Gene detail

Detailed information of ENSJQFP00000030863.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

ENSJQFT00000032092

ATGGGGAAGAAACATAAGAGCAAGAAACATCACAAGAAAGGAGGAGATAATACAGATGCAGAGAAAGCAGAAAGGTTGGAGAGGGCCGAGAAGACTGAAAAACCAATCAAACTTGTGCTTAAAGTTGGTGGCAGTCAAGAAAAAGTGGCGTCCAAAAACCCACAAAACACCCCAAACAGATCAGCATCAAGCTTGGAAAGGATAAAAAGTAAAGATCATtcatcaaaaaagaaaaaaaagaaaaggtcctcatccaaagaaagaaagaaacccaAATTAGAgGGTTGTCACTCGCCATCATCTGTTAGTAGCCATGAAAAATCGAAGAAGAAACGTGACAGGCATGAAATGGAGGCAGAAGGTGTTGGTGTTGTTGAACCAGAACGATCAATAAAGAAAATCTACATCAAACCTATTGAACCTCCAGCAAGAAACATCCCAGAAACAAGAAAATTTTCTGGGCATGTAAAGGATCCAGAAGTGTCTCCACTTCAGCTGTGTCTGGAGAATATCCATCAGATGTTACAGAGgAAGGATACACAAGGCTTCTTTGCATATCCAGTGAATGACACCATAGCTCCAGGGTATTCAAACATTATCAGCAACCCAATGGATTTCAGCTTGATGAAATACAAAATTGATTCAAATGAGTATCGCTCCATAGAGCAATTCAGGGATGATTTTTACCTGATGTGCAACAATGCCATGATATATAATGCCCCAGAGACAATTTACTACAGAGCAGCTCGGAAGTTGATGCAGACAGGCGCAAGGATGCTGTCACTGGACAAAGTGAAGAGCATGTATCGCAGTATCGGTTATCCCGTCCCAGAATACGGGGGCTACGGATCCGAAGGACGTGGCTCAGATGAACCAATTGATGTTGACACTATTGAGATTGAAGAGAACCAAGCTCCAATGTCAGCAAAAAAGACAAAACCAAGAGGCGAGTCGAAGCAGACATCGGCCAGTCGAAAAATTCTTGCTCAAGTTCAAGAAGCGTCAAGAAGAGTTGCTGCGGAGCTTGAGGCTAAATACCTGAACAGCAAGATTGGTTTTCTTCGTCGCAGTAAGGATGGGACAACAACTTTAGCTGTTGTGAATCCAGACAACTCGGAAgTCCCAGAATACCTTGCTGTCAGCCTTGGTGCCGCAGCTGGTAAAGTTACGACGGGCTCACATACAACGGCGGGATTTAAGGAAGATAAAAGGAATAAAGCTACGCCAGTGTCATATTTGATGTACGGTCCATTCGGCTCATTCGGTCCAACTTTTGACTCCTCACGAGCCACAATTACCAAAGAGGAGTCCGACCTGTTGTACAGTACATACGGAGACGACAGTGGTATACATTACGCCAAAAGCCTCCAGACATTTGTCAAGGACTCCCCTTTCGCACGTGACGCAGCTGATAGACTGCTGGATGTGCTGACTGAAGGAGCACATTCTACATACCTCAAGCAAATGGCTGAGCGAGAGAAAGCAGAAGAAAACATTGCAAGGGAAAAGGGACTCATAGGAAAAAAAGCAGAAGATGAGGTTCACAAAACTCAGaacaaAGAGGAGGATCTCCTCAGTAAAGATGCAGAGATTTCTCCTGAACGAGCTTGTGTCCCGTCGACATCTTCATCAGGGGATGTGACCAAGATTGATTTTCAGTCGCTGTTGACTCTGGGTGACGAGGGAATAGATGTCTCATTTTTGAAGCCTCCAGGCGAGATCTCGGCGGCTGATACTCTGAGttccTGGCTTGCCGAAGACATACACGATAAGCTACACGCAACCGGAAAACTGTTGGATGACCTTCAAGAGGCACAGAACGTCCGGCTTGGCCATCGACCAGATGGTCCTGCGGCTCCCACCCCTGAGGCCGCCGTTCGACCTTCGCCCCATGAAAAGAAAATCGcTGAACATTTGTCAGAGAATCTCAAAGATCTTACGTCAAAGGCTTTCCCTGGAGACGTTGCTTCACTGGGGAATATCCGTGCTGCTATGGGGGTAGGGCTTGGTCCCAGTTTGCTTTCTGAACTGGGACAGAAAGCGGAGTCAAACAAGGAAAAGCCTGGTTCTGCACAACACGACTCTCCTGTTGAGGAAGCCGTTGAAACCTGCGACCATACATCTCCTGCAGAAAAGCAGTCTTCCTGA

