Gene detail

Detailed information of ENSJQFP00000024465.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000025419

ATGGACGACGACGTGGAAGTTGAGGACTTTGAGATCACCGATTACGACCTCATGCAAGGATTTGGACTGGGGTTTAGAAGGCGAAGAATGACCAAAGAAGAGGCAATTTATGGTATGTGGGCAGACAAGGACTCTGACGATGAAGGCCCATCAGGATATTcaggaagaagaaagaaagactaCACCAAACCTTTGAATTTTGTCAGTGGAGGAATTGTTCAGAAGGGAAAGGACAAGAAAAATACAGAAAGTGTTGGAAGCAGTGGAAGTGATAAAGGGGCTCTGTCTGGTTCAGCTTCTCCAGTTGTTAGAGATAGGAAGCTTTTTAAAAGCACTGGCCTCTCCAAAAGTGAATTTGGCTCTCTTGGGCTACAGGCAAGTCAAAAGATGTTTGAGGAATACACTATGGGTTACCAGCCAGGTAAAGGTCTGGGTAAAGATGGTAAAGGAATAGTGCTCCCTGTTGAAGCATTTAAACGTGAAGGTCGTGGAGCACTAGGTAGCTATGGCCCTGAGAGAAGCAAGCAGGCACAAGAGCTAAGACCACATtatgacgaagaagaagaagaagaacaagaattTAAAGAAGAACTGCAGCAGTGGAAGAGAACAGAAGAGGTGGAcaacataatattatttttgtACATCCTTGTGACTTGTGGTATGAAATTGCACCAatctagttttGTGGTAGATATGACAGGACCAGAGACAAAAATCCTCACTGGTTACGGCTCCCTCACTCAGCAGCATGCAAAACCAGGCGAAGTCCCTCCCACAACATCAGTCAAAGATGCCGAGGCCACTTTTGCCATGCCAGAATTGGTGTACAACATAAACCTTCTCATTGACATGGCTGAATCGGAAATcatacagacagacagacaATTGAAATATGAGCAAGACCTTCTGGTTAACTTGAAGTATGAGGAGGAGAAACTTACATCTTTGTTGGAACAAGAGGAGCAAGACATCAAGAGATTGATAAAtTACATTGATCTGGATTTATCCAGGTGCAGGCAACAGTCCCTGTCATCAGATGATGATGCCCTCACACTTGACCAATGCGAACAAGTGTTCAACACTTTACAGGAAGATTATTATGAGGAATTCAAGATGTATGATTTGGCATCTCTGGCTGAGCCTCTTGTATTCTCCTTGTTGAGGCGTCATTTTGAGGGGTGGCAACCTCTATCTGACCCAAGCCACGGAGTGGAGGTGATGAACAGATGGCGTGATCTGCTGCAGAAGAAAGAGAATTCTGTATTCACGCAGACACTTTCACAAGGAGTTAGTCACGGTGATAAAGGTATGAAGATGTATGATCACCTTGTGTGGGAGGTCTGGATGCCATTTCTTCGCTCCACCGTCTGTGCCTGGAATTGCCGAGACAGCGACCCAATGGTGACCTTGATAAATCACTGGATATCTCTCCTCCCCCCATGGATTTTAGACAACATCCGGGATCAGCTGATATTGCCACGCCTACAGGCGGAGGTTGACCTGTGGAATCCTCTGACCGACACTGTTCCGGTCCATGCCTGGATTCACCCCTGGCTTCCCATAATGGGAGAGCACCTTGAGCCGTTGTATGTTCCAATCAGATACAAGCTTGGCTCGGCCCTCACCAACTGGCACCCGTCTGATCCCTCGGCAAAAATGATCCTGGAACCTTGGACCAAGGTACGTATTCTTAACAgTATTCTCCAAAGGCACTATGGACGCTTTTATTTTACGCTCGATTTACCCCAAGCTGTCACAGTGCTTGGCAGAGTTTATCATAAATCCCCATCAGCAACATTTGGagccaTTCCACTGGGTGATGGAATGGAAAGACATCATAACTCAGCAACACTTCATCAGCCTGCTAGAAAAACATTTCTTTCCTCGTTGGATTCAGGTGGTTGTCAGTTGCCTGGCCAGTTTTGTTACGTTACAAGAAAGCAAAACCTGTTAACCGCTTCTCGTAACTTTTTTTGTTCCCTCTCCAGGTATTCAGGATGGAAAAGCATGTTCAGCGAAGATTTGCTCAACAACCAATCAGTTAAAGttcagttcaacCGTGCTCTCGACGTCATGAACCAGGCAGTGACGTCACCTGGTGGCTATCTTCAGCCTGGTGCCAGGGAAAACATTGCGTACCTCACCAGTACTGAGAGAAGGTCTgcCGAGGCGGCCCGAAATGTCGCCTCGCAGAATGTTCCTTCCAACTTCAAAGACCTCATACAGAAATTGGCGGAGGAAAATAACCTGCTTTTCATGCCGATTCCTAACCGGAGGTACGAGGGGAAGACTTTGTACTCCTTAGGTGACGTCACATTGTACATTGACCGTGGAGTTGTGTTTGTTCATAGCCAAGGAGTCTGGAAACCAGTCTCTCTTCAAGATCTCGTATTAATGGCGAAATAG

Transcript

ENSJQFT00000025419

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12457 all species →	TIP_N	Tuftelin interacting protein N terminal	Family	Interproscan
PF07842 all species →	GCFC	GC-rich sequence DNA-binding factor-like protein	Family	Interproscan
PF01585 all species →	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022159 all species →	Domain	Tuftelin interacting protein, N-terminal domain	Interproscan
IPR000467 all species →	Domain	G-patch domain	Interproscan
IPR022783 all species →	Domain	GCF, C-terminal	Interproscan
IPR024933 all species →	Family	Septin and tuftelin interacting protein	Interproscan
IPR045211 all species →	Family	TFP11/STIP/Ntr1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23329 all species →	TUFTELIN-INTERACTING PROTEIN 11-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000390 all species →	Biological Process	spliceosomal complex disassembly	Interproscan
GO:0071008 all species →	Cellular Component	U2-type post-mRNA release spliceosomal complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13103	TFIP11; tuftelin-interacting protein 11	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.