Gene detail

Detailed information of ENSJQFP00000031679.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000032958

ATGTCCACAGAGGCCGCCAAATCAGGAGAAGAAGGTATGAGCAAATTTGCTAGAGGCTCTAGGTTTACAATAGCTGAGCACCAGGAGAGATACAAAGAGGAGTGCCAGAGGATATTCGACCTACAAAACAGAGTCTTGTCGTCAAAGGAAGTTCTGTCAACAGACGAGGAAACTAGTAGTGATGAGGGAAGTGATATTGACGAACTGGGCAAAAACCTGGAGAGTATGTTGGCTAACAAGAAATCCAGCACTCAGCTAACGCACGAAGAAGAAGAGGCCGAGAGAAGAGAACTTCAGAAGCTTCTGAGTGAAGAAAAACCCAACAAGGAGTTAAATGGAAAGAACTTGGGTGACAAAGGAGGGAAAGAAGCTTTTAGAAAAGAAAGTAAATTCGAAGACGATGACACGGCTTCAGTCACAAGCTACGAGTCCTCTATGGTTGGTCGGCGTCTTCGCATCCAGCGAACGTTCAAAAGTAGTGATGGAAAACAATTTGTTCGAACAGAATACGTCAAAAACCAGGCCGTCATTGATGCCTACCTCAGGTTTAATAAGGACAAGAATATCAGGGCCCAGTTTGCCAGTGTTGATGAAATCCACAAAGAAGAAATTCGAAGAGAGAAGAGGAGGATTCAGGAACAACTAcgaagaataaaaagaaaccaagagaaagaaaagctgCAACcagtaaaaaagaaaaaggaaaagccaCCCAATAATTTGAAGTGTGGTGCGTGTGGAGCAATTGGTCACATGAGAACCAATAAAAACTGCCCCAGCTACCAAGAATCCAACCCGGGTTCCGTGACGGTGGCCATGACAGATGAACAAGTGGCCGAAGAGGAACTCAACATGCCTCAAGATGATCTTGTAAAAGTGGAAGGGACTAAGATCACTCTGGGAAAAGCTTTTCTTGATCAAACTATTGAATTAAAGAGGAAAGCCCTGGTCTTACGCTTTCCGAAAGAGTCTGttCGGAAGAAAAGACGTTCTGGAGTGATGCACTGTGACTATTTAAAGAAACCACGGAAGTCAATCAATCGTCGTAGAGCCAATCCAGAGGTGGCGTTACAAGCCGTGTTTGAAGGaattctcaacaaaatgaaagatGTTGAAGATACGTGGCCTTTTCATCAGCCTGTTTCAGCGAAAACCGTTCCGGATTACTACAGAATTGTTAAGATTCCTATGGACTTACAGACCATGCGCGAGAACCTGAGGAAATGTAAATATTCGTCGCGAGAGGAGTTCCTTGAACACGTGACTTTGATTGTGTCAAACAGTGTTCTCTACAATGGTGCAAAGCACCCTTACACAGTTACAGGTCAACACATGTTGGAAGTGTGCAACAAGTTGCTAAACGAGAAAGAAGATGAAATTATTCAACTGGAGAAAGAGATTAACCCGATGCTCAGCGACGACCCACAGatttcgttttcgtttttccTGGAGAATCTTGTAGCACAGATGAAAGCCCTGCCTGAGAGTTGGCCTTTCCAAAAGCCTGTATCCTCGAAGCAAGTTCCGGATTATTATGACGTGGTGAAGACACCCATCGACCTACTGACCATTAAACAGCAAGTGCAAGGGCACGCTTATCAAAACAGAGACGAATTCATGGCACACGTACGCATGCTCCACAGGAACAGTGTTCTCTATAACGGTGAATTCCACGATTTCTCCAAGATGGCTTTTAAATTAGTCACGTTTTGTGAGGATGCCCTGAAGGACAATGACGAACAACTGTCCAAGCTGGAGAATGAAATTCTCCTTACCCCAGCAGACGACTCATCCTCATACGCAACCAGTCAACCGCCTTCAGTAGCCGGTCCAGAATGGTCAGCGGAAAACAGCATGGAAGACTTTCCTGAAGGTTTTATCAAGGAAGAAGACCTGGACACTACTGGAGACGACATGGGTGAGATAAAAGCGAATGTCAGCACACCTATCTCGGCTGACCAGTCTTCTCGATTGGATGCGGATTTCGACGAGGAGGACGAAGTTGATGTAGAAGGGTACGACGACGAAGGAAAAACTTCACCAAATTACATCAGAGATGGCAGTGGCGAGCCACCGCCACAAGCACAGAGTGAACAAGATTCCCAAGATGTGTCCGCTTTTGAGAGCATTTTACTCCAAGATCTTGAACACAGCGATAGTGAGAGTGACGAAGAGGACGACTTTCCTTTTGGTGATGGTgacgaagaggaagaagaggacATCGACGAAGTAGAATCATTGGGCTTTTTTCCACGTTTAGCGGACAATGACGAGTCGATGGACACGGGAAATTTATCAGGGGATGAGATTTAA

Transcript

ENSJQFT00000032958

ATTCGTAAGCTGTCGCGATGGGAAGTGATCGATGTGGTTCGAACCATGTCCACAGAGGCCGCCAAATCAGGAGAAGAAGGTATGAGCAAATTTGCTAGAGGCTCTAGGTTTACAATAGCTGAGCACCAGGAGAGATACAAAGAGGAGTGCCAGAGGATATTCGACCTACAAAACAGAGTCTTGTCGTCAAAGGAAGTTCTGTCAACAGACGAGGAAACTAGTAGTGATGAGGGAAGTGATATTGACGAACTGGGCAAAAACCTGGAGAGTATGTTGGCTAACAAGAAATCCAGCACTCAGCTAACGCACGAAGAAGAAGAGGCCGAGAGAAGAGAACTTCAGAAGCTTCTGAGTGAAGAAAAACCCAACAAGGAGTTAAATGGAAAGAACTTGGGTGACAAAGGAGGGAAAGAAGCTTTTAGAAAAGAAAGTAAATTCGAAGACGATGACACGGCTTCAGTCACAAGCTACGAGTCCTCTATGGTTGGTCGGCGTCTTCGCATCCAGCGAACGTTCAAAAGTAGTGATGGAAAACAATTTGTTCGAACAGAATACGTCAAAAACCAGGCCGTCATTGATGCCTACCTCAGGTTTAATAAGGACAAGAATATCAGGGCCCAGTTTGCCAGTGTTGATGAAATCCACAAAGAAGAAATTCGAAGAGAGAAGAGGAGGATTCAGGAACAACTAcgaagaataaaaagaaaccaagagaaagaaaagctgCAACcagtaaaaaagaaaaaggaaaagccaCCCAATAATTTGAAGTGTGGTGCGTGTGGAGCAATTGGTCACATGAGAACCAATAAAAACTGCCCCAGCTACCAAGAATCCAACCCGGGTTCCGTGACGGTGGCCATGACAGATGAACAAGTGGCCGAAGAGGAACTCAACATGCCTCAAGATGATCTTGTAAAAGTGGAAGGGACTAAGATCACTCTGGGAAAAGCTTTTCTTGATCAAACTATTGAATTAAAGAGGAAAGCCCTGGTCTTACGCTTTCCGAAAGAGTCTGttCGGAAGAAAAGACGTTCTGGAGTGATGCACTGTGACTATTTAAAGAAACCACGGAAGTCAATCAATCGTCGTAGAGCCAATCCAGAGGTGGCGTTACAAGCCGTGTTTGAAGGaattctcaacaaaatgaaagatGTTGAAGATACGTGGCCTTTTCATCAGCCTGTTTCAGCGAAAACCGTTCCGGATTACTACAGAATTGTTAAGATTCCTATGGACTTACAGACCATGCGCGAGAACCTGAGGAAATGTAAATATTCGTCGCGAGAGGAGTTCCTTGAACACGTGACTTTGATTGTGTCAAACAGTGTTCTCTACAATGGTGCAAAGCACCCTTACACAGTTACAGGTCAACACATGTTGGAAGTGTGCAACAAGTTGCTAAACGAGAAAGAAGATGAAATTATTCAACTGGAGAAAGAGATTAACCCGATGCTCAGCGACGACCCACAGatttcgttttcgtttttccTGGAGAATCTTGTAGCACAGATGAAAGCCCTGCCTGAGAGTTGGCCTTTCCAAAAGCCTGTATCCTCGAAGCAAGTTCCGGATTATTATGACGTGGTGAAGACACCCATCGACCTACTGACCATTAAACAGCAAGTGCAAGGGCACGCTTATCAAAACAGAGACGAATTCATGGCACACGTACGCATGCTCCACAGGAACAGTGTTCTCTATAACGGTGAATTCCACGATTTCTCCAAGATGGCTTTTAAATTAGTCACGTTTTGTGAGGATGCCCTGAAGGACAATGACGAACAACTGTCCAAGCTGGAGAATGAAATTCTCCTTACCCCAGCAGACGACTCATCCTCATACGCAACCAGTCAACCGCCTTCAGTAGCCGGTCCAGAATGGTCAGCGGAAAACAGCATGGAAGACTTTCCTGAAGGTTTTATCAAGGAAGAAGACCTGGACACTACTGGAGACGACATGGGTGAGATAAAAGCGAATGTCAGCACACCTATCTCGGCTGACCAGTCTTCTCGATTGGATGCGGATTTCGACGAGGAGGACGAAGTTGATGTAGAAGGGTACGACGACGAAGGAAAAACTTCACCAAATTACATCAGAGATGGCAGTGGCGAGCCACCGCCACAAGCACAGAGTGAACAAGATTCCCAAGATGTGTCCGCTTTTGAGAGCATTTTACTCCAAGATCTTGAACACAGCGATAGTGAGAGTGACGAAGAGGACGACTTTCCTTTTGGTGATGGTgacgaagaggaagaagaggacATCGACGAAGTAGAATCATTGGGCTTTTTTCCACGTTTAGCGGACAATGACGAGTCGATGGACACGGGAAATTTATCAGGGGATGAGATTTAAAACGTGTTTGTTTATATGACGATGAAACTTCTTTGCCGGTATACTCTGAACAAAAACGGTTTAACTAGTGGACCCTCTACCAACTCTGTTTACATGTAATCCCTTACCACGAGAGCCAGGCGATTTAAAAGGACTGAGGCAATTACCGTCTGTAAAGAAATGGTGGAGTAGAAAATACCAGACTTGTCCTAGTGCGAGAGCGTTAAAGTGTAGATGCAAAGCAAAGGACGTAGAAGGAATTTAAAGAGAGAAACTTAAAACTGAGTCATTCTCTAGCTGCGATATTTCCTGCTCATGATAGAGGGGGTACGGCACATTAATGATAATTGAACACGACGATGGGTTTGACCAGCATTTGACTCTGAATAGGAACCCAATAAAAGAGGAGTACTTATGAAGAGGTTACTTAGCAGTTGTCAGTTACAATTACTTTACCATTTACCCCAGTTGATGACTGACAACCAATTGTAGTTTCTAGTGCCAGTAGCACCAGCTTGCTGGACAGCTTCCCTTTCCCCGGTCCCCCACTTATCAGTGCCACAAGGTGTTTACTAACACTGACCGGGTAATGTAAATATTGTGTACATACAGAAAGCGGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15288 all species →	zf-CCHC_6	Zinc knuckle	Domain	Interproscan
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR041670 all species →	Domain	Zinc knuckle	Interproscan
IPR018359 all species →	Conserved_site	Bromodomain, conserved site	Interproscan
IPR040240 all species →	Family	Transcription initiation factor TFIID subunit 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13900 all species →	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004402 all species →	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006366 all species →	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan
GO:0017025 all species →	Molecular Function	TBP-class protein binding	Interproscan
GO:0051123 all species →	Biological Process	RNA polymerase II preinitiation complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000031679.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.