Transcript

ENSJQFT00000032092

GGCGGTGGCTTGACTTAGAAAGTTAACATTTTTGAGAATTGTTTTGGGAAGCTGTTGGGTTTTGTGACAGGAAAGTGATAAGCAGCCTTAAAACGAAGATGGGGAAGAAACATAAGAGCAAGAAACATCACAAGAAAGGAGGAGATAATACAGATGCAGAGAAAGCAGAAAGGTTGGAGAGGGCCGAGAAGACTGAAAAACCAATCAAACTTGTGCTTAAAGTTGGTGGCAGTCAAGAAAAAGTGGCGTCCAAAAACCCACAAAACACCCCAAACAGATCAGCATCAAGCTTGGAAAGGATAAAAAGTAAAGATCATtcatcaaaaaagaaaaaaaagaaaaggtcctcatccaaagaaagaaagaaacccaAATTAGAgGGTTGTCACTCGCCATCATCTGTTAGTAGCCATGAAAAATCGAAGAAGAAACGTGACAGGCATGAAATGGAGGCAGAAGGTGTTGGTGTTGTTGAACCAGAACGATCAATAAAGAAAATCTACATCAAACCTATTGAACCTCCAGCAAGAAACATCCCAGAAACAAGAAAATTTTCTGGGCATGTAAAGGATCCAGAAGTGTCTCCACTTCAGCTGTGTCTGGAGAATATCCATCAGATGTTACAGAGgAAGGATACACAAGGCTTCTTTGCATATCCAGTGAATGACACCATAGCTCCAGGGTATTCAAACATTATCAGCAACCCAATGGATTTCAGCTTGATGAAATACAAAATTGATTCAAATGAGTATCGCTCCATAGAGCAATTCAGGGATGATTTTTACCTGATGTGCAACAATGCCATGATATATAATGCCCCAGAGACAATTTACTACAGAGCAGCTCGGAAGTTGATGCAGACAGGCGCAAGGATGCTGTCACTGGACAAAGTGAAGAGCATGTATCGCAGTATCGGTTATCCCGTCCCAGAATACGGGGGCTACGGATCCGAAGGACGTGGCTCAGATGAACCAATTGATGTTGACACTATTGAGATTGAAGAGAACCAAGCTCCAATGTCAGCAAAAAAGACAAAACCAAGAGGCGAGTCGAAGCAGACATCGGCCAGTCGAAAAATTCTTGCTCAAGTTCAAGAAGCGTCAAGAAGAGTTGCTGCGGAGCTTGAGGCTAAATACCTGAACAGCAAGATTGGTTTTCTTCGTCGCAGTAAGGATGGGACAACAACTTTAGCTGTTGTGAATCCAGACAACTCGGAAgTCCCAGAATACCTTGCTGTCAGCCTTGGTGCCGCAGCTGGTAAAGTTACGACGGGCTCACATACAACGGCGGGATTTAAGGAAGATAAAAGGAATAAAGCTACGCCAGTGTCATATTTGATGTACGGTCCATTCGGCTCATTCGGTCCAACTTTTGACTCCTCACGAGCCACAATTACCAAAGAGGAGTCCGACCTGTTGTACAGTACATACGGAGACGACAGTGGTATACATTACGCCAAAAGCCTCCAGACATTTGTCAAGGACTCCCCTTTCGCACGTGACGCAGCTGATAGACTGCTGGATGTGCTGACTGAAGGAGCACATTCTACATACCTCAAGCAAATGGCTGAGCGAGAGAAAGCAGAAGAAAACATTGCAAGGGAAAAGGGACTCATAGGAAAAAAAGCAGAAGATGAGGTTCACAAAACTCAGaacaaAGAGGAGGATCTCCTCAGTAAAGATGCAGAGATTTCTCCTGAACGAGCTTGTGTCCCGTCGACATCTTCATCAGGGGATGTGACCAAGATTGATTTTCAGTCGCTGTTGACTCTGGGTGACGAGGGAATAGATGTCTCATTTTTGAAGCCTCCAGGCGAGATCTCGGCGGCTGATACTCTGAGttccTGGCTTGCCGAAGACATACACGATAAGCTACACGCAACCGGAAAACTGTTGGATGACCTTCAAGAGGCACAGAACGTCCGGCTTGGCCATCGACCAGATGGTCCTGCGGCTCCCACCCCTGAGGCCGCCGTTCGACCTTCGCCCCATGAAAAGAAAATCGcTGAACATTTGTCAGAGAATCTCAAAGATCTTACGTCAAAGGCTTTCCCTGGAGACGTTGCTTCACTGGGGAATATCCGTGCTGCTATGGGGGTAGGGCTTGGTCCCAGTTTGCTTTCTGAACTGGGACAGAAAGCGGAGTCAAACAAGGAAAAGCCTGGTTCTGCACAACACGACTCTCCTGTTGAGGAAGCCGTTGAAACCTGCGACCATACATCTCCTGCAGAAAAGCAGTCTTCCTGACAAAGTTCACATCACGTTAAGTTAACAAAGAGTTTCAAAGAGCCATATTTATTGAGAGAAATCTTAGTCAATTTTTAaaccataacaataaaaatatgcTCAATGTGAGGTCTGATCTCGACGCAGTTGTAACGTGTgggtactaaagtaaattatcaatcacaagatcACTAAActattcaaaggccgacgtttcgagctttaccacttcgtcagagtgaataaactGTATTTTCTTGGGTATCCTGTCTAGATGGCCCGATCTCCCGGCGTTAGAGTAGAattgttgttatttattttttgttttcttgttgccgttgctgttgttgtttttgactCAGAGTCACTACTCTCAGCCTGACAGACTTCCGAGGTTCAAACCATTTTCTCAGTTTTGATTTATTCAGATACGATTAGCACCGCCAACTTAAACTTCGAACgaaactgagtgctgcgttggtgggaaagcgaaatactaatatagataatcaaccacaaggtcgataaggtaaattaccgaccgtaaaagattcgacgtttcgaccgacgtttcgagcgttatccctttttcagagtgaatcagagaatagtagtggaagaggctatttatatagggaaggaggagcaacgtgattagtagaaacaaacaatagaataatatggctaaattggaggaatgaaaaacgctctcttattccactgggactaagggtgttttgcggctttcagtattacctagatggagagaaaggccacaaaccgccatgtgtttttgagaatggttagggaagtTCTGTCACAAGATTGTCTCGCTTTTAGATAAGAATCCTATAAGTCCATATTCAACCGTTTTGTCCATATCCAAATTATTACTATGTgagtgaattaaaaaaaaaaacaaacgagcCACAAAAGGTATTTATACAGTACTt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12024 all species →	DUF3512	Domain of unknown function (DUF3512)	Family	Interproscan
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR051831 all species →	Family	Bromodomain-containing	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR021900 all species →	Family	Protein of unknown function DUF3512	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22881 all species →	BROMODOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0070577 all species →	Molecular Function	lysine-acetylated histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11723	BRD7; bromodomain-containing protein 7	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.