Gene detail

Detailed information of ENSJVNP00000033059.1 in Echinopora horrida

Genomic Location: :...
NR annotation: XP_020624155.1, aconitate hydratase, mitochondrial-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000033291

TTTCAGGCTGTGTTTTCTGCCCGAGCAGCAGTCTATCATGGCAGACTGTTCACCACCTCATATGTTGCTGCTCAAAAGGTGGCTTTGAGCAAATTTGAACCAGACAAGTATCTGAATTATCAACACTTGGAAGACAATTTGAGAATAGTTCGTGATAGgcTTAACAGGCCTTTGACTCTATCTGAAAAAGTTCTTTATTCTCATTTGGATGACCCAGCTAACCAGGATATACAAAGGGGTGTGTCATACTTAAAGTTGAGGCCTGATCGTGTTGCTATGCAAGATGCTACAGCTCAGGTAACAAGAAATCTCAGGTGTGGCCTTGGTGGTTTGTGTATTGGTGTGGGTGGAGCAGATGCTGTTGATGTTATGGCTGATATACCATGGGAACTCAAGTGCCCTAAGGTCATAGGAGTCAAACTGACTGGAGAGCTTAAGGGCTGGACTTCACCCAAAGATGTTATCCTGAAAGTTGCTGGAATCTTAACAGTAAAGGGAGGAACTGGTGCTATTGTAGAATATTTTGGACCCGGAGTAGATTCCATTTCCtgtacagGTATGGGAACGATTTGTAACATGGGTGCGGAAATTGGTGCCACAACATCAGTTTTTCCATACAATAACAGGATGGAGAAATACCTCAGGGCAACTGGAAGGCCGCAGATTGCCGACCTTGCCAACAAGCATGCTACGTTTCTTCAGTCTGACGAAGGAGCGGATTATGACCAAGTAGTGGAGATCAATCTCAGTGAGCTTGAACCACACGTGAATGGTCCGTTTACACCAGACTTGGCTCATCCCATCTCTAAATTGGGTTCAACAGCACAAGAGAAAGGCTGGCCAATGGACATTAGAGTTGGTCTAATTGGAAGCTGTACTAATAGTAGTTATGAAGATATGACGAGAGCTGCAAGTATTGCACAGCAAGCTCTCAAACATGGACTGAAATCCAGGTCAATGTTCACAGTTACTCCTGGATCTGAACAAATTCGTGCAACCATTGAAAGAGATGGAATTGCAGAGATGTTGAGACAATTTGGAGGAACAGTGTTAGCAAATGCATGTGGACCTTGCATTGGACAGTGGAACAGAAAAGATGTCAAGAAAGGAGAAGCTAACACGATTGTCACATCGTACAACAGAAATTTTACGGGGCGTAATGATGCTAATCCTGCCACTCATGCTTTTGTTACGTCACCAGAGATGGTGACTGCGCTGTCCATTGCTGGTGACCTAAGTTTCAACCCTGAAACAGACTCTTTAACTGGCCCGAATGGTGAATCATTCAAACTTGAAAGTCCTTATGGCGATGAACTGCCCAACAAGGAACCTCCAGCCGACAGTTCATCGGTGACAGTAGACGTAAGCCCTCAGAGTAACCGGCTTCAACTTCTCACTCCATTTGACAAGTGGGACGGCAAGGACCTTGAGGACATGACGATTTTGATCAAGGTAATTAACAATATAGACACAGTTTTGATTTACGTATTGAATGACAAGGTAAACAACATCAAGAATCAACTGACTGGAGAGTATGGAGCCGTCCCTGACACCGCACGAGATTACAAGGCTAAAGGAGTGAAGTGGGTTGCAGTGGGAGATGAGAACTACGGCGAGGGAAGTAGCAGAGAACATGCAGCTCTGGAGCCGAGACATCTTGGAGGACGAGCAATCATTGTGAAGAGCTTTGCTCGTATCCATGAAACGAATTTGAAGAAACAGGGACTTCTGCCTTTGACGTTCGCTAATTCAGCTGATTATGACAAGATTCAGCCTGATGACAACATCTCTTTGTTAGGTCTTAACGACCTTGCGCCTGGcaagcCCGTGAAGTGTGTGGTCAAACACAAAAATGGAGGACAAGACGAAATCCAACTGAATCACACGATGAATGAATCACAGATTGAGTGGTTTAGAGCTGGCTCTGCACTCAACAGAATGGCCGAAGTAGCTGCAAAGTATCCCCGGAGGGAGTTCTCCCTCATGCAAGCCATAGAGGCCGTGTACAGTTTGGCCATTTGGTCCagaatgaaaatgttttctAATCACACtgctgagaagcgtttcaagtGTCCACACTGTGATATGAGATTTAGAGATGCATCTCATCTGGACGAGCACGAGAGGGTTCACACTGGTGTCAAGCCTTATAAGTGTTCTTATTGCGACAAAACTTTCTCAAAGACATCAAATATGAAACTGCATGAGACAATACATACCGGTCTGCTTGAGTACCCCTGTCATCATTGTGATCAAGTATTTAGACATCCATCATCACGTCATGCGGTGCACACAGGAAAAAAGCCATACAGCTGCTCTCAGTGTGACAAACAGTTTTCTGATCAGACAGGTTTCCGCAGACATACAGTTGCTCACAGCACTGACAAGCCATATAAATGCACTGAGTGTGGATGTAGTTACAAACGAAAGTCAAGTCTGAACACACATAACAGATGGAAGCATTGTAAAGAGGATCAGCTGGCACAAGAAAGTGATACAACTGTTGCAGTTCAATGCAAGGTGTACGACAAGAGGTTTAAAGGCCCACCGAAGCCACTATTACACTTGCTTTCTCTCCAGAGAGTGAAAACACTTtccctgagctga

Transcript

ENSJVNT00000033291

Protein

Uniprot

Gene family

Uniprot term	Description
P16276	Aconitate hydratase, mitochondrial OS=Sus scrofa OX=9823 GN=ACO2 PE=1 SV=1
Q99KI0	Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1
P20004	Aconitate hydratase, mitochondrial OS=Bos taurus OX=9913 GN=ACO2 PE=1 SV=4

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00330	Aconitase	Aconitase family (aconitate hydratase)	Family	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF00694	Aconitase_C	Aconitase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR018136	Binding_site	Aconitase family, 4Fe-4S cluster binding site	Interproscan
IPR015928	Homologous_superfamily	Aconitase/3-isopropylmalate dehydratase, swivel	Interproscan
IPR001030	Domain	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain	Interproscan
IPR015931	Homologous_superfamily	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR000573	Domain	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	Interproscan
IPR050926	Family	Aconitase/IPM Isomerase	Interproscan
IPR036008	Homologous_superfamily	Aconitase, iron-sulfur domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43160	ACONITATE HYDRATASE B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003994	Molecular Function	aconitate hydratase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan