Gene detail

Detailed information of ENSJVNP00000038101.1 in Echinopora horrida

Genomic Location: :...
NR annotation: CAH3043215.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSJVNT00000038387

ATGCTTTCCACAAGTGTTCACGCAGCAAGGGGATTTCAGCGAGCTTTTTCTAAAGGTTACGCTCAGAAAGCTTTTCTCTCTCAGGGAATACGGTCGAGCAGTGGAATTTTGAGGAATCAGTCACGAACACACTTGAGCTTTCGTGATTTTTCAAGATGCGCAGTCTTATCACAGTTAGATCCCCAGAAACTCAGAGATGAATGGGGGAAACCTTCCTTCGATGTGGCCCAAATGACGCACTTGTTAGATCACGACAATCACGAAAAGAGAGCGAAATTTCGGAAAATTCTCTCAGAGGATCCACTCATGACCCCAAAGTACAACATTTCTGTGGATGAAGAGAGAGACTTGGCACTGAAGAGACTAAAGAAACTTTGCGACCAAGGGTTTATTTCAGTGTTGGACTTTAAGAACAATCCCCTGTGGATCTTCGCTGCTCATGAATTGGCCGCTGTAGTGGATGCTGCCATGACCACAAAGATGACAGTCCAGTTCAACTTATTTGGTGGGACTGTCTTGAAACTGGGGACAGAGAGACACCATGACAAACTGTTGAAGGGTATTGACTCACTTGAGGATGTGGGATGCTTTGGCTTGACAGAACTTGGCTATGGTAACAATGCAGTGCAGATGGAAACAACAGCAACATATGACAAGGGAACCAAGGAATTTATTGTCCATACTCCAACCCCCCTGGCACAGAAATATTGGATCACAAATGGTGCTTGTCATGCCCATCATGTAATTGTGTTTTCTCAGCTTTACATTGATGGTGTCAATCAAGGTATTCATGGCATTCTGGTTCCTGTTCGAGACAAGAATCTCAATGTGATGCCAGGCGTCCAGATTCATGACATGGGGCACAAAATGGGTCTGAACGGAGTGGATAATGCCAAGTTTTTCTTTGACAATGTTCGTGTGCCCAGGGAAAACCTGATAAACCAGTATTCTGATGTTGCTGAAGATGGAACCtacacaacaaaaattaaaggTGGCATCAGAAATCGTTTTCTTGCAGTGGCTGATCAACTTCTCTCTGGTCGTCTGTGTATAGCCAGCATGGCCCAAGGTGCATCAAAAGCCTGTCTTGCCATCGCCCTTCGCTACTCTGCCACTCGTCTGACTGTAGGACCTGATGGAAAATCTGACACTCCCATTCTCAAATACCAGCTTCAGCAAAATGCTCTGATGCCATTGCTTGCATCTACCTACGCCATAGACTTTGCACTGCAGTATGTCAAAGATCGCTGGGCCTTTCAGGCTGCAGATGGGTCTGAACATGCAGATGTGGTGACAATGTGTTGTGTTATCAAGGCCATTGCTGGCTGGCATGTGTCTGAGACAGCTACTGTTTGCCGTGAGAGGTGTGGTGGGCAAGGATATCTGTCATGCAACAAGTTTGGCATTGATGCCGCCCTGTCACATGCTTGTATGACAGCAGAAGGTGACAACTCAGTCCTTATGCAAAAGGTAGCTACCGAAAGACTGATGGTGTTCAAGCCTACTGAACATCAAGTTGTAGATGGTGATGAGGCAGACCTGAACAACCAGGAGTATCTCCATTCCTTGTTGGAGTCACGTGAAAACAAACTTTTCATATCTCTAGggatgaagatgaagaaagcagggaaggagggaaggttTGACACCTGGATGTACCAGGAGCAGGATCTTGTCCAGGCAGCTGCTCATGCATATGGTGAGCGGCTCATCAGTGAGACCTTCAGCAAAGCCCTTGATAAAGCTGACCCTGGTCTACAGCCAGTTCTGAAGAAACTTCGTCATCTCTATCAGATGGCAGTCATCAAAAAGGATCTTGGCTACTTCACGACCTCTGAGCTGATGTCTACAGCCACTGGCGCAAAAGTAGGGAAAGTAACTGCTGATCTGTGTCGTGATGTGGCACCGCAGGCTCTTGCCCTCTGCAATGCTTTTGGTATCACTGATGAAATGCTTAATGCTCCAATTGCAAGAGACTGGGTGGAGTATAACACAGTGGACAACCAGGGAGAAGTTGAAGCTGTTAAACGTGCCTTTTGTGCCATGTACTCCGAGTGGGTTTCTTTGCGAAACACTCTACAGCGTGACCGCAAGAACAGAAGCGTTTTGCACAACTTTCCTCCCTCCGTGGGAAGGGATGTGGCACATACGGTCGTCAAGACTCTTGTTCAACCTGGTAGTCAAGAACAAATGGCGCTTCGCACAGAAAGAGAGGTTGACTGGGTCATGGACGTCTTGTGTTATGGCTTGACACTTCAAACGACAGAAAGCGATGGCGAGATCGTGAAAGGTTGTGTCAATATCTACTTAGACTGGATCTCGGTCTTGGGAAATCCCAAGAAAGGGATTCCCCAACCGTTGCTAAAAGCGCCAGAGAAATACGCTAAAGAAATCTTTCAACATTTTCGTAACCTTTTTGTGCGAAGGGATGAAGGGAATCTTGCATTGCAAGCTTCTTTGTGCATCAGAGTACTGCAGGTGATTCAAGCTACGGCGTCTGAGGCCAAGATGTCACCCTTGACGTGGGAGGCGTTGCTGAAGTTTTTGATGATTATTAATGACATGCTTCTGTCACCACCGAACACTTCAGGGGGTCTTGCAGAACACTTGTGTGAGAAATTGATCAGTGTTTTGCTTGAAGTGTGGTTGCATGCCAGCTGTCACCATTTTCCTGCCCCGTCAATGTGGAAGACTTTGCATGAGCTTTGTGTTTCATGGCGGCATCACAATTCAATGATAGACTACTGGAGTAGAACATCCCAAGCTCTCACAAGAAGGGTAATACAGTATATGTATGGCCCCAGCTTTCCTCTTCCTCCACTGCCAGCCAGAAAGAGTGATGTCCGACTGCCAGTGAACATTGGTGATGAATGCCTCATTCAGTGCTGGTTCAGAGTTCTTCATATCATTGGGAATCCTGTGGACCTCTGCAAGAAAGAGATTATCAGCAATACACCAAAATTCAAAGAGTTTGCATTGTCAAGTGAAGAGGTGATCACACCATCGGCTCATCCCTGCTTGAAGACACTTCCACAAAACTTCTCGCAAGCAATGAAAGGGGCAGCAGTTCTCGTTAATGCCTTCCTCGCCATTACAACAACTGTAGAGGAACCAGTGAAACACATACCAATACCAGCACCAACGAAAACTGCAAGCCCTCCAGTAGCCAAGAAACGTGAGCAGAAGTCCTTGAGCATTGGCTTAGCTCTGGGTTTAACTGATGCTGCAGGACTAATATTTAGATCCCAAACTCTTCCATCTCGGCCTAGCAGTAGTACCTCATCTACTGGGCTGCCGCATTTAGAACCATTCCGTGAAGACCTGTCCAGCATGCCCTCGACttcatttttgtttccaagatCTCATCTACCTGACACGCATAAACCATCAGGGGATAGTGTACTCCATTTGTTTGGAGGGTGGCTTTTTGAGGCTATATTTGCTAAGCTGGACATGACAGCAAACTTCAATGCTCTGGGAAAGATCTATGATGGCTTTGTTTCAAATTCAGCTCCAGTTGAAAGTGCAGGAGTGACCAAGGCAGGTGTAGGTTTGGTTGGCCATGCCATGGACAGAAGATTTGAGCCAGGCAGGGCTGAAGCATATGGTGCACTATGTCGGATCTTTTGCAGTCATCGCTCTGATCAAGAGGTCCGACCTGTTTACCTGTCAAGGTTCTATTTAGCTTTGGCTACTGGATTGTTGTATTCAGAGTCCTGCACTGGTCATGTACTCTGCAGCATATTGCTGAACTCAGCTGACTTGTTGAGAGTGGATCTGCAAGGAGTGCAAGTGTTGTTACCGCACCTCATTACTGCTCTAGAGACTGTGCTGCCAAGAAGTGATATCCAGATAGGGTGTAACGTGTCCACCACTGAACTTCGCAGGGCAGCCATCCATTTGCTGTTATCTATGCTGTGCTTGCCACTGCACTTTCAGGATCTTGCTATAAAAGACATGACTGCAGGATGGAGAAAGAAGCATGCTGGCAAACAGAGCAATGATGAACCACAGACTCTGACATTTATCTCCTTGAAGCCTCGACTGATACGACTGTTGCTTGAAGCTCTTCAGTGTGAATCAGACTCGTTCAATGTCCAGATATTGTTGGGAGGTGTGTCTCTGCTAATTCAAGACAGTGAGATTGCTGAGACCTTTGGGGTCTCCTCCCCTAAGCAAACTGAACCCCCTGTCAGGGTGAGTGATCAGTTGCAGTCTTCACAGGACAACAGGCGTCGTGCCAGCACTGGTAGCAGCTCAGTTTCTGATGCAGGCAGTACTAATGAAGTGGATAATGACAGCAGGATTCAATATGATCATTCTTTTAACAAGTCATATGACCTCTCAAAAGTGCAAGGCCTGTTTGTACAGTTGACACATCTCTTGTGTAACAAGCTGGTTGTGATTAGAAGCAGTCGATGGAAATCTGATGTTCATATCACCCTAGCTGCCTTTGAGCTGCTGTCTGGCCTGGCACAACTTAGCATGAGCCATTTGGATCAAGCTGAATGTAAGAGCACAATTCATTGGCTGTGTGACTATGTCACATATCAAGCCAATAAGAAGGCAACACATCACTCACGTGACCTTCACTCCATGATAGTGGCAGCGTTCAGCTGTCTTCAGTCCTGGATAATGTCACATCCGTGGCTACTGGACAGCCAGgGCTGCTTGAATGTTGTCATGGAAGTGGTGGAATTGGGAATATCAGGAAGCAAATCCAGGGAAATTCCAAGAGATCCTCAACTTGCAACAGACTCTGGCCCCCGACTGAAAGGTGACAAAGAGTTAAAACCTGTTTCTTTCCGAGTTCGAGAAGCTGCTGAAGGATTGCTGACTGTTATCATGGAACATTTGGGAGCTTTTCCTTCACCGTGTGGTCCAGCGGCTTTGTCTTCTCTTTTGGATGAAGAATGGGTTCTGAATCATGTCCAGTCAAGTGATTCCCCCACAAAGACATGTCGTAAGTTCCAATACTTTGCGATTCAAGATAGCAGTATTATTATGGGATTGCTGGAAGAATCTCTCAAAGCCAAAGACACACTTCCGACCCTGTCATCCGTTGTCCGTGGACCAGCAGGTCGTTATGTGTGGACCATGCAGTTGAGACAGTTCTCACGAGAGAAAAATGACTTGATTGAAGCCCACCTGAAGAACCCAGGCCGTCCGTCCCCAGACAAGACCCAACCTCGCCCACCACCGAACGTAAAACGCAGGGCCTTTCCTGAGGCTGTGGATGCAGTGCCTCTCACTAAGGCAGACCGCAGTATACCTGCACTAGATGAAATTTTGGACGCCAAACTCAGTGAAGTGCAAGATCATATGCGAACTCTGATGCAGAAACAGCTGGAACATGAAACAGTGGCTCAGACCAAGTTGGATGAAGAGGAAGCCCGTGTCCAGTTCCCGGATAAAGAGACGGAAATAAGACCACCCCGGCCTTGCCAGGACTTTAATCCGTCCCGTCTGATGCTGTCCCACTTTGGTTTACTGACTATTGAAGGACTGAAGGGGAACCCAGTGCGGCCATTTGAAGAGGCCAGTCTGTTGGCGTTAAATTCCACCTCAGAGGGACTCTCAAAAGCCCTCAGAGAACTGGATCAGGTGGCCACGCGGACACAGGACACAGTATTGGTGTTTTACGTGAAGTCAGAACAGGGAGACGCGCATGAAATAATCGAGAATCAGATCAATTCCTGCAAGCACGCCAAAGCGTTCAAAGAGTTTTTACTTTCGCTTGGATGGCCAGTCGACGTAGCCTCGCACCCAGGTTGGACAGGAAACATCCAAGCGGCTTGGAACCAAAGCAAGAATGATGACGACAATGTTACGCTGCGCGCATGTGACAGTCCTCTCCAATCCTCTCGCAGCATGTCGACCCTCACGGGCAGCGAGGAACGAGTCGTGTCTGGGATCGAAAACGACGGCTTTCATGATGCTTCTGCATCCCGTCAGGAGAGTTCTGACAGCGAAGCATCGAGGAGTGGGATGAATTCTCCCGCCTTGGGCTCCTCTGCTACTCATCCGCCGATAGAAAAAACGGTCGTGGATGAAATTTTCTATTTCGCAGACGTCAGCTGTGAAGTAGCTTTCATTATGCCCTCCATGCTTCCGCGGTATCAGCGCTTCCGGAGCATGACGTCACACAACGAGAGCTGTGACGAGGATCTCGGGTTTGTTCGACGGCGAAGAACTCGTTCGGGAAGCACAGGAAGCTTGGAAACGATTAGCAGTGGTAGTGGAGGTCAGTTAGATATCAAAGGCAAGCTATCTCGTCAGGCTTCGGAAGGAACGGCTGTGTACGAGTTTCAGAGCCGTGCCATGTCCTTAGACAGTCGACCGCTGTCCAGGCTGAGCACGCACAATACATCATCGGAGACGAACGTGCTGGTGGCCTGGCTCGAGCGGTTTGAGGACCATGCGCAGTTCCCAGTAGATGAGCTGTTGATGGAGTTTGATGTCAGTCGCACTCAATCAGCACGCAGCTTGCTCGAGAAAGAAACTGTGGTTATCTTTATTCATCATCTGAGGAGCGGTCTGTACCGCATCCATATCAGGTCCACCATCAGGTCTCCTATTGGCGGGCCACTTGTAGACGGTATGGTGGTTAGCCGCAGGGTCCTGGGTACCATGGTGCGACAGACCGCTCTCAACATTTGTCGGAGGCGCAGACTGGAAATTGATTCGTATTCTCCTCCCCAGGTTTGCCGTAAAGTCAAGATTCAAGATATAGTGAAGAAATACCGGCACCAGTATTCAGTGCCTGATTTTTACGTGTCGCTGTTCCGCAACGGGGTTAATTAG

Transcript

ENSJVNT00000038387

Protein

ENSJVNP00000038101.1

MLSTSVHAARGFQRAFSKGYAQKAFLSQGIRSSSGILRNQSRTHLSFRDFSRCAVLSQLDPQKLRDEWGKPSFDVAQMTHLLDHDNHEKRAKFRKILSEDPLMTPKYNISVDEERDLALKRLKKLCDQGFISVLDFKNNPLWIFAAHELAAVVDAAMTTKMTVQFNLFGGTVLKLGTERHHDKLLKGIDSLEDVGCFGLTELGYGNNAVQMETTATYDKGTKEFIVHTPTPLAQKYWITNGACHAHHVIVFSQLYIDGVNQGIHGILVPVRDKNLNVMPGVQIHDMGHKMGLNGVDNAKFFFDNVRVPRENLINQYSDVAEDGTYTTKIKGGIRNRFLAVADQLLSGRLCIASMAQGASKACLAIALRYSATRLTVGPDGKSDTPILKYQLQQNALMPLLASTYAIDFALQYVKDRWAFQAADGSEHADVVTMCCVIKAIAGWHVSETATVCRERCGGQGYLSCNKFGIDAALSHACMTAEGDNSVLMQKVATERLMVFKPTEHQVVDGDEADLNNQEYLHSLLESRENKLFISLGMKMKKAGKEGRFDTWMYQEQDLVQAAAHAYGERLISETFSKALDKADPGLQPVLKKLRHLYQMAVIKKDLGYFTTSELMSTATGAKVGKVTADLCRDVAPQALALCNAFGITDEMLNAPIARDWVEYNTVDNQGEVEAVKRAFCAMYSEWVSLRNTLQRDRKNRSVLHNFPPSVGRDVAHTVVKTLVQPGSQEQMALRTEREVDWVMDVLCYGLTLQTTESDGEIVKGCVNIYLDWISVLGNPKKGIPQPLLKAPEKYAKEIFQHFRNLFVRRDEGNLALQASLCIRVLQVIQATASEAKMSPLTWEALLKFLMIINDMLLSPPNTSGGLAEHLCEKLISVLLEVWLHASCHHFPAPSMWKTLHELCVSWRHHNSMIDYWSRTSQALTRRVIQYMYGPSFPLPPLPARKSDVRLPVNIGDECLIQCWFRVLHIIGNPVDLCKKEIISNTPKFKEFALSSEEVITPSAHPCLKTLPQNFSQAMKGAAVLVNAFLAITTTVEEPVKHIPIPAPTKTASPPVAKKREQKSLSIGLALGLTDAAGLIFRSQTLPSRPSSSTSSTGLPHLEPFREDLSSMPSTSFLFPRSHLPDTHKPSGDSVLHLFGGWLFEAIFAKLDMTANFNALGKIYDGFVSNSAPVESAGVTKAGVGLVGHAMDRRFEPGRAEAYGALCRIFCSHRSDQEVRPVYLSRFYLALATGLLYSESCTGHVLCSILLNSADLLRVDLQGVQVLLPHLITALETVLPRSDIQIGCNVSTTELRRAAIHLLLSMLCLPLHFQDLAIKDMTAGWRKKHAGKQSNDEPQTLTFISLKPRLIRLLLEALQCESDSFNVQILLGGVSLLIQDSEIAETFGVSSPKQTEPPVRVSDQLQSSQDNRRRASTGSSSVSDAGSTNEVDNDSRIQYDHSFNKSYDLSKVQGLFVQLTHLLCNKLVVIRSSRWKSDVHITLAAFELLSGLAQLSMSHLDQAECKSTIHWLCDYVTYQANKKATHHSRDLHSMIVAAFSCLQSWIMSHPWLLDSQGCLNVVMEVVELGISGSKSREIPRDPQLATDSGPRLKGDKELKPVSFRVREAAEGLLTVIMEHLGAFPSPCGPAALSSLLDEEWVLNHVQSSDSPTKTCRKFQYFAIQDSSIIMGLLEESLKAKDTLPTLSSVVRGPAGRYVWTMQLRQFSREKNDLIEAHLKNPGRPSPDKTQPRPPPNVKRRAFPEAVDAVPLTKADRSIPALDEILDAKLSEVQDHMRTLMQKQLEHETVAQTKLDEEEARVQFPDKETEIRPPRPCQDFNPSRLMLSHFGLLTIEGLKGNPVRPFEEASLLALNSTSEGLSKALRELDQVATRTQDTVLVFYVKSEQGDAHEIIENQINSCKHAKAFKEFLLSLGWPVDVASHPGWTGNIQAAWNQSKNDDDNVTLRACDSPLQSSRSMSTLTGSEERVVSGIENDGFHDASASRQESSDSEASRSGMNSPALGSSATHPPIEKTVVDEIFYFADVSCEVAFIMPSMLPRYQRFRSMTSHNESCDEDLGFVRRRRTRSGSTGSLETISSGSGGQLDIKGKLSRQASEGTAVYEFQSRAMSLDSRPLSRLSTHNTSSETNVLVAWLERFEDHAQFPVDELLMEFDVSRTQSARSLLEKETVVIFIHHLRSGLYRIHIRSTIRSPIGGPLVDGMVVSRRVLGTMVRQTALNICRRRRLEIDSYSPPQVCRKVKIQDIVKKYRHQYSVPDFYVSLFRNGVN

Uniprot

Uniprot term	Description
Q86X10	Ral GTPase-activating protein subunit beta OS=Homo sapiens OX=9606 GN=RALGAPB PE=1 SV=1
P86410	Ral GTPase-activating protein subunit beta OS=Rattus norvegicus OX=10116 GN=Ralgapb PE=1 SV=1
Q8BQZ4	Ral GTPase-activating protein subunit beta OS=Mus musculus OX=10090 GN=Ralgapb PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01756	ACOX	Acyl-CoA oxidase	Family	Interproscan
PF20412	RALGAPB_N	RALGAPB N-terminal domain	Domain	Interproscan
PF02770	Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR002655	Domain	Acyl-CoA oxidase, C-terminal	Interproscan
IPR046859	Domain	Ral GTPase-activating protein subunit alpha/beta, N-terminal domain	Interproscan
IPR035974	Homologous_superfamily	Rap/Ran-GAP superfamily	Interproscan
IPR039930	Family	Ral GTPase-activating protein subunit beta	Interproscan
IPR000331	Domain	Rap/Ran-GAP domain	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan
IPR006091	Domain	Acyl-CoA oxidase/dehydrogenase, middle domain	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21344	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0003997	Molecular Function	acyl-CoA oxidase activity	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0051056	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan