Gene detail

Detailed information of ENSJVNP00000024314.1 in Echinopora horrida

Genomic Location: :...
NR annotation: XP_020619513.1, tripartite motif-containing protein 3-like, partial [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000024481

ATGGCTGGTGTAGCAACAACAGCTTCATCCAGTAATAAGGAGACGACTAACTATGCTCGCTTGTGTCGTCTCCTGGTTGATGTTGGCACCCAGGCCCTCAGGGACACACTTGATGCCATTCACCTACCAACAAATCTTCACGCAGTTTTGGCGGCAAATAAAACCACCCTTCAGTCTCTCAGATCAAGGACAATTATCAATGCGACGCAATGGGGCAAGCTCTTTCCTGTCATTTCTTCTTCAGTGTCTTCGAGAGACTTCGACACTACTCTTTTGATGGTTCTGTTACGAAATTTGGGTGGCTTACCTTCTCCAATAACCGGATGGGACGCACTTCCCGCTGTAACGGACATGAGTCGCGAGGCGGATATTGCTCGTATTAAGTACTTTAGAAACACCGTGTATGCGCATGCCGAACAAGCTTCGATTGATGACACAACGTTCAAGGCGTACTGGCAAGACATTCGGGGCACTCTGGTGAGACTAGGAGGAGTTAGATACAGGGCAGCTATTGACAATCTGGAAACTGAGTGCATAGACCCTGAAATGGAAGATCACTACAAAAAACTTCTCAGTGAATGGGAAAAGGACGAGGACAACATTAAAGATGAGCTGAAAGAGATCGGTACCAAGATGACACATGTCATGAGAAAACTTGATGATTTAACAGCAGCAACTGTGAGTAACAGGCAGGAATCAGGTGATGAGGAAGGTACGTGTTTGAAACTGGAAGAATTGGGGGACACATTTGTCATGTGTAGAGAGAAACATCACGAGAATGAGTCTCTAAATCATTATTGTCAGAACTGTAAAGTTTGCATTTGCGACAACTGTGGACAAACACGTCATGCAAATCACACCAAGGTGGATATCAAGGAAGCCGCCGAAGAACAAAAACTAAAGATGGCGGAGCTTGTGCAGGAAATGAAACTACAGGTTGCTGAGCACATGACACAAATGGAGAAAACTACAGAATTGTTGaggaaaaacagagaaaaaattaCTTTCGCTCGTAACAAAGTATCAACCACTGTTGAAGAACACATTCGCGTTTTAAAAGAGCACGAGATCGCTATGGTGACCAAGTTAGATGTTATTGAAAAAGAACAACGAAGAGATCACGCAACACAATTAGAACACTTTCAGATATCTGCCACGCAACTGAAAACGTCTTTGGAACATTGCGAAagaattttaaaaggaaacaacACCGTTGAAATTCTTGAAGCGCAGCAGGGAATCATGGAAAGCTGTAAAGGTCTCCTAAGTGCgaggaaaatgaaaatttatcaGCCATCGCATGTTCAGTACAAGGCAAATGAAGAGGTCCATAATGTTAGACGCGTGTTTCTGGGTGAAGTTATTGTTAGCACAACTGATCACCTACAATCAGTGGCGGAAGGGAAAGGCTTAAAACAAGCAGAAGCTGGAAGAGAAGCTAGTCTAACAATTACAACGAAGAATGCAGAGGGACAACAGTGTTATAATGAAATCGATCAGATTGTTGTAAAAGTTCGCAGTCCGTCAGAACAAGACCTCGACACCGACATTAAAGACAGCGAAGATGGTAAATACAGCATCACATACACGGCCAATTGCGATGGACATCATGACGTGGTGATTGAAGTAAATAGTCAACCGCTGACTAGTTGCCCATGGAGTGTTCACGTGAAGCCGCATCAATACCATGCCGTAAGGTCTTTTGGATCACGTGGTACAGCACGAGGAAAATTTGGATACCCCTGCGATATTGCAATAAATGACAAAACAGGGAAAATTGCAGTAGCTGATTCTTCTAATGAAAGAGTACAACTCTTTAGTTCAGATGGAGTCTATTTGACAGAGTGTGGTCAGAAGGGACCTGGTGCTAAGAAACTTAATTACCCTACTTCGGTAGCATTCAGCAGGTATGGTGAGGTCATTATCTGTGATTCTTGTATTTTGTGGTTCAATGAAAGAGGTCAGTTTATTAAAAGCATCTTCAACAGACAATTGATCAAACCAGGAAAGATGACCATTGCTTGTGATGACCGCATGTTAGTGTGCGACCGAGGTGACAGCTCGGTTAAAGTCCTCTCCCCTGATGGTACTAAATTATTACAGTCCTTCAGGGCTCCGGACTGCCATGCGTCCCCGTGTGTAGCTTTACGTCATCAAGACATGTTTTATGTCTCCTATGGCTCAGCTCACTGCGTGAAGGTATTTAATAATGAAGGAGAATTTCTATATGACATTGCCGGCACAGAAGGGTCCAGTGGCCTTCTATGCCCTGTGGGACTCGCCGTTGACAAGTTTAATAACTTGATAATCTGTGACAGTGCAAACGGCACTGTCCTTGTTTCATCACTGGAAGGACAATTTCTACACTGGATAAAAGCCACCGAACTTGACCAACCTTGGGCTATTGCTGTGTCGTCAGACTTTGGACAATTGTTCATTACTGACGTGATAAAACACTGTGTGCATGTTTTTGAGTGA

Transcript

ENSJVNT00000024481

Protein

Uniprot

Uniprot term	Description
Q9R1R2	Tripartite motif-containing protein 3 OS=Mus musculus OX=10090 GN=Trim3 PE=1 SV=1
O70277	Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=1 SV=1
O75382	Tripartite motif-containing protein 3 OS=Homo sapiens OX=9606 GN=TRIM3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001258	Repeat	NHL repeat	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR050952	Family	Tripartite Motif and NHL Repeat Containing E3 Ligases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24104	E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan