Gene detail

Detailed information of ENSJQFP00000025988.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000026976

ATGATAGGGTGGAAAAGCACCAAAAATGCTTTGGAAAAACTTGAGAACCTATTGACGTGTAAAATTTGTGACAATCTTTTCTCCGATCCGTGTTCGCTTGAAGGCTGTGATCACAATTTCTGTCGTGACTGTGTTGAGAAGCAAGTTGGTGTTGATTCCAAATGCCCAGAATGCGGTGCCTTTGCATGGGTAAAAGACCTAAAAACCAATCGACAGCTGGTAAACACAGTCAATGCATGCGTCCGGCTCAGGTCTCTTGTAGGATCGCAAGATAGTGACAAGTTTGATATCAAGAGTGACGGTAATTTAATTACTGATACATTATGCATTATTAATATTGTCTATTCGTTTATTACCATACAATATTTGGATTCAACACCTGATGTTCGTCAATTTCCTACAACAGATGACGCCAGATGGAAACCAGTAAGTGGTTGCATCAGTGATGACTTTACACATGATGTTGATTTGGACAAAAACCTACAAACTCCAGCTTttgatgaaaaagaaacaacaaagaatCTTGACAACATCACCAGTGATGTTTTTGCAAAAAGCTTGAAGACTTACAGCAGAGCAGGATTAAAGAAGGAAATGAATGTTGACAGTACAAACAGTACACTTTGTAACAGCGAGTTGAAAGCTACTAAGAGAAAACAAGCTAATGAAAAGCATATTTGGAAACAGGCTAAGAAGAAAAGAGATTGGGCTGATGGAACAATATCTGTCTATCAACAGATAAAGCAATCTATTGATGAGAACTTACACTTTCAGTTTAATTCTAAAGATGAGAGAGTgaacaatgacagtgacaatttGTTCACAAACCTGAGGCCAAGACCAACAGGTACATGTTTCGATAAGAACTCAACTACCACCTTCAAGATAGGAGCCAGGCACTGTGATGGGGCAAAAGATTGTGTGTCAAAGTTTAGAGCTCAGAAGAGAACATGCGGGAACACACAGAGGTCATCTGAGGCCATAGAATATATGGAGCAAAACAAACCTGTTGGTGCAGGCAGGCAAAGTATTAGTAACGGACAAATGATGAACAAGACGACTGCTAaaATTTGTGAGACAAAACTGATTGCCAACTTTAATGGCATACATTTTCTCTGGTACCAATCTTATATCACAGAGTTTAAACATAATATTCATTTCTTGCAGGGTCATGTGGATACAGTCAGGAAGTTACTAGCAGATGGGGCTGATCCTAATACAAAGGACCATGCAGGATGGACTCCTTTGCATGAAGCTTGTAATCATGGTCATGTGACTATTGTGGAGTTGCTGTTGGACCACGGTGCTATGATTGACGTTCCTGGTGGATTTGACCATGATGTACCACTACATGATGCTGTTGCCAATGGAAGAGTGACAATAGCAAGACTCTTAGTTTCTCGTGGGGCTTCCCTTGATGCAAGAAACAAACAAGGGCTTTTTCCAAAGGATTATGCAGTGACAGAAGAAATGCAATTTGCTTTATCCAGTTCCCCTTCAAACAGAACCAAAGCACCCCTGGCAAAGAATTCATCTTCACAGTTGCTAAATGAAAGGGTGAGAATTCAATATGTTTTTCTCCTTTATTTGAATATTACTAtgtatgtttttcttttacaatCAGTGACTCACATTGTGACAGCTACAAATGAAAGAGGAGTTTGTCCTCGCACTATCAAGTATCTCAATGGCATATTAACGGGCAAATGGATTGTGGGCTTTGATTGGATATCAAAGTGCTTGAGACGGAAGATGTGGGTGCCAGAATCACTTTTTGAAATTAAAGGAACAAAAGATGCTATGGTTGAGGCACCAAAGCGAGCTCGGATTAATGTTTTAAAACAGCTACCAGGCCTTTTTGATGGGTGTCAGTTCTACTTTTATGGAGACTTTGTCCCACCCCACCCATCCAAAGATGACCTGTCACAGATGATCACTTACAGTGGTGGGAAAATACTTTCACGTGAACCTAAACCTGATATTGACGACACTCACCGTCCACTCCCTGGTACAAATATTTCACCGACAGTGGCATACCATGCACACTCAGAATTGAGGCAGTATCGTTGCACGCGTTATGTTGTGTATGATCCACTGGCAGAGAAGTCTCCTCATATTTGGTGCACTGATGAAGTCTGTACTGTTCCTTCTACCTGGATCATGGATTGTGCATCAAACTTCACAATTCTAGATTTTCCATCATGA

Transcript

ENSJQFT00000026976

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00533 all species →	BRCT	BRCA1 C Terminus (BRCT) domain	Family	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF14835 all species →	zf-RING_6	zf-RING of BARD1-type protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR001357 all species →	Domain	BRCT domain	Interproscan
IPR036420 all species →	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR039503 all species →	Domain	BARD1, Zinc finger, RING-type	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24171 all species →	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0031436 all species →	Cellular Component	BRCA1-BARD1 complex	Interproscan
GO:0070531 all species →	Cellular Component	BRCA1-A complex	Interproscan
GO:0085020 all species →	Biological Process	protein K6-linked ubiquitination	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000025988.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.