Gene detail

Detailed information of ENSJQFP00000024822.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02201 all species →	SWIB	SWIB/MDM2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036885 all species →	Homologous_superfamily	SWIB/MDM2 domain superfamily	Interproscan
IPR003121 all species →	Domain	SWIB/MDM2 domain	Interproscan
IPR019835 all species →	Domain	SWIB domain	Interproscan
IPR038041 all species →	Domain	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 1, SWIB domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13844 all species →	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016514 all species →	Cellular Component	SWI/SNF complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11650	SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.