Gene detail

Detailed information of ENSJQFP00000031508.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000032780

ATGTCTTCACGGGTTTTAAGAAAGCTTCAAGGTGataaagaatttgaaatttcactGAATGAGGACGAAGATGATTTCACTTTTGTAGCAGTTGAGTCTAAGAAGAAAAATAAGAGCGTGGCAAATCCGTTTGCTTTGTTAAATGAAGATGGAGAGAAATCAGATGGAGATTCAGGTGTCAACGAGGAAGAAGAGACTCCAAACCAAACCAAAAGTGAAGGGCAACAACATGATACCAAGCCTTCACCGAAACAatcctcaaagaagaagaaaaagagaaggaaaaagaaaggaaaggaggAAGTTCGGGATGAAAAATGTGGCACAGAAGAGCAGAACATTGATGGAGTTCTTAAGGAAGTGAACGGCATGTTTGATAAGCAAGAACTCACACTAACCGGCACAGTGGTAACAGCAGGGCAAAGCACTTCAAATGTTTTGGACACAAAAGCTTTACTTGGAGTTGAACATAGAAACCTGAATGCTGAGAATGAAATGATTAAAAGATTTGGATCTCATATTGTCAGGGCTGAAACTCGGCAAAGGAAAACACGCAGAAGGATGTATCACCATGCTTCTTGGATGGTGAATCccaaacaaacatggccacATATGGGGAAGACAGGCATCAGTATGAAGCTTTTGGAGACAAAAAATGGATACAATTACTTTGCCTTTGAACATTCTGCATCTTATCAGAATGTGCAATTCCTGTTTCTTGATGCTGTGGAATCACTGAACCCTAATAACATCTCGGCCATTTTAAACACACATCCCTACCACATCGATTCCTTGCTCCAACTTAGTGAAATTTGTAAAATGGGGGAAGACTATCAGATGGCTGCAGAATTAATTGAACGCGCGCTCTATTGTTTTGAATGCAGCTTTCATACGTTATTCAGCTTAACACAGGGAAAGTGCCGACTTGATTATAGGAGAGCGGAAAATCGGTCATTCTTCATTGCGTTGTTTCGTCAGCTGATCTTTGTAGGACAGAAAGGATGTTATAGAACGGCTTTAGAGTTTTGTAAACTCCTGCTTAGCTTGGACCCTGATGATGATCCCCTTTGTGTTATTCTGATGATTGATTTCTACGCCCTGCGAACAGAGCAGTTCAGTTTCCTCGTACGATTATTTGAAGAGTGGGAGTCTCATAGGAACTTGTCTCAGCTGCCAAATTTTGCATTCTCCACCTCTCTTGCTTACTTTCACATCGATAAACAACATGGCAACACAAGAAGAGCAGATGAAATGCTCCAGAAAGCATTGATCATGTTTCCCAAGGTTTTGACACCACTCATGGAAAAATGCAACGTCCTCCTGGACTCTTCCCTGATGAACCATCCATTCTTTTCCGTGGTTAACAGCGAGCCTATAGCGTTGAAACAGTTGGAGTCGCTGTACATAGGGAGAACTTTTCATGCGTGGAAGGAACCAGAGGTGATTGATTGGCTTGTTGCAAATGCCAAACAAGTCTTAAAAAGGGTGGCAGTACAGGATCCTCTGGTAGAGGAATGTGAACAAAAGCGGAAAGTGCGCTACAGAGGAACGCCACGAAATATCTACAGACACATAATTATGTCGGATGTCAAAGATGCCACTGCTTCTCTACCCTTGGACTTGGTCAATGTGCCGCTTGTATCGTATGATCCTCTGCCTCCACAAGATTCAACAGCCGAATACACTCGCCCGCAAAGAAGTGCCGCTCATGATGAACACGGCCCATTTTCTACGTTTTTCCGGTCCCTTCTCCCATCCTTCAACGCGCAGAATCCTGCACAGCAAGTCGAGCTCAGGTTCGAGCAGCCTGCAGATGTTGCAGCAGAGGGAGGACCCAGACCTCTACGGGACACAGAACTTGCTCGGGGCGTGGAAAACCTGATGGTTGCCATGAGAGAGCTGCTGAACACGCTTAGCTTCAGAGGGCAACCGGAAGAGCCTGGTGCCAACGACGCGGCACAAAATAACGGTGAAGATGAATGGGAAGACGACTGA

