Gene detail

Detailed information of ENSJQFP00000028777.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

ENSJQFT00000029882

ATGGCGACCTTTCCAAAGAAATACCTTATTACTCAGTCGTGTTTGTACCTCCGAGCATTTTCAACAAGCGCTGGTTTGGAAGGTAGAAGTCATTATTCATTTGTTAGAGTTCCCCGTAGTATCGCAAACATGCCGATACCGAAGTCACTCCTAGATGGGACAGTACGACGTCACAAGGGACGTTCAGGTAGAAACGACACTGGTCGTATTGTCATAAGGCACCGTGGGGGAGGACATTCACAAAACTACCGCATCGTAGACTTCTTGAGGGCTCCAGTTACACGAAAGGGCGAAGAAGCAACGAGAATAAAGGACAAAGTGTTTAATATAGGCTATGATCCCTGCAGATCCGGAAGAATTGCGCTAGTTGCAGGGGATGGAGGTAATAAAATGAAGATTATAACAGCGCCCCATGAGATGAAGATTGGAGATGTAGTGACGGCCTCCAGAGGCAAACCAGAATCGATAGCCAAGTTGAAGCCGGGAGACGCGTACCCCCTGGAACATCTTCCAGTTGGTTCAGTGGTACATAACGTTGAATTGAGACCAGGAGGAGGAGCACAGCTCGTTAGATCAGCAGGGACATGCGCACAGCTGGTTcttaaaactgacaaaatggcTAAATTAAGACTTCCTTCCAAGAAAGAGAAGGCTGTCCCGCTGGGATGCATGGCTTCACTAGGAAGGGTTTCTAATATTGACCACAAAAACCGGATCATTGGTAAAGCAGGAAGAAACCGGTGGCTCAATAGAAGACCAAAAGGACAAACTGGAAAAGATCGTActttctggaaaaagaaaagaTGTTTCCACAAGTTTGGAAACAAGTACATTACTTTGAAAACTATCTTTCATGTTTCCCCCTTTCTATTTAGTGGAAATGAAGATAAttgcccCCAGGTCGACTTTTATAATATGGCGACTTTAGAGTCGCTAAACTTCGATAATTTAGCGCTTTGTTCCCTGCCAACTGATAAAGAAAGGAATAACTCCCCTAGAGAAGTGAAAGACGTCTGCTTCACTCTTGTGAATCAGTCACCAGTTTCTAATCCTCGTTTAGTGGCTTGCTCCTTCGACGCTCTAGCGTTACTGGATTTCCAACCATTAGAAGCCAGCAGACCGGATTTTGTGGAGTACTTTAGCGGAAATAAACGACTTCCTGGTTCTGAAACGGCCGCACACTGCTATTGCGGGTTTCAGTCCGGATATTTTTCAGGGCAGCTTGGAGATGGGGCTGCAATGTATCTTGGTGAAATTGTAAATACAAGAGGAGAAAGGTGGGAAATCCAATTGAAGGGGGCTGGCGTGACACCGTTTTCTTACACCCGAGATGGTAGAAAGGTTTTGAGGTCCAGCATTAGAGAGTTCCTGTGTAGTGAGGCAATGCATTACCTTGGAGTACCAACAATAAGAGCTGGCTGTTGTGTGACGTCAGACACTGTGGTCCTCAGAGACAAAGATTACAGTGGAATCCATGTTGAGGAAAGAGCATCCCTGGTATTGAGGATTTCTCCAACCTTTATCAGATTTGGTTCCTTTGAGATTTTCAAACCAGCTGACAGTTTGACTGGCTACTCTGGGCCAAGTGCTGGGCGCATTGATCTTCTTCATCAGCTACTTGAGTATACCATCAAGAACTTCTTCCCAGAAGTAATCATTTCAATGGTGTTTTTTTATCGCTACCTTGCATTTTACAAGAGGGTGATTCAATTGACGGCACAGCTTGTAGCTCAATGGCAGTGTGTTGGTTTCTGTCATGGTGTACTTAACACCGACAATATGAGCATTGTTGGGGTGACATTAGACTATGGACCATTTGGATTTATGGACTTTTATGATCCAAGCTATTTGAGTCAAGTATCTGATGTGTGTCTACGAAATTCAGTCAAAAAGCAGCCCGAGATCTGTAAATGGGATCTCTTGAAACTTGCAGAAGCCCTTCAAGTGGTGTTACCTCTTGAAAAATCCAGTGCCGCTTTGGAAGAGCTGTTTGATGCGGAATTTAACCGGTGTTTCACGACAAAAATAAGGCTAGTTTATTGGCTACTTTACAGGGACCTTATTCAATCACTGTTTGACACCATGGAGAAGACAGCTGCAGACTTCACTAATACCTTCCGATGTCTGAGCAGGATTTCACCAACAAACTGCAACGTTGGGCAGAGCGATGAAGATGTACTGGACTATCTTGTGTCCCAGTGTGTTTCTATTCAAGAATTAATCAAGGCGAGTTCAGTGACTTTAGAGCTGAGccaattgcttaaatttgttCGGATTGCATGGAAAACACGGCCTACCGTGGTAACACATCTAGAAAAAGAAGCAGAGAAATACCAGATAGAAAACGAGCGGCGCAAGAACAAAGTGGAGCGACTTAAGATGTCAACTCAAGCACAAAAGGAAGAAAGAACGTCTCAAGAACCCGCATTGCTTTTACCTTTGTTTTACAGATTTATTCTAAGAAACTATATCACTCAAAGAGCAATCGCGGCAGCTGAAAAAGGGGATTTCTCGGTGGTTCAGAAAATTTTCAAACGGCTTCAGACTCCCTACAGTGACACAGACGATGAGTCAAAGGAATTCACACTTACGTCACCAGAGGCTTGGAATCGTTCGCCTTGCCGTCAGAATGATGCGTCCGGAGCATACAGCGAAAAAACATCCAATGGCTGGCTTAACGTTTGTATCACCTGA

Transcript

ENSJQFT00000029882

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00181 all species →	Ribosomal_L2	Ribosomal Proteins L2, RNA binding domain	Domain	Interproscan
PF02696 all species →	SelO	Protein adenylyltransferase SelO	Family	Interproscan
PF03947 all species →	Ribosomal_L2_C	Ribosomal Proteins L2, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022669 all species →	Domain	Large ribosomal subunit protein uL2, C-terminal	Interproscan
IPR022666 all species →	Domain	Large ribosomal subunit protein uL2, RNA-binding domain	Interproscan
IPR005880 all species →	Family	Large ribosomal subunit protein uL2, bacterial/organellar-type	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR003846 all species →	Family	Protein adenylyltransferase SelO	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR002171 all species →	Family	Large ribosomal subunit protein uL2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12153 all species →	SELENOPROTEIN O	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000028777.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.