Gene detail

Detailed information of ENSJQFP00000031701.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

ENSJQFT00000032980

ATGGCGGATTGGGAAGACGAGGAAAGCTCTTTAAACCTCACTGGGTTTTTATTTGGCAATATCAATGAAAAGGGCGAGCTTGAGGACACAGAGATCTTAGACGAGGAATCTCGCCGGCATCTTTTCCAGTTGCGTTCTCTAAGTGGTCTAGGAAACCTTGTTCAGGACATTGCGAAGGAAGGCCATTCAGAAACACAAGACACAGTATCACCAAATGAAACTAGCAGTGATTGGATTCAGAAAGATTCCAGTGCTACAGATTACAGTGATATTGCAGAACttgcagaagaagaggaagaaaaataTTACAAACATGCTGTATCAGTCTTGTCCCAAAAGCACAATAGCCAGGAGAATTATGATAATGAAGATGAATCTGGTGTGGATACAGCTTGTAGTAATGGCCAAGGTCAAGCAGCTATTCCAGGTTTCTTGTTGCCTGCCGTGGCTCCTGCTGCTTCTActctttccaaacaagaacaagATAGACTTGCAATGCCCCCTCCACCACCTCCCTCAGTCTCTGCATTGTTACCAGGGGAGGCCACAGGAGATGCTGACAATACTGGTGAAGAAGTATTAGCTCCTTTGGCGGGAACAATTGGTTCAGAGCTTTCAAGCCGAGAGGGTAAACTTACCACTCATGATGGAAAAACAGTCACAGATCTGTTCCCAGAGTTCCGCCCAGGACAGGTGTTGAGGTTTTCCCGTCTTTTTGGTCCAGCCAAAGCCTCCTCCATGCCACAGCAGTGGCGCAatgctaagaaaagaaaaaagaagaaaaagaaacaaggagaAGAAGGAAAGCCCATATTGGAACCAGTCAGGAGTCCTGCAAGCCCTCGGCCTGAGGACTGCATGTCAGATGATGAGGACAAGCTGATGGCTCCGTGGGAACCTACAGACAGTGAACAAGGAGAGCTAAGTGGTGACTTAAGTATCTCTGGATTCCAAGATTCCAGCAGCCAGAATGTGTGTGAATGGCGGAGTGGTCCAGCAGCACTTTGGTATGAAATGCTTGGTGTGAATGAGGATGGTTCCAACTTAGACTATGGCTTCAAACTCAAGCAGAAAGATGAAGATGCCCCACCAAGCCCTGCATGCCCCGACTCCCTCCCCCCTGAAGACTGTTTTGAAATGGTGTCACAGGTGAACTGGGAGGATGACATTATCTGGTCACTGGATGATGTCAAGCCCAACCTTCAAGCCCAGGCCAGGGCAGGCTGGATCCCTACAGCATCGACACGTACAGCACATGCTTATGCTTTGCAACAGGATCAACTTCTGCAGCAGCTAGGTGTGTATCATCCAGGTCTGGAAACATTTCTGAAGAACACCACCACAGCAATCAAAGCTAATGTCAGCCTTCTCAATCAGCCTACCAAGCCAGGTTCAGCAGTAGCAGAAAACAGCAAACCCTCGGAATGGTTTTCTATCTTTCCAATAGAAAACCACACTTTGATTCATGGTAATTGGGAAGACAAGATCATCTGGGATGCTGAGAACATGCCATCAATCCCATCTCCCACAGTCATGCAACTCGACCCAAATGATGAGAACATCATTCTCAACATTCCTGAAGATTCTGGTCCACTCATTAAAGATAGTTTATCAACCCTCACTCCAAAAAAGGAGCCTAAGAAGTCTAAAATTCTTCTAGGAAAGAGCAACTCTAAAGAGGATGAAGATGACAAAGAACGAACAGGGGAACTACAGAAAAACAAGTTCAACTTGTCAAACGATAGATACTACATAGCAAAACACACTTCTGAGAGTTCTTTGGATACAAGTGGAAGTTCAAATCTTGTGCagCATTCGGTACCTGCCATGGAACTTCAAAGACCACATTTTCCAACATACATGTCAATACAAGATCTGCGTAGCTTCCATCGTCCACTGCTTCAACGTGTTAGCCATGGAGTAATGTCAAAACCAGGAAGACATCCAGTGTTCTGTCTTCTTAAACATATTAAAAAGAAAGCCAGGgaaagagaaaaggaaCGGTTAGCTTCAGGCGGAGGTGAAATGTTCTTCATGAGGACACCATTTGACCTGACAGGAATGGACGGCAACCTTTTGCTGACGGAATATTGTGAAGAATATCCCCCTCTTATCATGGCTGTTGGCATGAACTCAAAAGTTAGGAACTATTATAAAAGGAAACCTGGTAAGGATGAGAGTATGTCTGCATATGAGTATGGTGAGCCAGTACCAGTACATCAGATGTCTCCATTTCTGGGTCATTTGTCACCAGGGGAGTTTCTTCAGGCTCTTGAGAACAATTTGTTCCGAGCTCCCATTTATCAACATGAGCTGCCTGAGACAGATTTCCTGGTGATTAGAAATTCAGCTGGATATTATGTTCGTGATGTAAAGACAATTTTCACTGTAGGACAGCAATGCCCAAAGTTTGAGGTTCCAGGACCAAACTCCAAGAAAGCGAACATCCATGCCAGAGATTTCTTACAGATTTTTATCTACCGTCTGTTTTGGAAGAGCCCGGACACACCACGAAGAATCAAAATGGACGACATCAAAAGAGCATTTCCTATGCACTCAGAGAGCAGTATCCGTAAACGGCTCAAGCTTTGTGCAGATTTCAAACGCACAGGTACCGACTGCAACTGGTGGGTTCTGAAAAGCGATTTTCGTCTGCCAACGGAAGAAGAGATGCGTGCTCTGGTGTCACCTGAGAAGTGCTGCGCATATTACAGCATGTTGGCCGCAGAACAGAAACTTAAGGATGCGGGTTATGGAGAAAAGTCTTTGTTCTCCTGTGAAGATGAAAACGAGGAATCGGAAAACAAAATGGACGATGAAGTTCGCACAGCACCATGGAACACCACACGAGCATTTATTTCGGCAATGAAAGGAAAGTGCCAACTGGCTGTTACAGGATCGGCTGACCCCACTGGGTGTGGGGAGGGATTTTCCTACGTTAGAGTGCCAAACAAGCCAATGGCAAACAAGGTTACTGTAAATAGcataaaaatttcaaaataccatAAGACAGTAACAGGTACTGACGCTGACCTCAGAAGACTGTCTCTGAAGCAGGCTCGTCAAGTTCTGAGGAACTTCAGAGTTTCCGATGAGGAGATTCGTAAGCTGTCGCGATGGGAAGTGATCGATGTGGTTCGAACCATGTCCACAGAGGCCGCCAAATCAGGAGAAGAAGGTATGAGCAAATTTGCTAGAGGCTCTAGGTTTACAATAGCTGAGCACCAGGAGAGATACAAAGAGGAGTGCCAGAGGATATTCGACCTACAAAACAGAGTCTTGTCGTCAAAGGAAGTTCTGTCAACAGACGAGGAAACTAGTAGTGATGAGGGAAGTGATATTGACGAACTGGGCAAAAACCTGGAGAGTATGTTGGCTAACAAGAAATCCAGCACTCAGCTAACGCACGAAGAAGAAGAGGCCGAGAGAAGAGAACTTCAGAAGCTTCTGAGTGAAGAAAAACCCAACAAGGAGTTAGTAAGTGACAAAGGAGGGAAAGAAGCTTTTAGAAAAGAAAGTAAATTCGAAGACGATGACACGGCTTCAGTCACAAGCTACGAGTCCTCTATGGTTGGTCGGCGTCTTCGCATCCAGCGAACGTTCAAAAGTAGTGATGGAAAACAATTTGTTCGAACAGAATACGTCAAAAACCAGGCCGTCATTGATGCCTACCTCAGGTTTAATAAGGACAAGAATATCAGGGCCCAGTTTGCCAGTGTTGATGAAATCCACAAAGAAGAAATTCGAAGAGAGAAGAGGAGGATTCAGGAACAACTAcgaagaataaaaagaaaccaagagaaagaaaagctgCAACcagtaaaaaagaaaaaggaaaagccaCCCAATAATTTGAAGTGTGGTGCGTGTGGAGCAATTGGTCACATGAGAACCAATAAAAACTGCCCCAGCTACCAAGAATCCAACCCGGGTTCCGTGACGGTGGCCATGACAGATGAACAAGTGGCCGAAGAGGAACTCAACATGCCTCAAGATGATCTTGTAAAAGTGGAAGGGACTAAGATCACTCTGGGAAAAGCTTTTCTTGATCAGAAACAATATTTTGTGGTTATGAactatccttttgtgtttgcagttCGGAAGAAAAGACGTTCTGGAGTGATGCACTGTGACTATTTAAAGAAACCACGGAAGTCAATCAATCGTCGTAGAGCCAATCCAGAGCGACAACTTGAGTGCACGTGGCCTTTTCATCAGCCTGTTTCAGCGAAAACCGTTCCGGATTACTACAGAATTGTTAAGATTCCTATGGACTTACAGACCATGTATAGATTGCAAATGGACCTCATTATCATATTCTGTATTGTATTACTCTATTTACACAAGCGTATTGCGAAAGACCTTATTCAGGTAGCCTTTCTCCTTTATTTTCAGAAAGAAGATGAAATTATTCAACTGGAGAAAGAGATTAACCCGATGCTCAGCGACGACCCACAGatttcgttttcgtttttccTGGAGAATCTTGTAGCACAGATGAAAGCCCTGCCTGAGAGTTGGCCTTTCCAAAAGCCTGTATCCTCGAAGCAAGTTCCGGATTATTATGACGTGGTGAAGACACCCATCGACCTACTGACCATTAAACAGCAAGTGCAAGGGCACGCTTATCAAAACAGAGACGAATTCATGGCACACGTACGCATGCTCCACAGGAACAGTGTTCTCTATAACGGTGAATTCCACGATTTCTCCAAGATGGCTTTTAAATTAGTCACGTTTTGTGAGGATGCCCTGAAGGACAATGACGAACAACTGTCCAAGCTGGAGAATGAAATTCTCCTTACCCCAGCAGACGACTCATCCTCATACGCAACCAGTCAACCGCCTTCAGTAGCCGGTCCAGAATGGTCAGCGGAAAACAGCATGGAAGACTTTCCTGAAGGTTTTATCAAGGAAGAAGACCTGGACACTACTGGAGACGACATGGGTGAGATAAAAGCGAATGTCAGCACACCTATCTCGGCTGACCAGTCTTCTCGATTGGATGCGGATTTCGACGAGGAGGACGAAGTTGATGTAGAAGGGTACGACGACGAAGGAAAAACTTCACCAAATTACATCAGAGATGGCAGTGGCGAGCCACCGCCACAAGCACAGAGTGAACAAGATTCCCAAGATGTGTCCGCTTTTGAGAGCATTTTACTCCAAGATCTTGAACACAGCGATAGTGAGAGTGACGAAGAGGACGACTTTCCTTTTGGTGATGGTgacgaagaggaagaagaggacATCGACGAAGTAGAATCATTGGGCTTTTTTCCACGTTTAGCGGACAATGACGAGTCGATGGACACGGGAAATTTATCAGGGGATGAGATTTAA

Transcript

ENSJQFT00000032980

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12157 all species →	DUF3591	Protein of unknown function (DUF3591)	Family	Interproscan
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan
PF15288 all species →	zf-CCHC_6	Zinc knuckle	Domain	Interproscan
PF09247 all species →	TBP-binding	TATA box-binding protein binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR022591 all species →	Domain	Transcription initiation factor TFIID subunit 1, histone acetyltransferase domain	Interproscan
IPR018359 all species →	Conserved_site	Bromodomain, conserved site	Interproscan
IPR041670 all species →	Domain	Zinc knuckle	Interproscan
IPR009067 all species →	Domain	TAFII-230 TBP-binding	Interproscan
IPR040240 all species →	Family	Transcription initiation factor TFIID subunit 1	Interproscan
IPR036741 all species →	Homologous_superfamily	TAFII-230 TBP-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13900 all species →	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004402 all species →	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006366 all species →	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan
GO:0017025 all species →	Molecular Function	TBP-class protein binding	Interproscan
GO:0051123 all species →	Biological Process	RNA polymerase II preinitiation complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03125	TAF1; transcription initiation factor TFIID subunit 1	EC:2.3.1.48 EC:2.7.11.1	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.