Transcript

ENSJQFT00000032780

CAACGGCGGTGTGGTTACTAAGGAGTTCCGATTcagtaaaaaaaagtaaaagtaaactTCGTGGCATTGAAAATGTCTTCACGGGTTTTAAGAAAGCTTCAAGGTGataaagaatttgaaatttcactGAATGAGGACGAAGATGATTTCACTTTTGTAGCAGTTGAGTCTAAGAAGAAAAATAAGAGCGTGGCAAATCCGTTTGCTTTGTTAAATGAAGATGGAGAGAAATCAGATGGAGATTCAGGTGTCAACGAGGAAGAAGAGACTCCAAACCAAACCAAAAGTGAAGGGCAACAACATGATACCAAGCCTTCACCGAAACAatcctcaaagaagaagaaaaagagaaggaaaaagaaaggaaaggaggAAGTTCGGGATGAAAAATGTGGCACAGAAGAGCAGAACATTGATGGAGTTCTTAAGGAAGTGAACGGCATGTTTGATAAGCAAGAACTCACACTAACCGGCACAGTGGTAACAGCAGGGCAAAGCACTTCAAATGTTTTGGACACAAAAGCTTTACTTGGAGTTGAACATAGAAACCTGAATGCTGAGAATGAAATGATTAAAAGATTTGGATCTCATATTGTCAGGGCTGAAACTCGGCAAAGGAAAACACGCAGAAGGATGTATCACCATGCTTCTTGGATGGTGAATCccaaacaaacatggccacATATGGGGAAGACAGGCATCAGTATGAAGCTTTTGGAGACAAAAAATGGATACAATTACTTTGCCTTTGAACATTCTGCATCTTATCAGAATGTGCAATTCCTGTTTCTTGATGCTGTGGAATCACTGAACCCTAATAACATCTCGGCCATTTTAAACACACATCCCTACCACATCGATTCCTTGCTCCAACTTAGTGAAATTTGTAAAATGGGGGAAGACTATCAGATGGCTGCAGAATTAATTGAACGCGCGCTCTATTGTTTTGAATGCAGCTTTCATACGTTATTCAGCTTAACACAGGGAAAGTGCCGACTTGATTATAGGAGAGCGGAAAATCGGTCATTCTTCATTGCGTTGTTTCGTCAGCTGATCTTTGTAGGACAGAAAGGATGTTATAGAACGGCTTTAGAGTTTTGTAAACTCCTGCTTAGCTTGGACCCTGATGATGATCCCCTTTGTGTTATTCTGATGATTGATTTCTACGCCCTGCGAACAGAGCAGTTCAGTTTCCTCGTACGATTATTTGAAGAGTGGGAGTCTCATAGGAACTTGTCTCAGCTGCCAAATTTTGCATTCTCCACCTCTCTTGCTTACTTTCACATCGATAAACAACATGGCAACACAAGAAGAGCAGATGAAATGCTCCAGAAAGCATTGATCATGTTTCCCAAGGTTTTGACACCACTCATGGAAAAATGCAACGTCCTCCTGGACTCTTCCCTGATGAACCATCCATTCTTTTCCGTGGTTAACAGCGAGCCTATAGCGTTGAAACAGTTGGAGTCGCTGTACATAGGGAGAACTTTTCATGCGTGGAAGGAACCAGAGGTGATTGATTGGCTTGTTGCAAATGCCAAACAAGTCTTAAAAAGGGTGGCAGTACAGGATCCTCTGGTAGAGGAATGTGAACAAAAGCGGAAAGTGCGCTACAGAGGAACGCCACGAAATATCTACAGACACATAATTATGTCGGATGTCAAAGATGCCACTGCTTCTCTACCCTTGGACTTGGTCAATGTGCCGCTTGTATCGTATGATCCTCTGCCTCCACAAGATTCAACAGCCGAATACACTCGCCCGCAAAGAAGTGCCGCTCATGATGAACACGGCCCATTTTCTACGTTTTTCCGGTCCCTTCTCCCATCCTTCAACGCGCAGAATCCTGCACAGCAAGTCGAGCTCAGGTTCGAGCAGCCTGCAGATGTTGCAGCAGAGGGAGGACCCAGACCTCTACGGGACACAGAACTTGCTCGGGGCGTGGAAAACCTGATGGTTGCCATGAGAGAGCTGCTGAACACGCTTAGCTTCAGAGGGCAACCGGAAGAGCCTGGTGCCAACGACGCGGCACAAAATAACGGTGAAGATGAATGGGAAGACGACTGATACTAGAACAACATGTCAGCGGATGTCTTTAATTGTTTCTTCTTCAGAAACATGTAGTGTGGTACTTGTCGGTCGAGGAATGTGTTACAGAGCATGTGTACCGCGCTGCGAAGTTCTAAAAATTTCTGGTGTTGAATGTGTCGACCCCGTGCACTCTAGAGAATACAAGCGTGGAGAACTATGGAAATTATGGGAAAACGAGCAGCCAGATATGTGCCCCATATGTTACTGCAGGCCAGAAGCGTAGCAAATTATTTTTGGACTGACCACAGGGGAGATCAATTAAATGCCGAAAAAAGACATCCTCAGTCGGACAAAACGTTCATTTGATCACATAGAAGATAGCTTCTAAATGGatttataaatatatacatatacatacatatgtagGTGCGGTCTACcgtggcataaagtgctcaatgctgtggtagcagagcaaagtatacataagttgaaaaatcaaagacgacgcatcgattctctgtaactctgagtttcgcgctgaagcgctcgtcagacgggGGGATTTAAAATCCTTTAATTAaacttttttctccaacaatatatacatacatatatatgtgtatgtgtgtatctACGATCTATTGATATCTAAAAGGAGGCATTAATTTCTCTGCTGAAACTGCTCAATGCGGTTTGCAGAGCGTTGTAATAGAATAACGGAAAAAATCAAACATTGGTTGTCCGTAACTACGAGTTTCACAGATATACATATAtcatttatatgtatatatgtatgtatgtttgtCCTGTCGCTGAATGATGTCAAAGGGAAAGACTACATCGAAAACGTTCTGAATGGGTCTAGCGAATAGAGAAGTGGGAAATGTTTCAACCCAATACCAAGGTGCAGGCTCACGGTGGGAGAAATGTGTGTTGTTTGGAGCGCGTTCTCCAACCTCCCGTACCAACATTGACGTGAGCTGCTTGGGTCGCCTGTGGCTATAGCATCTAACCTGGATCGAGTTACTAATTCTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04910 all species →	Tcf25	Transcriptional repressor TCF25	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006994 all species →	Family	TCF25/Rqc1	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22684 all species →	NULP1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:1990112 all species →	Cellular Component	RQC complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24970	TCF25, RQC1; transcription factor 25	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.