Detailed information of ENSJVNP00000023271.1 in Echinopora horrida

Genomic Location: :...
NR annotation: XP_020615610.1, regulator of nonsense transcripts 2-like isoform X4 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HAU5Regulator of nonsense transcripts 2 OS=Homo sapiens OX=9606 GN=UPF2 PE=1 SV=1
A2AT37Regulator of nonsense transcripts 2 OS=Mus musculus OX=10090 GN=Upf2 PE=1 SV=1
F4IUX6Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana OX=3702 GN=UPF2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02854MIF4GMIF4G domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003890DomainMIF4G-like, type 3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR039762FamilyNonsense-mediated mRNA decay protein Nmd2/UPF2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12839NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005844Cellular Componentobsolete polysomeInterproscan
GO:0035145Cellular Componentexon-exon junction complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14327UPF2, RENT2; regulator of nonsense transcripts 2-Messenger RNA biogenesisko03019deepkoala

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