Detailed information of ENSJVNP00000046373.1 in Echinopora horrida

Genomic Location: :...
NR annotation: KAJ2906028.1, pre-mRNA splicing factor [Zalerion maritima]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O13900Pre-mRNA-splicing factor sap114 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap114 PE=1 SV=1
Q15459Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1
A2VDN6Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12230PRP21_like_PPre-mRNA splicing factor PRP21 like proteinFamilyInterproscan
PF01805SurpSurp moduleFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035967Homologous_superfamilySWAP/Surp superfamilyInterproscan
IPR000061DomainSWAP/SurpInterproscan
IPR045146FamilySplicing factor 3A subunit 1Interproscan
IPR022030DomainSplicing factor 3A subunit 1, conserved domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0045292Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12825SF3A1, SAP114; splicing factor 3A subunit 1-Spliceosomeko03041deepkoala

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