Gene detail

Detailed information of ENSJVNP00000018863.1 in Echinopora horrida

Genomic Location: :...
NR annotation: XP_015764289.1, PREDICTED: uncharacterized protein LOC107343240 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000019002

ATGGCCGACGGTCAGTCGAACTCGTGCTGTGCGACTTGCACTGtttttctcgttttgtttgCGTGCTTGTTGCCTCTTAGAGATGTACTATCACTCGACGGGAGAAAAGGCTCATTTCTGTCACTGACAACCGCCGCTCGTGTGAATTCTGATGATGTATTTGGAGCTGCTTTTCCTTGTGAGCACTTCTATcgtcgccatcttggattctcACAACCACGTGGCAAGCGATTTTTGTCCTTGAAGATAGCATATTACTCTAATTCCATTGCTGCCTTTCAAGTAATTCGGCTCCTTTCCAGTGGAGACATTTGCCCAATTCCGGGGCCAACTTTGCGTGGAAATGTAGCGGCATGTTCGGTGTGCAGAAGGACTGTTGCTCATAATCATCGTACAATAAATTGTGACCTTGTCATCTTTGGTGTCACATTAAGTGTGGCAAAAGTAACTCCGACTGAATATAAAAGATTTTCAACTACCAGCTTTTCATTGTCCTTTGAAGCACTCCTGATCATACTAAGGATTAACAAGTCCTGGCTTATGGTCATGGGTGTTTACAAACCACCGAAATTCAAATTTAATATGTGGAAGGATCAACTGTATAACTTATTTGAATATGCATCTTCTGCATGTGAGGACATGCTTGTGCTTGGGGACTTAAACTGTGACATCCTTCACCCCTCTAACAATGGAAGTGAAGGTCGTCACTTACTGGGTATGTGTGGAATTTTTAACCTTGATTGTCTCATCAATGAGCCAACTAGGCTGACCCCTACATCTCAAACGCTAATTGATGTTTTATTAACCAACAACAAACGAAGATTTTTAGTGTCCAGAACACTGGAACCTCACGTGAGCGACCATCGCCTTGTTTTTACAGTCATGAAGGCTTCACACAGACACAAGAAATCCATGATGATTACTAGTAGAAGTTATAAGTGCTATGACAAGGAAAAGTTTTTGTCTGACCTTTCAGCTGTGCCTTTCCACGTACCTTTTATCTTTGACAATGTTGATGACCAGGTCTGGGCATTTCATCACCTTTTTAATACTGTTGTCAGTGAATGTGCGCCAGTTAAGCGCTTTCATATTTGCGGTGGACACGTCCGTTACATCACACCAGAATGGAGGCGAGAAAGAAACAGATTATGGAAAAAGTGTATGAAACAACACTCTGAGTCCAGCTGGTCTGACTACAAGAAACAGAGGAACGTTTGCACCTCTTTATGGAGGAAGGCAATTGGTTGTTATTTTCAGAGTAAAGCTCAAGATTCTGTCACCAAACCTCAAGAATTCTGGAAATTTTTTGGCCCTATTTTTAGATCCAAACATAGTCATTCAAATGACATTAACCTGATTGAGGGCAATAACTTCCTAAGGGATAAACAGCAAATTGCCAGCATCTTTAATGACTTCTTTGTTAACATTGCCTCCAGCGTTCATGAACTAAACGACGATCCCTTCAGCAATGGTTCTTCTGATCATTCAAGTATTCTTCATATTAAGAACTTTATGCAAAACAATGACTGTTCTGATAATTTCAGCTTCAAATCCACCAATCCAGTCATAGTTATGGGAGTCATACATAAACTTTCCTCTTCCAAAGCAGCTGGATATGATAATATCCCTGTTCGTCTTGTTAAAGACAGTGCTGGCATTATTGCTGATCCTCTTGCTAAGTTATTCAACACTTCAATATTAAGTGGTGGGTATCCCACTCCGTGGAAGTATGGACAAGTAACACCAGTTTTCAAGAAGGGAGATGAAAATCTAAAATCTAATTATCGACCAATTACTGTGCTAGTTGCATTTAACAACATTTGCGAGCCATACCGCAAACACTATAGCTGCCAGACTGCGCTACTACGTCTGCTTGAGAAATTGAGGACTGCTTTGGACAGTAAGGAGCATGCTGCCATGGTAGGCATTGATCTCTCGAAGGCATTTGACTGCCTTCCCCATGAGTTGTTGTTATCCAAGCTCAAAGCATATGGCCTATCAGAGAACAGTGTAAAATTTGTAGCAAGCTACTTGGTAAATCGATTTCAGAGGGTAAAGATTGGCGATGCCTACTCTACTTGGTTATCCCTTCGTAAGGGCGTGCCTCAAGGGTCTGTTCTCGGACCCTTATTATTTAACATCTTTCTTAATGATTTGTTTCTCTTGCCGACCAACTCTAACATAAATTCTTATGCTGATGATACTCAACTTTTTCTCCATGGATTGAATCCAATTACAACTCAGACCATTCTGCAAAGTGATTTGAATCTAGTATCTGATTGGTTTCAGGCTAACGGTATGACAACTAATCCAAGCAAATGTCTCTCTATGTGGTTAGGAACTAACGTCAACAATCTCCCCATTTCACTTAATGGCATTGTAATCGATATTGCAATGCAACTCCTTGGTGTCAGTATTGATGGAGATCTTAATTTCAATGTTCATTTTACGGAGACTGTAAGAAAGCACCAGTTTACGAGGCAAACGCAGACTAGTTATTTCACGTGTAAATACAAAAAATTATGGTCTTCACTCATTTCGATATCATGTCATGGCACAAAAGAGGTGGCTTTTTTAGAAATTCTTAATGATCATTTTTTAACACAATTAAACTTTATCCCCACCCGTCACGATAGAGTGTTAGACCTCGTAATTACGAACGTGCCGGACCGTGTTCGCGTGCTTGAGGTGCTCAGTGCAAAAGAATCGGATGTGTTCACGGACCATGGCACGGTGTCCTTCGAATTTCACGCTTCTACAAAAGCTActcacaaaattaaaagaacagTGCACGATTATCGTAATGGAGACTTTGCCGGTCTTCGGGGAGCTCTCGAGGCCTTGAATTTATGCAATCTTATTCAAGACAGCGATGACATCAACATGGACTGGACCTACTGGAAGGACACATTTATGAGCGCAGTCTCGGATTTCATCCCAACCAAAAAGATCAAGGGAAAAAACACCCCGCCCTGGATCACAAGTGAAATCATCCACGCTCTGCGGAAAAAAGAGGCTGCTCGCTCTAAGCTAAAGAAGTCTCCTACAGACCATCAACGACAGAAGTATCGCGAACTACGCACAAAGGCCAAGATTCTTATACGCGAGAGCCGTGAGATTTACTTCAACTCACTTGACTCAGATCTCGCGCGGCAGCCTAAACGCTTTTGGTCCTTTTTTAAGCTCAAGAATAAAACGCGGACCTTCCCTGAAACGATGAGCTCGGACGATGACAATCAGCAGGATCCTCAAGCATCAACGCCTCAACAGATCGCTGAGCTATTTAACTCTTACTTTGTGTCGGTTTTCACTGCTCCTTCAGAGATGCACACTTTGTCAGCACCTCTCACGTCCTTACACCCTACATTAAATGAGCTGGAGATCCCGGTGGAAATGGTTTTGACATTTCTCAAACAGCTTGATATAAACAAAGCAACTGGATCCGATGGAATTCCCGTGCGGATGCTGAAGGAAACCGCTGACCAGATCGCACCGTCCCTGACCATGTTATTCAACAAATCCTTGCGACTTGGCATTTTTCCGGGAGACTGGAAAATCGCGAATATTGTACCCATTTTCAAGAAAGGAAAGAGAGACTTTGTGGAGAATTACCGCCCTATTTCCCTTCTTCCTGTTATCTCCAAAGTTCTCGAGCGCTGCGTTTTGGCGGGTCTACGAGACCACATATCCCACCTCATCAGTCGCAACCAGCACGGCTTTTTAGCTGGTAGATCTTGTGTGACTCAGCTCATAAGTGTCTTACATTACATTGGTGGTCAACTCGACGccggtaaacaaatagacattATATATCTTGACATGAGTAAGGCATTCGACAAAGTGGATCACACCAAGTTACTTGAAAGGTTGCAACAATACGGCATTACTGGCAAAGTTCACGACTGGTTCCGTTCATATTTACAGGGACGAAAGCAACAGGTTACAGTTCTGGGAGCTACCTCCCAAGAACTGCCGGTTACATCCGGGGTACCTCAAGGATCCCTGCTAGGGCcaatattgtttctgttgtttgtggATGATCTACCAGATACTGTTAAGACATCGAGAGTTGCCTGTTATGCCGATGATACTaagatttttaaaagcatcgatTCTATCACAGACTGTAATGCCCTGCAATCAGATCTTAACGATCTTGTCAGTTGGTCCGAATCATCTGGGCTCATATTTAATCAGTCCAAGTGTAAATACCAGCGTATCACCCGCAAAAAATCACCTGTACAGTCTATCTACAACATCAACGAAACACCTTTGGAATCTTGCGATACAGAGAAAGACCTTGGTGTGTGGGTGTCAAGCAATCTTACCTCGGACAAGCAAGTGACCGAACAGTGTGCAAAAGCCAATAAACTTCTTGGCTTTGTGCGCCGACTACTTATCGACATAAAACGTGATCCTTAA

Transcript

ENSJVNT00000019002

Protein

Uniprot

Uniprot term	Description
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11592	DICER1, DCR1; endoribonuclease Dicer	EC:3.1.26.-	Chromosome and associated proteins	ko03036	deepkoala