Gene detail

Detailed information of ENSJQFP00000031671.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000032949

ATGCACGCGAATGTAGACTCATTGTCCCTGGCCCTCGGACAGATCAGTTTTGCGGTCagtgatttgacgaagaagaaTTACAAAGCTACTCTAAAAGAACTACACGAGCTGATAGAAAAGCATGGGTATGAAGCAGAGCGCCATTTGTTCCGATGTCTGTTCTCTTTTATTGATTTCTCAGCTGATGGCAAAAATAATGGCAAGGATTTTTTACAGATTCAGTTTCTGATTCAAGAATGCCATGTTCTCGTTTCCAAACCGAACTTTGCTTCTATCTTGTGCTATGCTATTGAAACACCTGAACATAAGCAGCGAACACTGCGGCCATCATCTCAGCTTCTGCCCAATGTCAGCAGAGTTTTGAAGCTCAACAAAGGTCAAGAGGTAATCTTTGGATTAGGTCTTCTCTGCTCCTCGAGTGAAGAATTGAAAATTTATGcCGGTCAGTTCGTTAAACAGAGACTACCAGATCTATTGAGATCATACATTGATGCTgatTTGGCAGGTTCGCAGGAAGGTGGCTTGACGGATGTTGCTATAGAAGTGTTACACCGTCTTCTCTCTCATGTGATCCATGGACCAAGAGAACAGGTTGGCGTTGGTGAAGATCAAGTTGTAGCATTCCTGGATACACTAAAGAAAGATTTTCCCAAAGAACGTGTTCCTGTGATTCTTGCCCCACTGCTGTATCCTGAGGCAAAGGACATATCAACAGACATtcTTATGCCAGACCCTGATCCAGATGGACCAACCAAAATAGTGATGGAGGAAGACCTGGCTGACTTGATGTTTGAGATAGGATATGTCTGCTGTACTAGTGTTGAAGATTGCCGTGAGACACTTCTTCAGTTTGGTGTGCAGGACATCACAGCAGCATCAGTGGCCAGAGTTGTTGGGATGATGGTGAAAACCATATTTGGCCTTGGAGAACATGTTAATATTCAGAACTATGGAAACAGCTCAGTATCTTTGGATAAGCTGGGGTTGAATGACCTGGTGCCGGGGTCTTCATCTTGGAATGTAGAGGTTTTTGTCCAAGCTCTGAAAGAGTTGGTTCCTGTACTAAACTGGCGCCAAGTAATTCAAGAGTTAGACTACCCTGGGTTTATTGTGCTAAGCCGTGAAGGTCTACAGCTGCTCTTCAAAGCCTGCCACATGGGGCTTTTGGAGATATTTCCTGTTGATGTACTGTACAGGACATGGACCAACACTGAAGGACAGTTGTCCTGGATACAGCAGATTCTGGCAAATCCCGACATATTTTGTTTTGCTGATTATCCTTGCCACACAGTCGTCATTGACCTGCTAAAGGCTCCACCAGAAGACGATAATAGAGAAATTGCTATGTGGAAGTCTCTGAACCTTTCAGAAACACTGTTGAGACTTTCTGAGGCTGGACACTATGAAACGGTGCAGTCACTCTTCAGTTATCCTTTGAAGCACTGCCCTGATGTGCTGCTACTGGCTCTGCTTCAAATCAATCCTCTTTGGCATACACTGCGGAATGAACTTGTTTCTCAACTTATACCTGTGTTCCTGGCCAACCATTCAAACTCTGGAAGTGTGTTGCATTATGTATGGCATGGTCAGGGCCAGTCTACATCAATTCGTCAACTTGTAATGCAGGCCATGGCTGAGTGGTACACCAAAGGAGACATGGATCAAGGAAGACTGTCAAGAATACTAGATGTAGCCCAGGACCTCAAGGCACTGTCAATGCTGTTGAACGGCTCACCATTTATGTTTGTTATCGATCTGGCTGCCCTGGCATCACGGCGCGAATATCTCAAGCTGGACAAGTGGCTCAAGGATAAACTTAAGGAACATCAGGAGGAATTTGCTCAAGCATTGGTTTCATTTCTGAGACGCCGATGCCCTTATCTGGTTGGGATCAGTTTGGATAAGGAACTTCCAAAAAGTGTCCAGTTGCCACTTGAGACAGTAGTCACCATGCTATCATGTCTTCAAGCATTCTTGGGTCAAGCATCACCCGAGTTAGCTGATGTCATCAGTCAGATGCTGACCAATCATGGACCTTTAGTAAAGACTCGCCCCAGTGCAGCAGTGGTGGGGGTACCTCTCAAGAGACAAGGCAGTCTAGATGCCGGTTTGCCGACAAGTTTGGCCAGTCAGcttgatCCACTTGGAAACCTGAGCATCACGTCATCAATACCTCCCACCCCTCCCACACCTCCCTCACAACTTCCATCTTTTCCTCCCCACCCCCTGTCAGGCACCTCATTAGGACCTTCAGGCAACTTGGTAGCTCTGGGCAGCATCGGGTCAGGTTTGCCACAGAGTTTACCGAAGCCAGCGTCTCAGCTGGGGCAGCTTCCTCTTAGCACACCAGTAACAAGCAGCGTTGGCCTTCAGTCGCCCAGTTTCACCTCGTCGCAGAACCCGTTGTTGCAGCAGCTGCACCAGGCTGGTGGTCTGAGCCAGTCGCTTGGTGGGTCGGCATTGGACAACGCCAGACTACTGGCTGGGCTTGGGATTCAGAAGCCGATTGGTGGTTCGCTtttgcaacagcaacagcagcagcaacaaacaGCCTTGATGGCTCAGTCACGAAATCAAGTGGACAAACTGCGCCAAGCTTCCACAGCCGACGTTTCTCAAGTGTGGCCAGGTATGGATCAGTCATTCACAAAAGAGGTTGAAGATGAAGCGAATTCCTACTTCCAAAGGATTTACAACCACCCTCCGAACCCTACCATCAGCATTGATGAAGTTCTAGAGATGCTGAAGAAGTTCAAAGACTCACCTGTGAAGAAAGAGAGGGACATTTTCCTGTGCATGCTACGAAATTTGTTTGAGGAGTACAGATTTTTCCCCCAGTATCCTGACAAAGAGCTCCACACAACAGCTTGTTTGTTTGGTGGAATCATTGAGCAGGGACTGGTAACCTACATGGCCCTAGGAATTGCGTTGCGGTATGTCCTGGAGGCGTTAAGAAAACCTTTTGGTTCAAAGATGTACATGTTTGGAATAGCTGCTTTAGATAGATTCAAAACAAGACTGAAAGATTACCCTCATTACTGTCAACACCTGGCATCTATCCCTCATTTTATGGAGTTTCCTTCTTCCTTGATGGAGTACATCGAATATGGGCAGCAATCGAGGGAACCCCCCCTAAGCAGCAGGAATATTCAGGACCCATTGACGTCAAGGTTACTGAACCGAGCCACACCCACCCTGACAAGCGTGTCGGGTACACCAACATTCACTAGCACGGCTGTCAGTAGACCAGTTCCTCTTGGCTCATCTATGCCTCTGGGCCCTTCAGTGGCCATAGGATCAACTATACCAGTGGCTCCCACCGCTTCCTCTACCGGAAGTTCTTTGACGTCTACCAGAACCACTTCTACATCAGATGTTGCAGCCACTTCAGTGCGTGGAAAGGAGCCATCCATTGCTACTGCCAACAACATTGACACACTACTTGGTGCCACAGAGACCAGTGATGTGGTGCAACCACCAGAAGCTGTGCAAGACAAAGTCCACTTCATCTTTAACAACATAACGACACAAACTCTGCAACAGAAGGCTGATGAGCTAAAGCAGCTCGTTCAAACGGAGCATGTCTTGTGGGTGTCTCAGTACCTTGTTATGAAGAGAGCCAGCATTGAACCCAACTTCCATCAGGTTTACTTGGAGTTCATGGACGCGCTGGACATGTCCAGTGTCACCAgagaagttttgaaagaaacgtaCCGAAACATCAAGGTGTTGCTTCAGTCGGACAAAGTGCCTGCCAACTTCTCTGATCGGTCGCTGTTGAAGAATCTTGGACACTGGCTTGGACTTCAAACCCTGGCTAGAAACAAGCCCATTCTTATGAAGGACCTTGACTTGAAATCTTTAATAATGGAGGCTTACTTCAAAGGACAACAGCCAGCCCTAAAGAAGGGGTCATGTCAGTCTAATATCCTTGTAAAAACTTCAGCTGCAATAACTCTGAAGCTGCCTTCTACTCCTCCCCCGTTACCATGCTGTTTTCGTGACTATTTTCTCTTCAACGAGGGTGTTTTCAGGGAAAAGAGAGACGAAAGGAGATGCTCTACGTTGTTCCGTTTGTTGCCAAAGTAA

