Gene detail

Detailed information of ENSJVNP00000014212.1 in Echinopora horrida

Genomic Location: :...
NR annotation: XP_020621187.1, uncharacterized protein LOC110058866 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000014328

ATGCAGCCCGAAGACGCAGTAGAGCTATTGGAACAAGTATCGCAAATTTCCACCGAGGAGCAAGTTCAGGAGGTTGTGAAGGTTCTCGAGTATCAGCCGCTTGCCTTAGCAGCCGCTGCATTTTACTTGCAATTTGTAAGTCATGGTTCTCCAACCTATGGCTGGACAAACTACTTGGAAAGACTTGCTGCAGGCGATCGTGAAGTAACAGAAGAACCCCTTGCCGATACGAATCCAGCTTATTCAAAAACAATGAGTGCTGCAATTAGACTGGCGTTAGAGAGAATTGTGGAAAGCGATGACGTTCTTCGCCagacatttttctttttgtcgCTATGTGATTCAGAATATCTCCCAATTCAAGCAGCTGTTAAGTTTGTTAATATTCGCACTTCGGGACAGACTGACGAGTTAATCAAAGCAAAGATTTTAAACTCTTCCTTGATTATGGGTTTATACAGTGAAGATGAGGCACCAGGCTATTTAAGAGTGCATAACGTTGTTCATCAAGTGCTCAGGAAAATGCCACTGATGGAAGTCACAGAGAAATATGAGTGTTTATCTGTAGCAGTTCAGGTATTTCACTCCCTTATTAAGTCGGAGCACAATCGTTTACATGAAAGTGGGCGCGGCTGCGTAATGCTACGTAGGATAACGACTCACTGCAAAGCGTTGCATGAAATTCTTTCTTACAATTTTGCTGGAAACGTTGTTTTGTTGAAGGAATTAGCACCCTTCATTTCTGCCGACAACGTCGCTTCGTGGCTTTGTTCAACTGCCTCCGTGTGTTATGAACTTAGCAACTTATCAAACGCATCTCTCTTTTCCAAATCAGCCTATGATTTGGCTCATTACACAAGTAGCACACGAGAAGGCGACTTGATTAAAGCAGACATCTTTGATGTGCATGGGTTAATATTATCAATGACGTGTCAGTATGAATCATCATTATCACACCATTATGAGGCTACCAAGATTTATAATGCAATATACGGTGAGCATCATTGCAAGGTAGCAACAAGTTATGAAAGACTGGGACTTGTTTACAGACAgcttggacagtacaatgagGCGAAAGAATACCAGGAGAAGGCACTGATTATGAGGAAACAAATTTTTGGTGAAGTGCATATTGATGTAGCAGCAAGCTATAACAACTTGGGACTTGTTCATTGGCATGTTGGACAGTACTGTGAAGCACAAGAATACTACGAGAAGGCACTCATCATCTTGAGAAAGATTTTCGGCAACCAACATGCTAATGTCGCAGCAAgctataacaacttggcaacTGTTTATCGGCATgttggacagtacaatgaagcaaaagaatactACGAGAAGGCACTGATCATCGGGATAACGATTTTCGGCCAGCAACATTCTAATGTAGGAGCAAGCTATGACAACTTAGGAGCTGTTTATCGACATCTTGGCAACTTGGGAATTGTTTATCAACATCTTGCACAgaacaatgaagcaaaagaataccacgagaagGCACTCATCATCTGGATGAATATTTTTGGTGGAGAACATGCTAGCGTAGCACTAAGCTACAGCAATTTAGGACTTGTTTGTCAAGAACTTGGCCACTACGATAAAGCAAAACAATACGACGAGAAAGCACTGATCATCAAGAGAAATATTTTTGGCGAGGAACACAGTGATGTTACAGCAAGCTATAACAACTTGGGACTTGTTTATCAAGTTCTAGGACAGTACAATGTAGCAAAAGAGTGCCACGAGAAAGCACTGATCATTCAGCGAAAGATCTTTGGCGTGGAAAACGCTGATGTGGCACTAAGCTATGACAACTTGGGACTTGTTTATCAAAATCTTGGACAGTACGACGAAGCAAAACGATACCACGAAAAGGCACTGATTATCAGAAACAAGACTTTCCGCGAGGAGCACGCTGATTTAGCAGCAAGCTATAACAACCttggaattgtttatcaaaaccTTGGGCAGTACTCCGAAGCAAAGCGATACCACGAGAAGGCACTGACTATCAGAAACAAGAATTTCGGCGAGGGGCATACCGAAGTGGCAGCAAGCTATAACAACTTGGGACTTGTTTATCAAGAACTTGGACAGAACGACGAAGCAAAAAGATACTACGAAAAGGCACTGATCATCCAGAAAGAGGTTTTCGGCGAGGAGCATACCGATGTAGCAACAAGCTATAACAACTTAGGTAATGTTTATTGCCgtcttggacagtacaatgacGCAAGGGAATACCACAAGAAGGCACTAACAATCAGGAAAAAAACTTTCGGCCAGGATCATGCTGATGTAGACGTAAGCTATGGAAGCTGA

Transcript

ENSJVNT00000014328

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25806	APPBP2; amyloid protein-binding protein 2	-	Ubiquitin system	ko04121	deepkoala