Gene detail

Detailed information of ENSJVNP00000029873.1 in Echinopora horrida

Genomic Location: :...
NR annotation: RMX57304.1, hypothetical protein pdam_00020588 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000030101

tctTTGGAAAACTCCCACtccacagCAACTTCATCCAATAAGGAGACGACTAGCTATGCTCGCTTGTGTCGTCTTCTGGTTGATGTTGGTACCCAGGCCCTTAGAAATACACTTGATGCCATTCACGCACCAGCAAACCTTCACGCAGTTTTGATGGCAAATAAACCGACTTTACAAGGTCTCAGATCGCGACGAATTATCAATGCGACGCAATGGGGCAAGCTTTTCCCTGCCATTCCTTCTTCAGTGTCTTCGAAAACCTTTGACACTACTCTTTTGATGGTTCTGTTGCGAAATTTGTGCAGGTTGCCTTCTCCAGTGACTGGATGGGACACACTTCCGGCTGCAACGAACATGAGTTGTGAAGCAGATATTGCCGACACAACGTTCAACGCGTACTGGCAAGACAACCGGGACACTGTGGTGAGACTAAGAGGAGTTAGTTACAGGGTAGCTATTGACAATCTGGAAACTGAGAGCATGGACCCTGAAATTGAAGATCACTACAAAAACCTACTCAGTGAATGGAAAAAGTACGAGGATAACATTAAAGATGAGCTGAAAGAGATTGGAGCCGAGATTAGAGATGTCGGAACCATGATGAGAGATGTCATGAAAAAACTTGATGATTTAACAGCAGCGACTGACAGAAAGCTTAAGGAATCAAGTGAAGAAGAATCGGTGGAGACTTCTGTCATGTGTAGAGAGAAACATCACGAGAATGAGCCTCTCAATTACTATTGTCAGAACTGCAAAGTTTGCATTTGCGACAAGTGTGGACAAACACGTCATGCAAATCACACCAAGGTGGATATCAGGCAAGCCGAAATAAAAGTAGAGATTACTGAGCAAGCGACACAAATGgagaaaacaacagaaatgtTGAAGAAAAACGGAGAGAAAATTGCTGCCGCTCGTGGCAAAGTGTTAACCACTGTTGGAGAACTTATTCGAGTGTTAAAGGAGCACGAGAAAGCCATGTCAACACAGTTAGAACACTTTCAGCTATCTGACACGCAACTGAAGACGTCTGTAGAACATTGCGAAGGAATTTTACATGAAAGCAACAGCGTTGAAATTCTTGAAGCGCAGCAGGGTGTCATGGAAAAGTGTAAAGGTCTCCTAAATGCAAGGAAAATTAACATTTGTAAACCATCGCATGTTCAATACAAGACAAATGAAGAGGATATCCAGAATATAAGACGCGCGCTTCTGGGTGAAGTTATTGTTAGTAAAACTGACCCTTTGCAATCAGTGGCGGAAGGAAAAAGCTTGAAGGAAGCGGAAGTTGGAAGAGAAGCAAACCTAACAATCACAACAAAGAATGCAGAAGGACAACAGTATTATAAGGAAATCGATCAGATTGTTGTTAAAGTACGCACTCCGCCAGAAGAGGACCTCGACACCAACATTGCAGACAACGAAGATGGTAAATATAGCGTGGCCTTCACACCCGAATGTGACGGATATCATGACGTGGTGATTGAAGTTAATGGTCAACCGCTAACCAGTAGTCCATGGCGTACTACTCTCATGGCAAGCGCAACACCAACAGCTTCATCCAGCAAAGAGACGACTAACTACGCACGCTTGAGTCGTCTCCTGGTCGATGTCGGTACCCAGACCCTCGGGGACACATTTGATGCCATTCACGCACCAGCAAACCTTCACGTAGTTTTGGTGGCAAATAAAACCACTTTACAAGATCTCAGATCGAAAAGAATTATCAATGCGACGCAATGGGGCAAGCTCTTCCCAATCATTCCTTCTACAGTAAACTTGTGCGGCTTAACTTCTCCAATAACCGGATGGGACACACTTCCCGCTGTAACAGACATGAGTTATGAAGCGGATATTGCTCGTGTTAAGTACTTTAGAAACACCGTGTATGCGCATGCCGAGCAAGCTTCGGTTGATGACACAACGTTCAACGCGTACTGGCAAGACATCCTGGACACTCTGGTGAGACTAGGAGGAGAGAGATACAGGGCAGCTATTGACATTCTGGAAACTGAGTGCATGGACCCTGAAACTGAAGATCACTACAAACAAGTTCTCAGTGAATGGAAAAAGGACGAGGACAACATTAAAGATGAGCTGAAAGAGATCGGAACCAAAATGATAGATGTCATGAAAAACGAACAAGGTACAAGTTCCAAACTGGTAGAATTGGTGGAAACCTCTGTCATGTGTAGAGAGAAACATCACGAAAATGAGCCACTCAATTATTATTGTCAGAATTGCAAAGTGTGCATTTGCGACAAGTGTGGACAAACACGTCATGCAAATCACACCAAGGTGGATATCAGGCAAGCCGCCGAAGAGCAAAAACTAAAAATGGCGGAGCTTGTGCACAAAATGAAAGTAGAGATTACTGAGCACACGACACAAATGgagaaaacaacagaaatgtTCACGAGAACCGGAGAAAAAATTGCTACCGCTCGTAACAAAGTGTTGACCACTGTTGAAGAACTCATTCGAGTGTTAAAGGAGCACGAGATCGCCATGGTGACCAAGTTAGATGTTATTGAAAACGAACAGCAAAGAGATTACTCAACACAGTTAGAACACTTTCAGATATCTGCCTCGCAACTGAAAACGTCTGTGGAATGTTGCGAAAGAATTTTAGAAGGGAACAACAGCGTTGAAATTCTTGAAGCAAACCAGGGTGTGATGGAAAAGTATAAAGGTCTCTTAATTTCGCGGAAAATGAACATTTATAAACCATCGCATGTTCAATTCAAGACAAATGAAGAGGATATCCAGAACGTTAGACGCGCGTTTCTGGGTGAAGTTATCGTTAGTACAACTGATCCTTTGCAATCAGTGGCGGAAGGGAAAGCCTTAAAACAAGCAGAAGCTGGAAGAGAAGCAAGCCTGACAATCACAACAAAGGATTCAGAGGGACAACAGTGTTATAACGAAATCGATCAGATTGTTGTCAAAGTTCGCACTCCATCAGAACAGGACCTTGACACCAACATTGCAGACAACGAAGATGGTAAGTATAGTGTGACCTACACACCCGAATGTCACGGACATCATGACGTGGTGATTGAAGTTAATGGTCAACCGCTGACTAGTAGACCATGGAGTGTTCAAGTGATGCCGCATCAATACCATCCCGTACGTTCTTTTGGATCACGTGGTAAAGCACAAGGACAATTTTATTGCCCCCGCAACATTGCAATAAATGCGAAGACCGGGAACATAGCAGTTGCTGACGCTGATAGTAAACGAGTACAGCTTTTTAACCCAGATGGAATTTATTTGAGAGAGTATGGTCAGAAAGGACTTGACGCCAAGACACGGCTTAATGCTACAGATTTTCCCATTTCAGTGGCATTCAACAAGTCTGGTGACGTCATCATCTCTGATTCTGGTTATATTTCATGTTTCGCTGAAAACGGTCAGTTCATAAATAACATCTCTAACAAACACTTGGACAAACCACTATCCATAAGCATTGCTCGTGATGGCTGCATGCTGTTGTGTGACATTGAGGGGCCTGGTAAGCTGTGCGGTTGTTCTGGGATTGCTGCTGACAGGTTTAACCATTTGTTAGTTTGTAACAGTGAAAACTGTAAAGTTTTTACATTGGAAGGAAAATTTCTAAACTTGATAATAGAACTGCCCATTACTCTCATGGCAAGCGCAACACCAGCAACTTCATGCAATAGGGAGACCACCAACTATGCTCGATTGTGTCGTCTTCTGGTTGATGTTGGTACCCAGGCCCTAAGGGACACACTTGATGCCATTCACACACCAGCAAATCTTCACACAGTTTTGGCGGCAAATAAACCAACTTTACAGGGTCTCAGATCGCGAAGAATTATCAATGCGACGCAATGGGGCAAGCTGTTCCCTGTCATTCCTTCTGCAGTGTCTTCGAAAACCTTTGACATTACTCTTTTGATGATTCTGTTACGAAACTTGGGGTGCTTGCCTTCTCCAAAAACCGGATGGGACACCCTTCCTGCTACAACAAACATTAGTCGCGAAGCGGATATTGTTCGTATTAAGTGCTTTAGAAACACCGTGTACGCGCATGCAGAACAAGCTTCGGTTAATGACACAACGTTCAACGCGTACTGGCAAAACATCCGGGACACTCTAGTGAGACTTGGGGGAGTAACCTACAGGGCAGCTATTGACAATCTGGAAACTGAGTGCATGGACCCTGAAATGAAAGCTCACTACAAACACCTACTCAGTGAATGGAAAAAGGACGAGGATAACATTAAAGATAAACTGAAAGAGATTGGAGCCGAGATTAGAGATGTCGGAACCATGATGACTGATGTCGGAACCATGATGACTGATGTCATGAAAAAACTTGATAATTTAACAGCAGCAATTGTCACTAACAGAAAGGAATCAAGTGTAGAAGGTAGGTTGTAA

Transcript

ENSJVNT00000030101

Protein

Uniprot

Uniprot term	Description
A4IF63	Tripartite motif-containing protein 2 OS=Bos taurus OX=9913 GN=TRIM2 PE=2 SV=1
D2GXS7	Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca OX=9646 GN=TRIM2 PE=3 SV=1
Q9C040	Tripartite motif-containing protein 2 OS=Homo sapiens OX=9606 GN=TRIM2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR001258	Repeat	NHL repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46844	SLR5058 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan