Gene detail

Detailed information of ENSJVNP00000017326.1 in Echinopora horrida

Genomic Location: :...
NR annotation: RMX41213.1, hypothetical protein pdam_00013236 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000017456

ATGCCACATTCTTCGGGGTCAGGATCTATAACAGGTTCGGCCAACAGCAATGTCTACAAGGTGCGAGTGCCAAGGAATTTAGCAAAAAACTATTCTGTGATGCGTTTCCAGAGCACAAAAGTAGATTTCTCATCAATCTCAAAGGCCCAAATGTCCCGTCAAACGGAAGCagtagaagaaaaagaaagtgaaaaTCTTCCAGCTTTTGGTGCTGGTAGTGAATTTGGTCGAGAAAGACGTGAAGAGGCACGTAAAAAGCGCCGTGGGTTTGTTCCAAAACCCAAAGATCCCGAGGCAGCACCATGGAATTTGAAGCTTGGTGGCAAAAGTGGGAGGAGGTTTACTGGTCGAAAGGAAGCAGGAATCAATGAGAATTCATCTTATTTCATACTAACTCAGTGTGAGGATGCATTTGAAGCTGTGCCAGTCAATAACTGGTACAACTTCACTGCTGATATCAAATATCAAACTCTAACAGCAGATGAGGCTGAGGAAGAATTTGGTCGCCGTGAGAGAACAGTGAATTATTTTTCTCTAATGGTCAAGAAACGATTAATGGACAACAAGGAGGACTCGGAAGAAGGAGATGAGAAGAACATGCTGGATAAAACTGTTAAAGCAGCCAGTAGGACAGGAAACCTAATCATACATGATGATGAAAGAGACCTCTCTCTGTCAGAGGATGAAGATGATGAGGAAGATGAGGAAGGTCAAGGAAGTGACAAAAACAAGGAAGCTAAACGAGGGAAGAAAGACAAGCATAAAGTTGGTCAAAAACGACAACAAAAGATGAAGAAGGGTTCAGATGCCGACAGTGATGCATCGTCTGAGGAAGATGGCTACCTGGATTCTAAGGAAATGGATTACTTGTCGGACACTTCCGCATCTTCTGAAGAGGCTGTCAAGACTGTTGAAGTGAGTAAACCCAAAGCTGAGGATGACCTAAATGCTGAAGAGACGTCAAGTGAAGAGGAAGATGATTTGACTCGTGAAGGACAGGAACTAAAAGATATGCTTGACAGAGAGGAAGGGAGAGAGTCCtgggacgaggaggaggaggatccTGATCAAGATGATATCAAGGGCACTTCAGCTCTCTTTTTACAAGgtgataagaaaaggaagaagaagtCAGCCAGTGGATCAAGTACATCATCTAACAGCCGTTCATCAACTCCTACAGCTGCTGTGGACAGTGCAGCTAACACTATTGCCGCTGCagcaaacaagcttggtcaagaTCGACCAGGAACACCCTCTAAAAGCAAGAAACGCCCAGCAAGCTCAGCCAAAAAAGGAAACACAGCGGAAGAGGGAAGCCCCGCGTCAAAAAAGCCCCGTGTATCCCCCGCACCTTCTTCGGTGGGGACAGGAGGTGGTTCAAGAACAAGCACTCCAACACCGACCGGCAGCGAGGAAGGCCCTCAGGGGATCACTGAAGAAGCCGTCAGGCGGTACCTCACACGGAAGCCCATGACGAGTAAGGACCTGCTGCAGAAGTTCAAGAGTAAAAGAACGGGACTATCTAATGACGAAACTGTCAAAAAGATTGCGGCTATTGTGAGAAAGCTGCAGCCAGAACAAAAAACCATCAAAGGAAAACTGTACCTTCTTGCTTTATTTTATGGGCTACTAATCTGTTTACGACTGTTATGGGTGACCATACGAAAATTGCAAATTCCGCAGGGGGCTAAGAAAAGAGAAACCCCTCCTTCATGCCTTCTCGACCGTGAGCTAGGAGAGCACAACTTCCTAAGAACAGCTTCAAATTTACGAATTCATTATGTGGCTAAAGGCGACCCAAGCAAGCCACTAATGCTGTGCCTACATGGATTCCCTGAGTTTTGGTATTCCTGGCGATATCAGTTGAAGGCTTTCAGTGATAACTACAGGGTGGTTGCTGTGGATATGAGGGGATATGGTGAAAGTGATCACCCGAAGGGACAAGACCAGTACAAGCTGTCATACTTAGTAAATGACATCAAAGAAATGGTATCTGCTCTGGGGTACAAGTCCTGTGTGTTGCTGGCCCATGACTGGGGGGGCGCTCTTGCATGGAGTGTTGCCCACATTTATCCAGAGCTAGTGGACAAGCTGATTGTATGCAACATTCCACACCCAAAgtgtttgcttgtttgtttcatGCTAACATTAATGTCAGTTTTGTGTACTACCCAAtccattttctctttctctctcttgcagtacatgtttttctttcaattgCCTTGCCTGCCAGAGTTCATTATGGAAATGGGTGACTACAAAGCACTAAGTAAAGGTTTTGGGGAAACGAATAACTTTACCGAAGAAGATGTGGAGGCGTACCTGTATGCTCTGAGTCAGTCTGGATGTAGTGGTCCCATAAACTACTACAGGGCAGCATTGTCATCTGATTTGCCTCGAGGTCACACCCGCACAAAGATCAAGGCCCCAACCCTTGTGGTTTGGggAACAGGAGATAAATATCTTATGACAGAAACCTTGTTAGGAACAGAACAGTATGTGGAAGACTTGACGATCAAATATATCGAGGGAGTAGGTCACTGGGTTCAAGTGGAGGGCTATGAGACTGTGAATAAGCACATTCGTGATTTCCTAAACGCATATCCGCGTGAATCTCTCAAGAAACCAGATTAG

Transcript

ENSJVNT00000017456

Protein

Uniprot

Uniprot term	Description
Q8IUS5	Epoxide hydrolase 4 OS=Homo sapiens OX=9606 GN=EPHX4 PE=1 SV=2
Q6IE26	Epoxide hydrolase 4 OS=Mus musculus OX=10090 GN=Ephx4 PE=2 SV=2
G5EBI4	Epoxide hydrolase 1 OS=Caenorhabditis elegans OX=6239 GN=ceeh-1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan
PF05793	TFIIF_alpha	Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000639	Family	Epoxide hydrolase-like	Interproscan
IPR000073	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR011039	Homologous_superfamily	Transcription Factor IIF, Rap30/Rap74, interaction	Interproscan
IPR008851	Family	Transcription initiation factor IIF, alpha subunit	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13011	TFIIF-ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0006367	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0032968	Biological Process	positive regulation of transcription elongation by RNA polymerase II	Interproscan
GO:0001096	Molecular Function	TFIIF-class transcription factor complex binding	Interproscan
GO:0005674	Cellular Component	transcription factor TFIIF complex	Interproscan
GO:0016251	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan