Gene detail

Detailed information of ENSJQFP00000034087.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000035467

GGAATAAACTCCTTCTTTGCGTTTAAATCGTTTTCAGTTTCCTCGGACTTTCAAATGAAACAGTTTTTGTCTTCTACAATTTTCTGGAGAACCTTCAACCATTTATCGATAAGAGAGGGAGTCTTCAAACTTCGAGATCCCCTTCCTCTCGACCCAGGTTTCCACTGTCAAACAGCCACGTTCAAAGATGGCGGACGATGTAGCACAAGAGGAAACAACGATTGTTAGTGTCAATGGATCTTTTCCTAGTTCAAGACCTCTTAGCAAAGATGAATTACTGAGAATTGAACATGAAAAACTGCATGCCAAACACAAGGGTCACGAAGCCATGCACTTGGAGATGGTCCTTATTCTCTTTGCAACTTTGATAGTAGCAcaagttgttttgtttaagtggAAGAAGCAGCACTTCAAATCATTTCAGGCTGTAACACTTGTTGGGATGTGGCTAATTCCATTGTATTTCAATATCAAACTCAAGTTTTGGCGGATGCTAGCTGCGTGGGTACTTTTTTCAGTAGCTACagcattcatcgttttcaagtCCACGAGAAAGCCATTATCACCTACTACTCCCAGGCTGGTTTACAAGTGGTTCTTGCTGGTCCACAAGGCTACATACGCATTAGGAATAATTGGATATTTGGCGGTTGTGTTCACATTGTTTGGTGTAAATCTAATATTCATGATTAAACCTGAAGTTGCTATGGAATTTGGAGTGACTGTTTTGTTTTACGGCCTCTACTTTGGAGTACTTGGTAGGGACTTTGCTGAGATCTGTGCAGATACGATCGCCTCAAAGCTTGGTTACTACAGCACCAGTGGTCTACCGAGTAGAAGCTTGGAGGTCAACATATGTGCCGTATGTGGTCAGGAACTTGCGTTGCGAAatgagaatgatgatgatgacggacCAGAGAGAACGTATAAACTGTCATGCGACCATGTATTTCATGAATTCTGCATCCGCGGCTGGTGCATAGTTGGCAAGAAGCAGACATGCCCGTACTGCAAAGAGAAAGTAGATCTTAAGAGGATGTTTTGCAATCCGTGGGAGCGTCCACACGTCCTGTTTGGACAGTTATTGGACTGGATACGATACCTTGTTGTGTGGCAACCGATAATTATTGTAACAGTGCAAGTTATCATATATATCTTAGGACTGGAGTAAAAAGCAAATCTACCTTACTAATGTACCATTGAAATTGAAACCAAGATTTCACGGTTGTATTTTACGAAATTGTTATAAAATGGCGAAAAAAAACTCTTATTTGGCAACCTTGGTGAAAAGTTATTTTAGAGGTTCAAGTTTATTGTTaaaagtattgttttttttttggaggagtTCAAAACTGTGGTTGGGTCGTGGCTTCATAGCGGCACGTCGCTGTTTACAGTGTAACCCACAATGCACCGTACTACAGCAGCGACAAAAATGATTTTAACTGTCAAGTGGATAACCGTTGCATGGCGTAGGGAACGCAGTTTTCCAGATCGTTTCCCATATAAGGTGGTCTGATTTACATTTCAAGGCGTTATTACTACGGCCCCAAAAATTCGTTTTAGTTTTGATTTCCAGCAACCAAAGGAGGAAAtgtttttatatatacatatatatatatagtttgtAAGCACGTCCAACGTCTAACTTTGTGCTAATTTGTCGACACATTTCATTGCCGATTTAAGGTCCGGGGACATTGCTTAAAATACGGTTCGATACATATTTAATTTTTGGGGGGAGAGGGAGAAATTGCAAAACTGCCTCATGGAATTGTCAGGCCAAGTTGTGTTTAGGGGTTTCTTTCTGCAGTAAAATAGACCACTTTCACTGCCTGGTTAGTGAATTACACGTataatgggtgacaaattaccccttaattttggcgcgaaatttcagcgtccatttataatttcacatgtgaaattacaaaattgccatagcAACATAttttgtatctcgatcagtgccaagatggcgtcgatatttaagacggtgacccttttagaagttacggaattaaaagaagcggcagaaaactgcgcgaaagagcacaattaactggctGAGGGgttttgagaagttgtgtgacgaaaatagccttgagaaaaacgtGGAGATCATTCTTCtggagcagttggataaagtactcgagcggttttacgcctc

Protein

Pfam domain

No Pfam domain signature was detected for ENSJQFP00000034087.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR040176 all species →	Family	RING finger protein RNF121/RNF175	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13407 all species →	RNF121 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15698	RNF121_175; RING finger protein 121/175	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.