Gene detail

Detailed information of ENSJQFP00000031742.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000033022

ATGGCGGCCCACCAGCTAGATGTGTTTAGCTTAACAAATATTGACGAAATACAGCGTGCTTATGCCCAGATTCACCTTCATGAGcaAAAACTAAATAATGAATTGGATGCCATATTAGATAATCAGCCTAGGCTTGACACCAAGATGAATACCTTACAAAATGTTATCCCAAGCCTGCAGCTGGTGATGAGAGATGCACAGCACTTGCACTCAATGATTTCCAACACCTCGGATTTAGCTGAAAAAGTCAGCAGCAAAGTCAGGCTTCTGGATCTTGTGAAGAACCGAGTCCAAGAGACAATCAAGCGAGTTGACGACATTCTCGACCTGAAGGCTTGTGTGGATGGTGTGCAGACGGCACTTAATACGGAGCATTATGAACAAGCAGCTGCACATATCCATAGATATCTGAATTTGGATGAAGATGTCCTGAAAGAGATCACAGGGGATTCCAAAGAAGGTTCTGACATAGCAGGAGCATTCACCTTGCTACATGAAGCAGAACGCAAGCTGAAGAGAATAGTTCATGACAAGTTCGAAGCTGCCATACAAATTGGAGACAGGAACTCTGTGGAAAGGTTTTTCAAGATCTTTCCTCTTCTTGGGCAGCACCACATTGGTCTGGAAAAATATGCAAGATACTTGTGTACCCAGATTGCTGTTCATTGCCAGAAAAATCTTGACAATGCTGTTGCTGCCAAGGAATCCGATCGAAACTCTAACGTGGTGTTTGCCAACACCCTTGCTCTGTTGTTTGAGAACATTGCACGGATAATAGAGGAGCATCGACCATTTGTTGAAACATATTATGGTCCTGGTAAGATGTTTACTCTATTCCAAGCAGTGCAGAATGAGTGTGACATGCAGACTGCTGAAATAGTAGATCAGTTTGTTAAAAAGAGACAGTTCAAAGAAAAGcTCAAATCTGTACAGAGCAGCCAAACTTATAAAGGTTCTTCTGCTAATTTGGAGAGATATGACCCAAGAGAACTTGATGTTGTTCTGAGGGAGGTTGTCCACATGAATGCAAGAGCCGAGATGTATTTAAGATTTCTGAAGAAAAGAATCATTGACGACATAGAAAGCATTCCAAAGGAGGAAAGGACTGAAGaattggtAGCAGTTCAAGACAAGGTCATTTCAAACAGTGGACTAAACAGACGAATGCAGGAACTAATTGGAAACTACATATACATGGAAGAGTATTTCATGAGAGAAACTGTGATGAAGGCAGTCAAGATGGATTCTTGTGAAGGTGGGGCTGATGAGGCTGTCACATCAAGTATGGTTGATGATGTGTTCTTCATTGTACAAAAAGCTGTGAGACGGGCCCTGTCAAGTGCGAGTGTAGATGGCACATGTGCAATGTTAAACCATGCATGTGCTCTGTTTTCATCTGACTATTGTGATGTGTTGACTTCAAGATTAAAAGCTGGGTTCCCATCTGGAAGCCTTGATCTGTCTGGAATGTTACAAGGGAAGCTTCAAGTTGGATATTCATCGACGGCAGAAAATGAAGCAGCAAAAAAGGCCTTTCTCGTGACACTTAACAACCTTGAAGTAAGCAGTAACAACATTCAAAAATTGAAGAAGGATCTTGAGGTAGAGTGTGAAAGAAACCTTGTGTTTGGAGAGCCAGCAAAGCTTAAACTGGAGAGTTGTCTTTCAGATTTGATGAATACATCCAACATTTTCAAGGATTTACTTCAGGGTGGAATCTATCAGCTGTGCTCTACAGCCGTAATACCCAGGGTCAAGCCTCTCCTTGATTGCTTCAATTCAGCAAGTCACAACATATCTGAGGAAGAGTTTGCCTTCTATGAGGTGAATGATCCTTTTGTCCAGAACTTCATCACAAGTTTGGATTCATTGCTGACGTCTTTCAAGGGTCCACTGACAACATCCACCTATGACTCCCTTGTGAGTATGGTTACCACCGAAATAACAACACAACTGGAATCCTCGGTTATGAAGACCTCTTTCAACAGGCTTGGCGGCCTTCAGTTCGACAAGGAGTTGCGTTCCTTGGTTGGTTACTTGACAGCTGTAACGCAGTGGACAATTCGAGACAAGTTTGCAAGGCTTTCGCAAATTTCTACCATTCTGaatctagaaaagGTTGGTGAAATAATGGATTATTGGGGTGCAAACTCCGGTCCAATGACATGGCGTCTCACCCCAACAGAAGTTAGACAAGTGTTGTCTTTAAGGGTGGATTTCAGGATGGAGGACATCAATCGCTTAAAACTATAA

