Gene detail

Detailed information of ENSJQFP00000034905.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000036327

TTTGTCAATGGTCGACCACTTCCGGATTACATTCGTCATCGAATCGTACAACTGGCAGCCTGTGGCGTTCGGCCTTGTGAAATTTCTCGTAGGCTGCTTGTCTCGCACGGCTGTGTAAGCAAGATTCTGGGGCGATACTACGAAACTGGCTCTATTCGACCAGGTTCCATTGGTGGAAGCAAGCCTAAAGTAGCCACGCCGCCAGTCGTCAACAAAATTGTGCAATACAAGCAGCAAAACCCGACTATTTTTGCCTGGGAAATTCGCGACCGCTTGGTTGAAGAAGGCGTCTGTGATCGCGAGAACACTCCAAGCGTCAGCTCCATAAATCGCATTCTTAGGAACAAAGCAGCAGAGCGAGCAGCACAATACGCAATGATAGAACGCGAGAGGCAGCATTTGGCCAGTCTGTATGGATTCCATCCCTGGTCTTCCATCTGCGATCCCAGTATGCCATGGTCATGCCACTCACTCCCAGGCCACGAGGACTTCGCGCCACCAGAGATTGAGCGTAGAGGTCTTGAACCCCCGCCACCGTTGTCAATCGTAACGTCATCTGATTGTGTCAACAGCCGCGAAGATCCTACTGAAGGTAAACTGGAATTGTGCACATCTGACTGGGAAATgacaaaacaggaaaaaaaggaaTCCAATCTCCAAACAAGAAAACATGAGCTGGAAAAAGACGACGACAATATAGGCGGTGACTCAGAGATGAACatctccaaaagaaaccatcatcaccacaaaaATATCATTACGGAAAGCGATTGTGCAAGTGAGAATGACAATAAACATATTAGCAGCATCAACGACAACAGTGGCTACAACACTGAAAGCGAAAGTAGCAAAGAAGAAAATGATTCTCAAATTAATCAGAAAAGGAAGATAAGGCGGAACAGAACCACGTTTTCTCCAGAACAACTTGAGATGCTCGAGAAAGAATTCGACAAATCTCATTACCCGGATGTGGCTACAAGGGAGGAGCTTGCGAATAAGATTGAGATGTCCGAAGCTCGAGTTCAGgTCTGGTTTTCAAATCGCCGTGCAAAATGGCGACGCCACCAAAAGATTAACAGCTTACCACACTTTCGTCATTCACTCCTTGGAGGCTGTTACCCAATGTGCACCGAGTGCGACATGAGCGACCGCCAGTGTTCCATGGTCCCAGGCCCCTATAGTCCACCTCTTAACTCTCTTGATCTTCTGTCACCAAACCCTGACAGATTGGTTATTGTTGGCACTTATGATCAAGTTGTGGTGGGCTTTGATGTTATTCGCCAGGAAAGTGAATTAGAGTATAGGTTAAAGCCCAAGTTCGCCGAGAGAGCTCACGCCGGTTGCGTGAAGTGTGTGGCAAATAGTGGGCATTTCCTTGCTACAGGGAGCTCCGATGAAACGATAAGATTGTATAGTTTAAAAGATCACAGAGAATTGGGTACACTGGTGCAACATGAAGGCTCAATTACCTGCTTGACATTTTACAATGACACTCATATGCTAAGTGGAAGCGAAGATCGCACAATTTGTGTGTGGGAGTGCCGTTCGTGGAACTGCCTCAAGACACTAAAAGGCCACAGGGGTCATGTAAACTCTGTATCTGTGCACCCTTCTGGCCGACTTGCACTGTCAGTGACAACTAACATTGTGCATGGTGCATGCACTTTTAACCATTTagaccccaCTGCCCTTCTTGTAAAGTGGTCACCGGGCGGAGATAGTTATGCTGTGGCCATTGGAACAAACGTTGTCGTATATAAACTTGCCACTGCTGCCCTTTCCTTCACTATGGAGTTTTCAAGATATGTGTTAGCCTTGGAGTTCCTCTCAGAAAACATTTTGGCGACAGGAGGAGAGTTTGAAGGGATCAGAATTCTTGACATTGAGAACGAGAGATGCCTCCAAACTGTGAAAGGACATGCAAACAGagtaAAGGATCTTTATATGACTGAAGATTTACTACACCAGGAAGACAAGAGGCTTCTACTATTCTCGGTCTCGTCTGATGGAGATTTGAGAGGCTGGACTCTCAGTCCTGAAAACTTTGGATTAGAAGCCCAGCTCGTAGCGAGGTACGAAGTGCCAGGCAGACCCATGTGTCTGACAGTCGTCGGAAGGAAAATGGTTCGCTCTAGTTTATCGGTGAACACCGAGGCAACGGTTCAACAAACTGACAAAGACGTGAAAGGGAAACCCAAAAAGACCAaacaggaaaagaaagaaacgacCTCAGGAAGTGGACCGGAGaagaaaaaatacaagaaaaagaagaaaaatcaggccaagaaaaagaacatttcGAAGCTCGAGCTCCAGGGCCACGAAGAAGCCCAAGCGAGAGATGAAGGTGTTGCCTCAACAGAGGACCAATCAGCGTCAATGGAAGGAAGTGGCAGTGATAACGAAAGCGAGGATGAAGAAATGACAGACAAGTTGTAA

Transcript

ENSJQFT00000036327

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF00292 all species →	PAX	'Paired box' domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR001523 all species →	Domain	Paired domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR043182 all species →	Domain	Paired DNA-binding domain	Interproscan
IPR043565 all species →	Family	PAX family	Interproscan
IPR017970 all species →	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636 all species →	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000034905.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.