Transcript

ENSJQFT00000032949

GGATCTTATCCAACCGGTGGCCATACCTTTTTCTGTCCAAACGGCGAAAATAGTTCACTTTATGAGGTGACATTGACGTAACTTTCGTCACGATGTAGAATGCGGTATCTTCCAACTCTCAAGAAATGATATTGTCTTAGGTTTTGATGCATATTTTGCGCGAACTACGTTAAAAgctgtagggggtatagtttcgaaagaaactgtgtgctgtacgTTAAAAGCTGTGTTTTGGAAGTATCGATCGCTCTAATCATGCACGCGAATGTAGACTCATTGTCCCTGGCCCTCGGACAGATCAGTTTTGCGGTCagtgatttgacgaagaagaaTTACAAAGCTACTCTAAAAGAACTACACGAGCTGATAGAAAAGCATGGGTATGAAGCAGAGCGCCATTTGTTCCGATGTCTGTTCTCTTTTATTGATTTCTCAGCTGATGGCAAAAATAATGGCAAGGATTTTTTACAGATTCAGTTTCTGATTCAAGAATGCCATGTTCTCGTTTCCAAACCGAACTTTGCTTCTATCTTGTGCTATGCTATTGAAACACCTGAACATAAGCAGCGAACACTGCGGCCATCATCTCAGCTTCTGCCCAATGTCAGCAGAGTTTTGAAGCTCAACAAAGGTCAAGAGGTAATCTTTGGATTAGGTCTTCTCTGCTCCTCGAGTGAAGAATTGAAAATTTATGcCGGTCAGTTCGTTAAACAGAGACTACCAGATCTATTGAGATCATACATTGATGCTgatTTGGCAGGTTCGCAGGAAGGTGGCTTGACGGATGTTGCTATAGAAGTGTTACACCGTCTTCTCTCTCATGTGATCCATGGACCAAGAGAACAGGTTGGCGTTGGTGAAGATCAAGTTGTAGCATTCCTGGATACACTAAAGAAAGATTTTCCCAAAGAACGTGTTCCTGTGATTCTTGCCCCACTGCTGTATCCTGAGGCAAAGGACATATCAACAGACATtcTTATGCCAGACCCTGATCCAGATGGACCAACCAAAATAGTGATGGAGGAAGACCTGGCTGACTTGATGTTTGAGATAGGATATGTCTGCTGTACTAGTGTTGAAGATTGCCGTGAGACACTTCTTCAGTTTGGTGTGCAGGACATCACAGCAGCATCAGTGGCCAGAGTTGTTGGGATGATGGTGAAAACCATATTTGGCCTTGGAGAACATGTTAATATTCAGAACTATGGAAACAGCTCAGTATCTTTGGATAAGCTGGGGTTGAATGACCTGGTGCCGGGGTCTTCATCTTGGAATGTAGAGGTTTTTGTCCAAGCTCTGAAAGAGTTGGTTCCTGTACTAAACTGGCGCCAAGTAATTCAAGAGTTAGACTACCCTGGGTTTATTGTGCTAAGCCGTGAAGGTCTACAGCTGCTCTTCAAAGCCTGCCACATGGGGCTTTTGGAGATATTTCCTGTTGATGTACTGTACAGGACATGGACCAACACTGAAGGACAGTTGTCCTGGATACAGCAGATTCTGGCAAATCCCGACATATTTTGTTTTGCTGATTATCCTTGCCACACAGTCGTCATTGACCTGCTAAAGGCTCCACCAGAAGACGATAATAGAGAAATTGCTATGTGGAAGTCTCTGAACCTTTCAGAAACACTGTTGAGACTTTCTGAGGCTGGACACTATGAAACGGTGCAGTCACTCTTCAGTTATCCTTTGAAGCACTGCCCTGATGTGCTGCTACTGGCTCTGCTTCAAATCAATCCTCTTTGGCATACACTGCGGAATGAACTTGTTTCTCAACTTATACCTGTGTTCCTGGCCAACCATTCAAACTCTGGAAGTGTGTTGCATTATGTATGGCATGGTCAGGGCCAGTCTACATCAATTCGTCAACTTGTAATGCAGGCCATGGCTGAGTGGTACACCAAAGGAGACATGGATCAAGGAAGACTGTCAAGAATACTAGATGTAGCCCAGGACCTCAAGGCACTGTCAATGCTGTTGAACGGCTCACCATTTATGTTTGTTATCGATCTGGCTGCCCTGGCATCACGGCGCGAATATCTCAAGCTGGACAAGTGGCTCAAGGATAAACTTAAGGAACATCAGGAGGAATTTGCTCAAGCATTGGTTTCATTTCTGAGACGCCGATGCCCTTATCTGGTTGGGATCAGTTTGGATAAGGAACTTCCAAAAAGTGTCCAGTTGCCACTTGAGACAGTAGTCACCATGCTATCATGTCTTCAAGCATTCTTGGGTCAAGCATCACCCGAGTTAGCTGATGTCATCAGTCAGATGCTGACCAATCATGGACCTTTAGTAAAGACTCGCCCCAGTGCAGCAGTGGTGGGGGTACCTCTCAAGAGACAAGGCAGTCTAGATGCCGGTTTGCCGACAAGTTTGGCCAGTCAGcttgatCCACTTGGAAACCTGAGCATCACGTCATCAATACCTCCCACCCCTCCCACACCTCCCTCACAACTTCCATCTTTTCCTCCCCACCCCCTGTCAGGCACCTCATTAGGACCTTCAGGCAACTTGGTAGCTCTGGGCAGCATCGGGTCAGGTTTGCCACAGAGTTTACCGAAGCCAGCGTCTCAGCTGGGGCAGCTTCCTCTTAGCACACCAGTAACAAGCAGCGTTGGCCTTCAGTCGCCCAGTTTCACCTCGTCGCAGAACCCGTTGTTGCAGCAGCTGCACCAGGCTGGTGGTCTGAGCCAGTCGCTTGGTGGGTCGGCATTGGACAACGCCAGACTACTGGCTGGGCTTGGGATTCAGAAGCCGATTGGTGGTTCGCTtttgcaacagcaacagcagcagcaacaaacaGCCTTGATGGCTCAGTCACGAAATCAAGTGGACAAACTGCGCCAAGCTTCCACAGCCGACGTTTCTCAAGTGTGGCCAGGTATGGATCAGTCATTCACAAAAGAGGTTGAAGATGAAGCGAATTCCTACTTCCAAAGGATTTACAACCACCCTCCGAACCCTACCATCAGCATTGATGAAGTTCTAGAGATGCTGAAGAAGTTCAAAGACTCACCTGTGAAGAAAGAGAGGGACATTTTCCTGTGCATGCTACGAAATTTGTTTGAGGAGTACAGATTTTTCCCCCAGTATCCTGACAAAGAGCTCCACACAACAGCTTGTTTGTTTGGTGGAATCATTGAGCAGGGACTGGTAACCTACATGGCCCTAGGAATTGCGTTGCGGTATGTCCTGGAGGCGTTAAGAAAACCTTTTGGTTCAAAGATGTACATGTTTGGAATAGCTGCTTTAGATAGATTCAAAACAAGACTGAAAGATTACCCTCATTACTGTCAACACCTGGCATCTATCCCTCATTTTATGGAGTTTCCTTCTTCCTTGATGGAGTACATCGAATATGGGCAGCAATCGAGGGAACCCCCCCTAAGCAGCAGGAATATTCAGGACCCATTGACGTCAAGGTTACTGAACCGAGCCACACCCACCCTGACAAGCGTGTCGGGTACACCAACATTCACTAGCACGGCTGTCAGTAGACCAGTTCCTCTTGGCTCATCTATGCCTCTGGGCCCTTCAGTGGCCATAGGATCAACTATACCAGTGGCTCCCACCGCTTCCTCTACCGGAAGTTCTTTGACGTCTACCAGAACCACTTCTACATCAGATGTTGCAGCCACTTCAGTGCGTGGAAAGGAGCCATCCATTGCTACTGCCAACAACATTGACACACTACTTGGTGCCACAGAGACCAGTGATGTGGTGCAACCACCAGAAGCTGTGCAAGACAAAGTCCACTTCATCTTTAACAACATAACGACACAAACTCTGCAACAGAAGGCTGATGAGCTAAAGCAGCTCGTTCAAACGGAGCATGTCTTGTGGGTGTCTCAGTACCTTGTTATGAAGAGAGCCAGCATTGAACCCAACTTCCATCAGGTTTACTTGGAGTTCATGGACGCGCTGGACATGTCCAGTGTCACCAgagaagttttgaaagaaacgtaCCGAAACATCAAGGTGTTGCTTCAGTCGGACAAAGTGCCTGCCAACTTCTCTGATCGGTCGCTGTTGAAGAATCTTGGACACTGGCTTGGACTTCAAACCCTGGCTAGAAACAAGCCCATTCTTATGAAGGACCTTGACTTGAAATCTTTAATAATGGAGGCTTACTTCAAAGGACAACAGCCAGCCCTAAAGAAGGGGTCATGTCAGTCTAATATCCTTGTAAAAACTTCAGCTGCAATAACTCTGAAGCTGCCTTCTACTCCTCCCCCGTTACCATGCTGTTTTCGTGACTATTTTCTCTTCAACGAGGGTGTTTTCAGGGAAAAGAGAGACGAAAGGAGATGCTCTACGTTGTTCCGTTTGTTGCCAAAGTAATCGAATCATCGTCCAAGAGTAAAGTGTTCAAGCCTCCCAATCCCTGGGTTATGGCCATCATGGCGGTGCTGGTTGAGTTGCACCAGGTGCCAGATTTGAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16418 all species →	CNOT1_HEAT	CCR4-NOT transcription complex subunit 1 HEAT repeat	Domain	Interproscan
PF16417 all species →	CNOT1_TTP_bind	CCR4-NOT transcription complex subunit 1 TTP binding domain	Repeat	Interproscan
PF16415 all species →	CNOT1_CAF1_bind	CCR4-NOT transcription complex subunit 1 CAF1-binding domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032194 all species →	Domain	CCR4-NOT transcription complex subunit 1, HEAT repeat	Interproscan
IPR032193 all species →	Domain	CCR4-NOT transcription complex subunit 1, TTP binding domain	Interproscan
IPR038535 all species →	Homologous_superfamily	CCR4-NOT subunit 1, TTP binding domain superfamily	Interproscan
IPR040398 all species →	Family	CCR4-NOT transcription complex subunit 1	Interproscan
IPR032191 all species →	Domain	CCR4-NOT transcription complex subunit 1, CAF1-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13162 all species →	CCR4-NOT TRANSCRIPTION COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000288 all species →	Biological Process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Interproscan
GO:0000932 all species →	Cellular Component	P-body	Interproscan
GO:0017148 all species →	Biological Process	negative regulation of translation	Interproscan
GO:0030015 all species →	Cellular Component	CCR4-NOT core complex	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000031671.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.