Transcript

ENSJQFT00000033022

CTAGATGTTGTCAAGATGGCGGCCCACCAGCTAGATGTGTTTAGCTTAACAAATATTGACGAAATACAGCGTGCTTATGCCCAGATTCACCTTCATGAGcaAAAACTAAATAATGAATTGGATGCCATATTAGATAATCAGCCTAGGCTTGACACCAAGATGAATACCTTACAAAATGTTATCCCAAGCCTGCAGCTGGTGATGAGAGATGCACAGCACTTGCACTCAATGATTTCCAACACCTCGGATTTAGCTGAAAAAGTCAGCAGCAAAGTCAGGCTTCTGGATCTTGTGAAGAACCGAGTCCAAGAGACAATCAAGCGAGTTGACGACATTCTCGACCTGAAGGCTTGTGTGGATGGTGTGCAGACGGCACTTAATACGGAGCATTATGAACAAGCAGCTGCACATATCCATAGATATCTGAATTTGGATGAAGATGTCCTGAAAGAGATCACAGGGGATTCCAAAGAAGGTTCTGACATAGCAGGAGCATTCACCTTGCTACATGAAGCAGAACGCAAGCTGAAGAGAATAGTTCATGACAAGTTCGAAGCTGCCATACAAATTGGAGACAGGAACTCTGTGGAAAGGTTTTTCAAGATCTTTCCTCTTCTTGGGCAGCACCACATTGGTCTGGAAAAATATGCAAGATACTTGTGTACCCAGATTGCTGTTCATTGCCAGAAAAATCTTGACAATGCTGTTGCTGCCAAGGAATCCGATCGAAACTCTAACGTGGTGTTTGCCAACACCCTTGCTCTGTTGTTTGAGAACATTGCACGGATAATAGAGGAGCATCGACCATTTGTTGAAACATATTATGGTCCTGGTAAGATGTTTACTCTATTCCAAGCAGTGCAGAATGAGTGTGACATGCAGACTGCTGAAATAGTAGATCAGTTTGTTAAAAAGAGACAGTTCAAAGAAAAGcTCAAATCTGTACAGAGCAGCCAAACTTATAAAGGTTCTTCTGCTAATTTGGAGAGATATGACCCAAGAGAACTTGATGTTGTTCTGAGGGAGGTTGTCCACATGAATGCAAGAGCCGAGATGTATTTAAGATTTCTGAAGAAAAGAATCATTGACGACATAGAAAGCATTCCAAAGGAGGAAAGGACTGAAGaattggtAGCAGTTCAAGACAAGGTCATTTCAAACAGTGGACTAAACAGACGAATGCAGGAACTAATTGGAAACTACATATACATGGAAGAGTATTTCATGAGAGAAACTGTGATGAAGGCAGTCAAGATGGATTCTTGTGAAGGTGGGGCTGATGAGGCTGTCACATCAAGTATGGTTGATGATGTGTTCTTCATTGTACAAAAAGCTGTGAGACGGGCCCTGTCAAGTGCGAGTGTAGATGGCACATGTGCAATGTTAAACCATGCATGTGCTCTGTTTTCATCTGACTATTGTGATGTGTTGACTTCAAGATTAAAAGCTGGGTTCCCATCTGGAAGCCTTGATCTGTCTGGAATGTTACAAGGGAAGCTTCAAGTTGGATATTCATCGACGGCAGAAAATGAAGCAGCAAAAAAGGCCTTTCTCGTGACACTTAACAACCTTGAAGTAAGCAGTAACAACATTCAAAAATTGAAGAAGGATCTTGAGGTAGAGTGTGAAAGAAACCTTGTGTTTGGAGAGCCAGCAAAGCTTAAACTGGAGAGTTGTCTTTCAGATTTGATGAATACATCCAACATTTTCAAGGATTTACTTCAGGGTGGAATCTATCAGCTGTGCTCTACAGCCGTAATACCCAGGGTCAAGCCTCTCCTTGATTGCTTCAATTCAGCAAGTCACAACATATCTGAGGAAGAGTTTGCCTTCTATGAGGTGAATGATCCTTTTGTCCAGAACTTCATCACAAGTTTGGATTCATTGCTGACGTCTTTCAAGGGTCCACTGACAACATCCACCTATGACTCCCTTGTGAGTATGGTTACCACCGAAATAACAACACAACTGGAATCCTCGGTTATGAAGACCTCTTTCAACAGGCTTGGCGGCCTTCAGTTCGACAAGGAGTTGCGTTCCTTGGTTGGTTACTTGACAGCTGTAACGCAGTGGACAATTCGAGACAAGTTTGCAAGGCTTTCGCAAATTTCTACCATTCTGaatctagaaaagGTTGGTGAAATAATGGATTATTGGGGTGCAAACTCCGGTCCAATGACATGGCGTCTCACCCCAACAGAAGTTAGACAAGTGTTGTCTTTAAGGGTGGATTTCAGGATGGAGGACATCAATCGCTTAAAACTATAACACGCAAAGTTGCCATTATAATTTTGAGGAATTATATGCAATGTTTACTTCCAGAACATTTCCTTGCCATACCCATCCAAAGTTTTGTGTTTGCCCCCACCCACCACTTTAGCTTTTAAGACCCCCTCCCCCTCAGAATTGTAGTGGCCTTCTCTGAGGGTCGCATGGATGATTTCAGGAATCACTAAATGCAGCTGCGTGAATTCATAGAGAAATATTCCTATTGGTATTTGTTCGATGAAAATAGATATCAAATTTCTGTAACATTCACACTTAACTCCCTcgcttgttttgaaaagaaatggCCAATTGTTCCTAACGCCTGCGCGCACAATTCCCACCGTTATGTCACTGAATTATTTGGATAAGATAACAAAGAAAGCAGTTCGAACATGAAAACTTCACCTCATTTCTGAAGACTTAAGACTTTGAGTTGGAGCATTGGTAGAAAACTTCAATCAACTGTCACTGTTTTATCAGTTATCAAATTTGCTATGTTAGTACAAGTGTTGAAAGAAGACGGCCTCTGGTGGTCTTCGTTGTGAGCTCTTGAAATAGCGGTGGACTATTCACAGATTTAGAAAACGAATATGTCAACTCACATTTACAGTTCGCCGAGCTCACTGGATCCCAAGGTGCTGCGCTTTTTTGCGTCCATTTTACAACGAAGGCGGCCAGATGTTCCGTGCGTAACGACAGcatgtttgaccgctgtgtgcggCTGAACGTGGTCTGGTAATGGGGTAAGAGTGTCGCTTAGAGCTCGCGAGACACCCGCATCCCAATTGTACAGGTCAACCCCACCCATCAGGATGTGTGCTCTCTTTCAAACGTTTTTAAAAGTGCCGGAGGTTGCGACCACTCGTTTGAACCCTGTTGCGGCTGAACGTGGTGTGGTAATGGGGTAAGGGTGTCGCTTAGAGTCAGTCTAGAGAGACATCCCAAATGTACAGATTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20662 all species →	COG4_C	Conserved oligomeric Golgi complex subunit 4, C-terminal	Repeat	Interproscan
PF08318 all species →	COG4_m	COG4 transport protein, middle alpha-helical bundle	Repeat	Interproscan
PF20663 all species →	COG4_N	Conserved oligomeric Golgi complex subunit 4, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048682 all species →	Family	Conserved oligomeric Golgi complex subunit 4	Interproscan
IPR048684 all species →	Domain	Conserved oligomeric Golgi complex subunit 4, C-terminal	Interproscan
IPR013167 all species →	Domain	COG4 transport protein, middle alpha-helical bundle	Interproscan
IPR048680 all species →	Domain	Conserved oligomeric Golgi complex subunit 4, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24016 all species →	CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006890 all species →	Biological Process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0017119 all species →	Cellular Component	Golgi transport complex	Interproscan
GO:0048213 all species →	Biological Process	obsolete Golgi vesicle prefusion complex stabilization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20291	COG4, COD1; conserved oligomeric Golgi complex subunit 4	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.