTCCCAGAGGTACTGTAA

Transcript

ENSJQFT00000024905

GCAGAAATTTTCCTGTAAAATACAGCATTAGTGCAAGAAATCCTAAATGGATACAACATGTGCATTGTAATACACACATGAATTTGAGGCTGCCTGCAGAAAATGGCTCCAGAACTGCATCCCAGTACTTCACACCATGCAAAGAGAAGGCAAGCTACTTCCCCTAAAATTTGACAGCAGATTATTCCAGTGAAGTTTTTTTACTTTGCTGCTCTAAAAAACGACTGCAACTAAAAgtatatacatttctttcaaagcTATCATACATCTCAGTGGCCGTTTGGAATGACATGTTTAACGTGCCTGCAAGTCGCAATGAGTACCAAACCATTAAACAACAGCTGGAAGTAGAGAAAATTCCCGGAGTGAACACAGGGGATCCTCCACGATCCTTCCACTCACTGTCTATAGCTGAACAAGCTCAGATGGAGAAGAAGAGATTGCAAGATTATTGTCATAAAGCATACAAGAGAGTGCGCATGAGCAAGCAAGAGACCCGTCACACCATGATTTGCCAGCGAGAAAATTCCTTTTATGTGGACACCGTTAGAGCATTTCGTGACAGGCGGTATGAATTTAAAGGACTGTTAAAGGTTTGGAAACGTAAACTTGGGGCTGCAGTACAGAGTGGAGATGCAGATGAAATCAAAAGTTGCAAGAGCAAGGAGATTCTGTATGACTCTCTACAGCTGGCACATAAGTGTATTCTGAACTCATTTTATGGTTACGTCATGAGAAAAGGggcTCGGTGGTACTCAATGGAAATGGCTGGCATTGTGTGTCATACAGGGGCTAACATTATTAGACAGGCCAGAGAAATTGTAGAGCAAATTGgACGTCCTTTGGAACTTGACACTGATGGAATATGGTGCGTGTTACCAGCAAGTTTCCCAGAAAACTTTCAGGTTACCACCATAAATCCCAAGAAAAGCAAGGTGACGATTTCCTACCCTGGAGCAATGCTGAACATAATGGTCAAGAACCACTATACAAATGACCAGTACCATGAACTGACAGATGCAGATAACTTGACCTATGAAATACGCAGTGAGAACTCAATTTTTTTTgagGTTGATGGACCTTACAAAGCAATGATCCTTCCTGCTGCTaaagaagaaggaaagaaactaaagaaaagATATGCGGTGTTTAATGATGATGGCTCCTTGGCAGAACTGAAGGGATTTGAAGTCAAGCGTCGCGGTGAGCTGCAGCTAGTGAAGATATTCCAGTCTTCTGTATTTGAAGCTTTTCTTCATGGCACAACTTTGGAGGAAGTGTACACTGCTGTTGCTGGAGTAGCAAATTACTGGCTGGATGTACTTTATAGCAAAGCTGCAAACATGCCAGACAGCGAACTCTTTGAGTTGATCTCTGAGAACCGCAGTATGTCAAGAAAACTTGAggagtatgagggacaaaagtccaCATCAATCAGCACAGCAAGGAGGCTGGCAGAGTTCCTTGGTGACCAAATGGTTAAAGACAAAGGCTTGAGCTGCCGCTTTATCATTTCAAGAAAACCAGAGGGGTCTCCTGTCACAGAGAGAGCTATACCTCTGGCAATCTTCCAAACAGAGGAGAGTGTTAAAAAACATTACCTTCGACGATGGTTGAAGGACTCCTCCATGACCAATTTTGACATCAGAAACATATTGGACTGGCAGTATTACATTGAAAGGCTGTGTAGTGCCATTCAGAAGATAATAACAATTCCAGCTGCGTTGCAAGGGGTGAGTAACCCTGTCCCACGATGTGTCCATCCAGACTGGTTACACAAGAGACTACTGGAAAAGAATGATGTGTTCAAGCAGCAGAGAATCAATGAGATGTTTGCACCTCTCCCTAAGAAAAAGGCAGCATTTGTTCAAGAACAGCAAAATGGAGAAAACCTTCCTTGTAACCAGTCTGAAGACATTGAAGACATTGCTGGCAAAGAATCATCTTCACTGGGACGACCTGTGGCCACGAAACGAAAGCGTGGACAGTTAACATTAGGTTCCTGTTCCCATAATGATGACAGACAAACGTTATCACAACCAGGTGATGGACAGCTGTCACAGACATGGAGAGAGGTTCTCGGAGAACCGCCTAAGTGGGGCCCAAGCAAGGAAGACAAGGAGAGATGGCTTGAATTCCAGAAGAAAAAGTGGAATTTCCAGTCCAAGCAGCGGGTAGAGAGGAAGCGACTTCGCAAGGAAGCAGACAGCATGGGTATCAGCACAATGGTGACGGGGCGTGGTCCATCTACAGGCCTCTCTCACTTTATGAGACAACAAGCGAGGTCTCTAGTTGACACACCTTGGCAGATAATACAGTTGGCAGAGACTGACACTCCGGGATTGTTTAAAGTGTGGGCAGTTGTAGGATCAGATCTGCACTGCATCAAAGTTAATGTCCCAAGGATTTTCTATGTGAATTGCCACACTCCCAAAGAAGGATCTGGAACAACTTGGAGGAAGGTTTCACGAACATTGCCACGTTCTCATACTGCACTTCATCTATATGAGTATACAGTCCCTGAAAAGATATTTAGGAATCATTCTAGTGAGTTGGCCACTGATCTCTCATCACCAGACATTGAAGGGATATATGAATCTCAAGTTCCTTTGTCTGTGAGAGCAATGATCAAACTTGGCTGTGTTTGTAAAGTCAACAAGACTTTTGCACGGCTTTTCAGTGGCAAGGATATGGACACCTTTGAGCTAGATCAACTGGAGTTCAAGACCCTTGCCGAGTGTTCCTATCTAGAAAATGTCAATGTGAAGCAAATATACTTCTACCACAGTTCCTCGGACAACCGTGTGGTTCTTGGTGTCTTTATTCCTGCCTCTCGAAAGGCATCTGTCTTTGTGATTGATGTTGTGAGAAACAATCAAATGCCAAACTTGTCATCTTTGTACCAATCTGAGAGAACTGCTAGGATACAAAGTGAAGGAGACGAAAGTTCCCTGCCTCCAGAGCATCACACATTTGACGTAAGGGTTGATACTGATCCAAGACAGGCCTACAGAGCCATTCAGAGATTCCTTGTCAATTACAGAGAAGAGAAGCGTGGACCTACCATGATTCTTGTGCAGTCACCCTGGGATCTTTGTCACCTTACATCATCTCTACCTGGTCTACAAGAATTTCCACTGGTCTGTCTTCCTTACAATGACAGTGATGCTCAACACAACATTCTTGATTGGCAACGACATGCTGCAAGAAGGATGATCCATCACtaccttgttgctgctgcatttTATGAGGCACAGTTGGAACTTGCACAATATTTCCATGTTCCAGTGGGGAACATTCCTCCTGATCCCACCCTTTTTGCTGCTGACCTTTTCTATGCCCGTCACCTTCAAAAACACAACCACCTGTTGTGGATGTCACCTACACATCGACCTGACCTTGGTGGAAAGGAAGATGATGATAACAGGCTCAGTGTTATTACTGAGGAGGGAGCAAGTATTGAGGTTAATAACTCAGGCTGCTATCCTACAGTCTGCATAGAGTTATCCATTGATTGTTTCGCTGTTAACACTGTGCTACAGTCTGCTCATATCAATGACTTTGAGGGTGGATCGGTATCTGCTGTCAGTTTTGACAGCTTGCCTCAGGCTTCCCTGGAAGAATTGGTTCAGGGGCTTCCAAGTGCTGCATCTGCTGGGTTGACAACATACGATGAAGCTGCATTGTGCTCTAATGCTTTCAGAATCCTTAAAGGAATGGTTCACAGCTGGTTACATGAAGTGTCTACCTATGGAAACTTGAAAGCTGATGCGCAGTTAATGCACTTCTACCGGTGGCTTTCCTCACCTTCTGCCCTTCTGTATGATCCAGCACTGTGTCGCATGGTTCAACGGATGATGAAGAAGCTCTACATGCAGCTTGTGGCCGAGTTTAAACGTCTTGGCTCAACTATTGTGTTTGCAAATCTTAGCAAGATAATCATTTGCACCAAGAAAAGAAGcataccagatgccaaggcATATGTGGATTTCATTCTCAAGAGTATCCATGCACGGGACTTGTTTCACAGTATTGAAATCAAAGCTGAATCATGCTGGGAGTATCTCATGTGGATGGACCAGGCTAATCATGGTGGGGTCAGAGGCAAGCTCCTCACTCAGAATATGGAAGACACACAAGATCTAGAGGATAGCAGTGATGAACTGATGGCTTCGCAAGACAATGAGCCAAAGGTGGAAATGAACTGGAACATCAAACAATATCTCCCAACTGCAGCATCCTGCCAGAACTATTTTCAGATTGTTATCGCCAGTCACATTCATGCCATGTATACCCGTTTAGTGGAGGAGAGACAACACATGGAACCCGGCAAAACtccaatcaagaaaagaacAAGTTCCCAGTCACAGCGGGTTGCAGAAACATCAGCCACGCCCAGCCTTGTCACCTTTGCTCAAGAAAGGATCTCAGGAGAACTTACTCAAACTCTTTTCTCTGTGACACAGAAAATACAGCACACGCTGTCTGGGGACAGGTCGTCAAACACTGACCCAAGTGGTGAGTTTCCACTTCTACCCGGATCACACCTTCCTCTGAATAATCCTGCTTTGGAATTTGTCAAGTTCATATGCAAGGCGTTATCACTTGATTCTAACACACAACACCAAGTTACCAAACTGAGGAGAGACTTATTAAGATTATTGGGGATAGGAGAGTTTTCAATGGAAGCAACTTTCAGGGATCCTTGTTCATCACTTGTTGTCCCAGAGGTACTGTAAGCAAATGTTACAGATGAGGTAACCAATCATTTTGCTGCTGGTAAATTTGCAATCGTCATGCAGGCTAACCTCTACGTTGGGGGagttagtttggaaagaaactgtgtgctgcattggtgaaaCGACCACAATGGcgataaagtaagttagccACCACAAAATATTTTAAGGCCAATGTCTCCAGCTGAAGCCCTTCAGTCACTCTTACAAAGAGCcaattaaagctcgaaacatctgagtctttgaatcttttttaccgtgactaatttactttagtataacCTCTACATTGGTTTTGGTCACACTACATGTATATACAGTGAAACATTCTGTGTGTGACTGCAATGCAATACGGCTAAAGAGCCCACTTTAAAGTGTTCAATAAAGTAGGATTTAATGCAAGCTCTCTAAATGCTCCTTCCGCAAATCATTCTAAGTTGCAAGTACACGTATTCTAGTATGATCTTCTTTCATTACATGATGACACTTACAGCAGCTTTTCCCTTGTTTATAATGATCAACAACAACCTTTTCATGCATGCAGAGTTTGTGGTGATTATTAACCAGCAGTTTGGAGACAAATTTGATGAGTAAAATATGTGAATTCAAAGCCATAGCAATAATAAGCTAGTGTTCGTAAACAGAGTTCATTGAAGTTCAAGAAATGATTTTGCTATAATTATAGCAAACTTTTGacacttttttttgtttgtttgttgctaggTTATTTGTCTGTTCTGTAACTCATGCCGTGACCTTGACTTATGTAGAGACCCATTCATAACTGAAGAAGAAGGAAACAGTCG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08490 all species →	DUF1744	Domain of unknown function (DUF1744)	Domain	Interproscan
PF00136 all species →	DNA_pol_B	DNA polymerase family B	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029703 all species →	Family	DNA polymerase epsilon catalytic subunit	Interproscan
IPR013697 all species →	Domain	DNA polymerase epsilon, catalytic subunit A, C-terminal	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR006134 all species →	Domain	DNA-directed DNA polymerase, family B, multifunctional domain	Interproscan
IPR042087 all species →	Homologous_superfamily	DNA polymerase family B, thumb domain	Interproscan
IPR023211 all species →	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10670 all species →	DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0006272 all species →	Biological Process	leading strand elongation	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006287 all species →	Biological Process	base-excision repair, gap-filling	Interproscan
GO:0006297 all species →	Biological Process	nucleotide-excision repair, DNA gap filling	Interproscan
GO:0008310 all species →	Molecular Function	single-stranded DNA 3'-5' DNA exonuclease activity	Interproscan
GO:0008622 all species →	Cellular Component	epsilon DNA polymerase complex	Interproscan
GO:0045004 all species →	Biological Process	DNA replication proofreading	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000023958.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.