Gene detail

Detailed information of ENSJQFP00000024437.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000025391

GTTGGAAGCAAAACAATGTAAACACCCCCGGCGATTAGTCATTCACCTCTAGCGTTTCTACATGCTCTGGAAAGATCTCCTCCTCGGAGTTTGCTCGCAGTTGGAGGCTCAGACGGTGCTATAGGTCGTTTTAGTGGATCAGAGTTAGAACAGAATTTTATTAGACGTCCATCAAAAGCACGGAAAATTTGCAGATATGGGCGTCGGAACGCGCTCTTCTGTCCAGAAAAGTAAAGAGGAGGAAGAACTGAAAGCAAAAATGGCTTCCAAAGTTGACGCCGAGACTCAAACCGATCCAGAGATAACTGGCGTCGACGCGGACGACTTCGAAGAAGAGGAGTCGGAAACGGAAAGCAGCGAAGGCGAAGATGAAGTAGAGCCAGCTACAGACAACAGCCAAGCGAAGCGTGTCGATAAAGGGACGTCGTCCAAACCTGTTCGTCGTAAAATAATCGAGTTGAAATATTATTTTGGAGAAGATTTGCCAGATGCTGAGCTCACCAAACTTGCTGAAGCTGAGGTAATTGTCCCACCTGGGCTAGAAATAAAGGATTCCAATATTCCTACAGCTGGCAGAGGGGTTTTTGCTAAGTGTGTCATTCCCAAGCATGACTTTTTTGGCCCTTATGTGGGCACGAAAATCACTGCCGAGGAAGCGAAAAACTACAAAGACTCGCCATATGTGTGGGAGGTGCGAGATGACTATGGTAAATTGATGCATCTGGTGGATGGTCGTGACGCTTTCCAATCTAACTGGCTGCGCTATGTTAATTGTGCATGTAGCTCTGAGGACCAGAATATCCGTGCAGTGCAGTATGATGGAAACATTTACTACATGGCAACAAAACAGGTTGAGTTAGGAGAAGAGCTCTTAACATTCTATGGTGAGAAGTTTGCCAAGAAACTTGGTATCAAAACTTCCAAGAAGGGAACATCTAATAGACCAGAGGATGAAAGCTTTGCTTGCAAGAACTGTGGGAAAATGTACAGTAATCCTGCCTCACTGATCGGCCATCTTAAGTACAAGTGCAATACTGGACAACAGAGAAGCATCTTTGTCCCACAACCCACTGGCCCCCGTGCTGCAATCCCAAAGATCAAGATCACAGAGGAGTATGCACGTCAGCAAAATGAAAAGCTAAAGAAGTTCAAGTGCGACGAGTGTGGCAAGGCATTTATTCGTAACTACACTCTCCAGTGTCACAAGTTGATCCATACTGGTGTAAAGGAACACAAGTGTGAGGAGTGTGGGAAAGAGTTCACGCTGGTGAAGCACCTTCAGCGTCACCAACTTGTGCATACCGGTGAGAAGCCCTACAAATGTCACCTGTGCGGTCGCTCATTTTCTCAACAGGGCAGTCTGCAGGCACATAGCCGCACGCACACTGGTGTAAAGCCATACTCGTGTAAGATATGTGGACGAGCTTTTGCTCTACAGTCACCACTCTTGTCCCACATGAGAACACATAGTGACGAAAAGGCCTTCAAGTGTGACACATGCGGAAAGGCATTCACACACAGAAATACCTTGTCAAGGCATGAGCTCATTCATACTGGCGTCCGACCATTCAAGTGTGACAAATGTGGCAAAACCTTCACCCAGACAAATGATCTCAAACGTCACAGTCGCATCCACACTGGTCTCCGTCCATACAAGTGCCACATCTGTGGCAAAGCTTTCACTGTGGAGTTTACCCTGGTTTGTCATGTACGTACCCATACAGGTGTGCGGCCATACAAGTGTGACTACTGTGACAAAACATTCACCCAGCCTGGAGCTCGGCTGAAGCATGTGCGTAAAAGCCATCCAGGTCAACCAATGCCTAGTAAGGAGACAAGCACTTCAACCACTAACAAAGAATCGATGGTAGTTGACACCAACAGTGAAGTTTCATCTTCCAATAACGATGGCAATGTTGAAGTAATCAAAGCTGCTAATGGTAGTAAGGAACCTTGTCCTGCCAGCAGTGATGATCAAACATCTGTCTCTGCATAAAGTGCAATTACTTATCCGGTATACCAACAAAAAGATATGCAATCAGAACATCTGTTCTCTAACTCTGTCCAAAATTCATGCTTGAGAACATTGTCCAATTGATGGTTGGAATATTTCCCCTCAAGCAATGTTGGAGagaagtttaacccttttaccccTTGACCACGCCAAGTCCACtggattgaaattgaaaaacaaacagcagttgagtaaagtactgctcaacaactgctttccaatgaatggtcacaattaagggttctgtccatagaatcaaaatttataaaagtttgtttcaccaaaggtttcactctgagagtcatagGGTTAACTGGGTGCCTGTTTACACATCTAGGAATTTTTGGGAAATGATCCCtcagtcaattcttctatttttgtgtttaactTGTATGTATTAACTTGCAATTAAACAGACAACTTTATGTTGCTGAAAGAAAAAGTAATTGATCATCCACAGGAGACCTAAAAATGTGCACAATTTTAGAATATTTTATATAGACCCACTAAGAAGCCCAGGAGAACAAAACCAGATGTCATAATTAAAAGGCACATGTAGATTTCAGTGCAGATAAATTTAATTATGTTCAGCCTAGATCAAgctcaaaatcaaacaaaccagtaaaatttgtttcaaattgGCACCATGTTTAAATAGTGATAGTACAATAGCAGATCCTCAGCAGATAAACCACACACAAGCCACAATCCCTTGactgtggctgatttaccttgtttgctttgtattgataatttgtgattttggtgtttcactctaAATATCTAGTACTACTAGTCAACACAATTTTAACGGTAGCATATTTCGCATGAGTGCTGCTCAAGTTGATTAGGTGTCTTTTCAATTTCATATATTGGAAATGATCCTAATCAAGTAAAAATTATTGTTGCATGCATGATGTTCACTAGATATACGGTAGCCATTTTGAAAAACTGGTCTTAAAAATGGCTATGTTTGACATT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR050717 all species →	Family	C2H2-type Zinc-Finger Transcription Regulators	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR044417 all species →	Domain	PRDM7/PRDM9, PR/SET domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14196 all species →	ODD-SKIPPED - RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001655 all species →	Biological Process	urogenital system development	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0009790 all species →	Biological Process	embryo development	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0042054 all species →	Molecular Function	histone methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20796	PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9	EC:2.1.1.354	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.