Gene detail

Detailed information of ENSJQFP00000024161.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

ENSJQFT00000025110

ATGGCTCCCCTAACAGGAACTGTCGCTGAAGAAGGTTTCTGGGGAGCAGCgacttcaacgattgattggtGCGAGGAGAATTATCTTGTAACAAAATACCTGGCGGAGTTTTGGAACACTATCAGCAACTGGTTGTTTATGATTCCACCATTTTTTGGAGCATTGTTAGCATGGCAGAACAAGCTGGAGAAACGTTacatcatttcatttatttcactATGTGTTGTTGGAATAGGATCTCTTTGTTTTCACGCTACACTATTGTATGAAATGCAGCTGCTAGATGAACTTCCAATGATCTATGGTACATGTATTTTCATATATTGCATttttgagTGTTCATATCAACCACAGCATCATGAAACAACCCTTCTATTAGCTCTCACTGTCACTTGCGCTATGGTTACACTGGTTTATTTGACTATTGTCAACCCTCTTATATTTCAGTGGGCATATGGTCTTCTTGTTGCTATACTGATTGTTTTGTCAGTCAAGGCCTGCAGGAAATACAAAGGTTCTTGGCAGCTCTTGGGTATCTCATTTGTCAGCTATTCAATTGGATTTATCTTGTGGAATATAGACAATAATTTCTGTCCCAAAGTGAGGGAAATACGAAATGCATTGTCTCCACTTCTGATACCATTTTTGCAGCTTCATGCAGTCTGGCACATGTTAGCTGGTATTGGGTCTTACTACCATGTTCTTTTCAGtgTTGACTTACGTTTGCGGTGTCTTTGTAGAGCTCCATACTTGAAGATGTCTCATCGATTCCTGCCATTTGTTTATCCTGGAGAGAAAGGTCCTCCAGAAATGTTCCAGTCGGTTGCACACAAGGCAGCAATTTTTGTTCTACTTTGTGCTTATGAAGATCCGAGGATTTTTCGTTCTGGCTTATATGACACTCTACCCTCTGTTGTTATGGCGGGGGAAACGGCATCTGTCTCAAAGGGCTGCTTTCTTATCAAGAAAGCAGGGAGCAGTTCACCAAGAAAACGTCTACTTGAGGACTTATTTCCAGAAGTAGATGGAGAAACCATTGCCCATCGGAAACTCAGATATGCCAACTACAATTCTTGTTGGAGCAGCTTTAAGCATGAAATTGAGAAATTACAGGGTGAGATGAACAGCAAAATATTTTCAGATCTATTGGGCTACATCAAGAGGGCACGGAGATCAGAGTTGGCATGTAAAGATAGTTCTGCAGTCATACAAGAAATGCCCACAGCAGCACTTATTACTGGTGTCAACATGCCAGACCATGATGGGGTCTTTTCGCAGCTGGAAAGAGAACTTAAACAGCAGATTACACCGTATGTGGCCTTGCTTAGGTCCAAAGATTGTACAGCTATGAAAGCAACAATGAAAAGCATGATTTTGCAATTCATCGGCTGTGATGTGCAAGATGAAGATGATTTGCCATTGGAACAACCTTCTAAGACAATCTCTGCATTTACAATGCCTGTCCTGTGTCACTGGTACAAGAAAATGACCCAGGTTGATTCCTCTAAAAAGAGATGCAGCACTCAAATTCCTCAATGTCAAGACCGTCCTCCACTGGTTGTCATCTTTGAGGACTTTGAAGGGTTTCCGCCATCTGTGGTTCAAGATTTTGTGTTGATTTGCAGTCAGTACTTGTCAGATCTTCCCATGGTTCTTGTGTTTGGTATTGCAACATCCATTGCAACCATCCACAAGGTTCTTCCTCACACAGTTTCTAGTGTGCTCTCCATTGAAAGGTTCCAGGCACACCCATCGCACACCTGTCTACTGGAAATCATTGACAAGGTTTTGATGACACCAAAGTTTGCTTTTAAGCTTGGGCCAAGGGTGTTTAGATTTTTGTGTGACAATTTTCTATTCTATGATTTTTCACTGCAAAGTTTTGCCAGGGGACTACAGtTCTGTATGATGGAGCATTTTTATGAGAATCCCCTGAGTGTGATGTGCTGTGTTTTACCAGAGGAGAGGAAGGAGATTCTCAACAAGATGACTCACAAACAAGTAGAGAAGTTAAGAAGAACAATGTCATTCCGCAGATATGTTGAAGGAGAACCACCTTCAAGACAACCTCTTCTCTTGCTGGATGATTTATTCACGAAGGATGCAGTAGCTGCACTGTTAGAGGATCTAGACACATACCACTGGTGTTTCTTTCCCATTCTAAAGTGTCTTCATTTGCTGACGGCCAATCTTCCCCGGTACCCTCTTGGGAAAAAGCTCTGCAATGTCTATGAACTCAGCCTCTCAGGTGCCATCTACAACCTAGAGGAATACAAGGAAGCTATGTCTCTTTTAAGAGTCTGCTCCAAAGATGAACTCCATCCTCTGTTACAAGAATGTCTCAATGTGTTAGAAGCCGTTTTGGAAAGTTCAGATGCACCAAGATACTGCAAAGCACTTGAGGAACCAAGAGATGTGATTGATGGACTTATAAGTCAGTTTAACAATCTAAACGAGATCCCAGAGAATCAAGTGCCCATTGTTCCAGGTGGCGAAGTTGTTTCACGTTATGCAAGTCGATTTCAGCTTCAAGAGAAACTCCTGAGTGTAGCAAAGcaaaagaggaaagaatcccCTTATGACAAACTACGTCAGAAAGCAGTGGACTTTATAGACCAAATATTCAGAACATTCTTGACTTCTCCCCGTGACATACCGCTGAATGAGGTTATGTACTTTGACAACGTTCACAAGCTCAGACAGCACCTTGTGGGAATGCCTCGTGTTGCTATCCAAACAGCTCTAAGTAACCCACAACATTATCTAAAGTGTGGCTGCTGCCAGATAGATGTTGGTACAGTGCAGGACACTTTACCAGACATTTGTATAGCATACAAACTTCACCTGGAGTGTGGTAGACTCATAAATCTCTATGACTGGCTTCAGGCATTTACAGCTGTTTTAGACCCACAGTTAGGACAAAGATCTACTAAGGGTTCTCcaaagaagaaaatgaaaacaaatgatCAACTGCAGTATCCTTTGCTATTTGTATTTTTCTAG

Transcript

ENSJQFT00000025110

GTGATATACTCCTCTGACCACTATTGCTTTGGCTACAGGAACAGAAAAATGAtgaataaaatattaaaatattcaTTTCGTTCTGTTGCGTTAACGAGATGTTCTCAGATGTTAGGGGATGTGATCGTTGCAGGTGTGCAATTACACTTTAAAGCGGCGTCTCCTCACCGTTTCCAATATTTATCATGGCTCCCCTAACAGGAACTGTCGCTGAAGAAGGTTTCTGGGGAGCAGCgacttcaacgattgattggtGCGAGGAGAATTATCTTGTAACAAAATACCTGGCGGAGTTTTGGAACACTATCAGCAACTGGTTGTTTATGATTCCACCATTTTTTGGAGCATTGTTAGCATGGCAGAACAAGCTGGAGAAACGTTacatcatttcatttatttcactATGTGTTGTTGGAATAGGATCTCTTTGTTTTCACGCTACACTATTGTATGAAATGCAGCTGCTAGATGAACTTCCAATGATCTATGGTACATGTATTTTCATATATTGCATttttgagTGTTCATATCAACCACAGCATCATGAAACAACCCTTCTATTAGCTCTCACTGTCACTTGCGCTATGGTTACACTGGTTTATTTGACTATTGTCAACCCTCTTATATTTCAGTGGGCATATGGTCTTCTTGTTGCTATACTGATTGTTTTGTCAGTCAAGGCCTGCAGGAAATACAAAGGTTCTTGGCAGCTCTTGGGTATCTCATTTGTCAGCTATTCAATTGGATTTATCTTGTGGAATATAGACAATAATTTCTGTCCCAAAGTGAGGGAAATACGAAATGCATTGTCTCCACTTCTGATACCATTTTTGCAGCTTCATGCAGTCTGGCACATGTTAGCTGGTATTGGGTCTTACTACCATGTTCTTTTCAGtgTTGACTTACGTTTGCGGTGTCTTTGTAGAGCTCCATACTTGAAGATGTCTCATCGATTCCTGCCATTTGTTTATCCTGGAGAGAAAGGTCCTCCAGAAATGTTCCAGTCGGTTGCACACAAGGCAGCAATTTTTGTTCTACTTTGTGCTTATGAAGATCCGAGGATTTTTCGTTCTGGCTTATATGACACTCTACCCTCTGTTGTTATGGCGGGGGAAACGGCATCTGTCTCAAAGGGCTGCTTTCTTATCAAGAAAGCAGGGAGCAGTTCACCAAGAAAACGTCTACTTGAGGACTTATTTCCAGAAGTAGATGGAGAAACCATTGCCCATCGGAAACTCAGATATGCCAACTACAATTCTTGTTGGAGCAGCTTTAAGCATGAAATTGAGAAATTACAGGGTGAGATGAACAGCAAAATATTTTCAGATCTATTGGGCTACATCAAGAGGGCACGGAGATCAGAGTTGGCATGTAAAGATAGTTCTGCAGTCATACAAGAAATGCCCACAGCAGCACTTATTACTGGTGTCAACATGCCAGACCATGATGGGGTCTTTTCGCAGCTGGAAAGAGAACTTAAACAGCAGATTACACCGTATGTGGCCTTGCTTAGGTCCAAAGATTGTACAGCTATGAAAGCAACAATGAAAAGCATGATTTTGCAATTCATCGGCTGTGATGTGCAAGATGAAGATGATTTGCCATTGGAACAACCTTCTAAGACAATCTCTGCATTTACAATGCCTGTCCTGTGTCACTGGTACAAGAAAATGACCCAGGTTGATTCCTCTAAAAAGAGATGCAGCACTCAAATTCCTCAATGTCAAGACCGTCCTCCACTGGTTGTCATCTTTGAGGACTTTGAAGGGTTTCCGCCATCTGTGGTTCAAGATTTTGTGTTGATTTGCAGTCAGTACTTGTCAGATCTTCCCATGGTTCTTGTGTTTGGTATTGCAACATCCATTGCAACCATCCACAAGGTTCTTCCTCACACAGTTTCTAGTGTGCTCTCCATTGAAAGGTTCCAGGCACACCCATCGCACACCTGTCTACTGGAAATCATTGACAAGGTTTTGATGACACCAAAGTTTGCTTTTAAGCTTGGGCCAAGGGTGTTTAGATTTTTGTGTGACAATTTTCTATTCTATGATTTTTCACTGCAAAGTTTTGCCAGGGGACTACAGtTCTGTATGATGGAGCATTTTTATGAGAATCCCCTGAGTGTGATGTGCTGTGTTTTACCAGAGGAGAGGAAGGAGATTCTCAACAAGATGACTCACAAACAAGTAGAGAAGTTAAGAAGAACAATGTCATTCCGCAGATATGTTGAAGGAGAACCACCTTCAAGACAACCTCTTCTCTTGCTGGATGATTTATTCACGAAGGATGCAGTAGCTGCACTGTTAGAGGATCTAGACACATACCACTGGTGTTTCTTTCCCATTCTAAAGTGTCTTCATTTGCTGACGGCCAATCTTCCCCGGTACCCTCTTGGGAAAAAGCTCTGCAATGTCTATGAACTCAGCCTCTCAGGTGCCATCTACAACCTAGAGGAATACAAGGAAGCTATGTCTCTTTTAAGAGTCTGCTCCAAAGATGAACTCCATCCTCTGTTACAAGAATGTCTCAATGTGTTAGAAGCCGTTTTGGAAAGTTCAGATGCACCAAGATACTGCAAAGCACTTGAGGAACCAAGAGATGTGATTGATGGACTTATAAGTCAGTTTAACAATCTAAACGAGATCCCAGAGAATCAAGTGCCCATTGTTCCAGGTGGCGAAGTTGTTTCACGTTATGCAAGTCGATTTCAGCTTCAAGAGAAACTCCTGAGTGTAGCAAAGcaaaagaggaaagaatcccCTTATGACAAACTACGTCAGAAAGCAGTGGACTTTATAGACCAAATATTCAGAACATTCTTGACTTCTCCCCGTGACATACCGCTGAATGAGGTTATGTACTTTGACAACGTTCACAAGCTCAGACAGCACCTTGTGGGAATGCCTCGTGTTGCTATCCAAACAGCTCTAAGTAACCCACAACATTATCTAAAGTGTGGCTGCTGCCAGATAGATGTTGGTACAGTGCAGGACACTTTACCAGACATTTGTATAGCATACAAACTTCACCTGGAGTGTGGTAGACTCATAAATCTCTATGACTGGCTTCAGGCATTTACAGCTGTTTTAGACCCACAGTTAGGACAAAGATCTACTAAGGGTTCTCcaaagaagaaaatgaaaacaaatgatCAACTGCAGTATCCTTTGCTATTTGTATTTTTCTAGCCATTTACAATATTTGCAAGGTAGTTTCAATAAGTGATTAGTAAAGGTAAAGAAGTGCAACTATTGTTTAAACCGCATTGGTTGTACGTATGTGGTGATTAAAAGAATTCAATAGTAAAACGGAGCCCTAATACCATAATGAACCAACAGTACCATTAACCATTTGAGATTGTTTTAGAATAACCAAGTGATGATTCtttgagacaaaaaaaaaaaggtttcatCTCCATGAAATGTGAGTTTCAAGCTGTTTTCACTTCCTGTTGTCATCTACCAATCGTTGGTCAGCTTTGATGCAGCAATTATGTCCTTGACGAATATGGTTGGCAAGGTAAATGCTCCTGAAGCAGAAATAAGAgatttagtacaaaatggtgTGATCTAATTGattcaaacaaaattatagCTCCTTTTTTTCTGCACCATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18137 all species →	ORC_WH_C	Origin recognition complex winged helix C-terminal	Domain	Interproscan
PF19675 all species →	ORC3_ins	Origin recognition complex subunit 3 insertion domain	Family	Interproscan
PF05875 all species →	Ceramidase	Ceramidase	Family	Interproscan
PF07034 all species →	ORC3_N	Origin recognition complex (ORC) subunit 3 N-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040855 all species →	Domain	Origin recognition complex subunit 3, winged helix C-terminal	Interproscan
IPR045663 all species →	Domain	Origin recognition complex subunit 3, insertion domain	Interproscan
IPR008901 all species →	Family	Alkaline ceramidase	Interproscan
IPR020795 all species →	Family	Origin recognition complex, subunit 3	Interproscan
IPR045667 all species →	Domain	Origin recognition complex subunit 3, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12748 all species →	ORIGIN RECOGNITION COMPLEX SUBUNIT 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006672 all species →	Biological Process	ceramide metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016811 all species →	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003688 all species →	Molecular Function	DNA replication origin binding	Interproscan
GO:0005656 all species →	Cellular Component	nuclear pre-replicative complex	Interproscan
GO:0005664 all species →	Cellular Component	nuclear origin of replication recognition complex	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0006270 all species →	Biological Process	DNA replication initiation	Interproscan
GO:0031261 all species →	Cellular Component	DNA replication preinitiation complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02605	ORC3; origin recognition complex subunit 3	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.