Gene detail

Detailed information of ENSJQFP00000032407.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000033708

TGGATCGATTTAGCTGGATTTCATCTTCCAATCTTTACGTTTTACCTGACGAGATTGGCATTCAACAGCAGTCTGGCGTCAGAATATACGATGGAGACAAAAAGgatAGAGCTATTTCAGTACCACTGGCTCTTGTTAGTAAGGTTGGAGAACAGGGTGCTGGACTTATGAGCAGTGCAAAGTTGATTGTGCACCTACATCCACCTCCAGCAAATAAGGAGCCAGGCCCTTGTGTCTCTAGTCCATATGGCTGTGTTAAATTCTCATTCAAACAGGGAGGTCATTCTGAGTTCTTTGCCAAGTTAGCAAAGCAGATAGCCAAGAAATCATGGCAGTCTACTGCAACTTCACCATCAACTGGAACAACGATTCAGAATCCATTGACTCAATCTAGAGGCATTGGTGGAATTGTaggaattgaaagaaaaatagaaGAGAAGTCAAAAGAAGCTGATAACTATATTCACAAGGCATTTAAAGATCTGGATGCCCTAATGGAAAAGGCAAAAGAGATGGTTGCCATGGCTGACAAAGTTGCTTCCAAGCTAGAAGAGAAAAAGGGTTCAATTTCTGAGGATGAGACTGTCATGTTTAAATTGTATCTCCTAAGTATGGGTATACCAAATCCTGTTACCAGGGATATTCACGGATCGGGAGCCAGCTATCACAAGGAACTAGCTAAAGAACTTGCCACATTCTTAGACAAAATCATCAAGGATGAGGGTGGAATGATGGCGCTTACCGATGTTTACTGCCGTGTCAACAGAGCCAGGGGGATGGAGCTAGTTTCTCCCGATGATTTAGTAAACGCAGCCAAATTATTTCCATCTTTGAACATCGCCTTGaggTTACGATCGTTTGACAGTGGTGTATTAGTTATCCAGGCCTTGTCACATAGCGACGAAGAAGTGATTCGGACAACTAAGCAAATTCTGGTGGAGAAAGGTTCCGCCACGGCAGAAGAACTGGCGCACTTGATTAAAGTATCCGTCATGTTAGCCAAAGAAAGGTTGTTGGTCACAGAAAACGCTGGCAAGGCATGCCGGGACGATAGCGTGGAGGGCCTTAGATTCTATCCAAACCTGTTTCTCGAGACAGTACAGTGAAGACTGTAACATCAAGATGTGCAACTGAAAGCCAATAGctctctctctcgctctctctctcgctctctctTACTCTGAGATGTAACCACTGCCATATGTGAAGAACATGCGACGGTAGAGTCTTCAGATGCTATCCGGCAATTCAATCGCAGTTCTCTTAAAAATTCTTGTTAATACTTTGCTGGACCTACGTTACTCTAAAATCACAACAAAATTCTTCAGGTGCAATCCGATCAATTTTAATCGCGTATTTGCAAAGTAGAAATACAATCATTTCATTGGGAAAACTGTGTTATAATGTACTGGTGGTTTGCTAATGTAAAGTTCTGTGTTATTTCTTCAAGTTGTCTGCCAATGAAATCACAAATTGCCTAACATTGAAGTAGCAAAGTTATGTAATGACACATCGTCTGATTTATCAGGCGATGATCatgaagaaagcaaaaaaaaaaaaacagccacaAAGCTTCTTCAACAGGCGATGGAAACAAGAAGAATGGCACTGCGGATTATATTATCTTGCGAGTGTGGTATATCGAACAGAAGGACTTTTGTTCAAAAATAACAGAAACGTATGTCCTTATGGTTCCAATTCATATACTAAGACTGAAACTGCCCGGAAAGTAAACTGAAGTATTTGAGGTTTGCATGAAAACCCAAACTCAAACAAAATATGTCTTCGAAAGAATGAATGCCATTCCAGTTTTTTGAATTCTCGATTATTCACAGCTCTTCGCTATTTCTATTCTAGGATCGAATGGATGCCATTCCAGTTTTTTTGAATTATCGATTATTCACagcgtagttactaaaacgaggaaccacccaaaacgacccacaaccatccacaacgatccacaacgaacccaaaacgatccacaacgacccacaacaatgcagttttcaaagccaaatttaaacggagtttaaaaaacattaagacgcttgccgacaatcggcggcagcttttgaatagttttctcgcggcttccttctctc

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|PH\|GLUE · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04157 all species →	EAP30	EAP30/Vps36 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037855 all species →	Family	Vacuolar protein sorting protein 36	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR021648 all species →	Domain	Vacuolar protein sorting protein 36, GLUE domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR040608 all species →	Family	Snf8/Vps36 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13128 all species →	VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000814 all species →	Cellular Component	ESCRT II complex	Interproscan
GO:0031902 all species →	Cellular Component	late endosome membrane	Interproscan
GO:0032509 all species →	Biological Process	endosome transport via multivesicular body sorting pathway	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0043328 all species →	Biological Process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	Interproscan
GO:0032266 all species →	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000032407.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.