Gene detail

Detailed information of ENSJQFP00000033104.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000034445

CAACAATGTGCAAGACTGACGGCACCTGTCAAACTGCATTTGGAAACACGACCTTTACTGCCGAGGAACGCGAAGCTATTCAAAATGTACTTCACCAAAAGCTTGGGCCCGAGTACATTAGTCAAAGAGCGGGAGCGAATGGCCAAAAGcTTGCTTACGTGGAGGGTTGGCGACTAGTTAATTTAGCAAATGAAACATTTGGtttcaatggatggtcacaTTCAGTAACACATCAAAATATAGacttTGTAGATCAAGTTGGAAATAAATACTATGTTGGAGTTAGCGCATTTGTAAAAGTCCAGCTGAAGGATGGCGTCTACCATGAAGACATTGGTTATGGGGTGTCTGAAGGGATGAAATCGAAAGCACTTTCCCTTGAGAAAGCAAGGAAGGAGGCTGTAACAGATGGACTGAAGAGAGCTCTGAAGAGTTTTGGAGAATCCCTTGGTAACTGTATAAGTGATAAAGACTACTTGAAATTCATTACAAAACAGCCCAAATCGATGGGACACCACTTTGATGTCAATGAGATGAGAAGAACAGGACACAGTCACACACTAAGATCCAGGACTCCTCCACATACTAAGAACAGCAGTGGTATAAgtATAAATGAAAGCCAGGCAGTTCAATCAGCCACTAACAATGCCCTTAACATGCTTGCTGACTCGGACGAAACTCacgttttagaaaaaaaagagaatgttgCGCCAAAACAGGAATCTATGAAAGCAAAGGTGGCGAAATCCAACGAGTTAAGAACTGCTGCGGAAAAACGGAACAAGTCCAAGAGTGCATCTTCTCTTGTTCTGTCGGTAAAAACACCTGTTTCTGCATCCACGCCCTGGAGTGCTCAGAGGCAGGAGTCTTTGTCCCTGGCCACACCCATTGGACAAACAGCGCATGGGGGAACGGGTAGTGGGAGTCCCAAAACTGTGGAAAGTACGGAGAGCTTCAGTATAATCCCAGAAGATGACCCGTTGCTGTGGAATCAGTCTTTCGGTTTTGACGAGGCGCTCATATCGTGTAGTGAGGAACTCTTGATACGATCTGTTAACCCTCCTCTTGATCAAAATGATGCTAATTTGAAGACAAGTAGCAGTGCTACCAGTCGTGACCGCGCCACTCTCTCAACGAACGCAATAAACAATCACTTCAAGACTGCAAAGCCCTTTCAACAAGCTCCAACGAAACCTTTGTCGCGAGACTTGAGCCATCAAGAAAACGCCAAACGACGGAGACTTGAACAACAATCAGTAAGGTGATTGCATGAGAAAGTCTTTCATCGGAAGCTCACTGCTCGGTGTCCTGTTCAGTTGAGGATTTTATCATCAGGAAAGGCCCCTTAGTATGCCTTTGTACCCCCCTTCGTTATCCATGGCGCGCGGTCTTTAATTTAGGATCCCTACAGGATCGGATGTTCACTTCAGAAAAAACCCGAGAAGGCTACTTGCAACACTGACTTGCCTCATGTGGTTGGAAATTGTTCAGTGGTAAAAGGAACTGCTTCTTAGCTGTATTTTTCAGTTCTCGAAGTTATTGTCTCCGTAAAAGACTTTGTGGATGAATGGTCGATCGAAGCTTTACCAGGGCTCCGTACTTCACTTAAGACCGTATGCAACCCCCACAGATGCAACGTGCTCGTCTGAACTTTGAACGGCCATCAAGTGCTTGAGATCTCAATTCCTCGTATTTGCGGCTATTCATTTCTCAAAAGTGAACGCTTGCTTTCATTTTTCTCGTAAGTTGCACTTTCCTTTGTACTGAATCGCGAATCACTTCTAATGGTTCCTTAATTCATTTCCTCATGTGCTCCTTATTAACATTTTACCAAGAAAtggttgtttctttctttgataCTTTTAGCAGAGAATCATGactcaataaatgaatgaatttgATCACATAGATGCTTTTAAAAATTGATAAAGACTTTTCTTGTGGTCTTGTGCGAAAAAAAGGGTGCATTTGTTTTCGTGTCGTCGTTATCCTACTACTGATTAAACAAATCGGATCGAATTGGACTccgctcagtcctattaccattatatattattatattggcAAACTGATCTATGACAAAAGGGAGCATTATATTTGGTTGCCAGGAGGAGCCCCAGTTTGCAGTGCATTATGAAccacgtttttcttttttttggtagtTTTGAGTTGTCACATCGTTTCCAAGATgtgtaatatttaatatttgtaATAGTTCGGTTCAACAAAAATTCAGCGCAAATAAAACCACGCAGGCAAAACAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04098 all species →	Rad52_Rad22	Rad52/22 family double-strand break repair protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007232 all species →	Family	DNA repair protein Rad52/59/22	Interproscan
IPR004585 all species →	Family	DNA recombination/repair protein Rad52	Interproscan
IPR041247 all species →	Family	Rad52 family	Interproscan
IPR042525 all species →	Homologous_superfamily	DNA repair protein Rad52/59/22 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12132 all species →	DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan
GO:0006312 all species →	Biological Process	mitotic recombination	Interproscan
GO:0045002 all species →	Biological Process	double-strand break repair via single-strand annealing	Interproscan
GO:0000730 all species →	Biological Process	DNA recombinase assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10873	RAD52; DNA repair and recombination protein RAD52	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.