Gene detail

Detailed information of ENSKFPP00000001680.1 in Condylactis gigantea

Genomic Location: chr10:9428920...9443711
NR annotation: XP_031568573.1, protein FAM160B1-like isoform X1 [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSKFPT00000001832

atgctgtcAACGTtgaagcaagaagaagaagcagctTCTGGTGGCTCTACAGGCCCTTGTTTGGAATATCTTCTTCAACACAAGATCCTCGATACTCTACACACCTTAGGAAGGGCTGATTGTCCTCCAGGAATGAAGCAAGAAGTGTTATCATTCTTTGCTAATCTGCTGGCCAAGATGAAACAGCCTCTACTGCCACACGTCAATGTCTACAGACCTGTGCATAGATTGATTCGTCTGTGTGGTGAGGTGCGTGCAGCTCCTTCTGAGAATGAGGAAGTTCACTTTCTCTGTACAGTGTGTTCCAAACTGAGACAAGACCCATATCTTGTGAATTTCTTTCTTGAGTTCACCTCTATCAATGCCTGTTCTTGTATTGCCTGTCAACAATCACACAATAAAGACTCTTCTACTAGTAACACATGTACTACTTCTCCTGTTTGTACTAGTAGTTTATCGCAGTCAATAGAGAAAAAAGCTGCAGAATCTGGAAATGGTCAAGATTCATCAATGCTGCAAGACACCAGACGAAGGGACAAGCCTGATTATACATTGGTCAACTCTTTGCTTAGCATGACCAAAAGTGAGgATAGCAGAATAGCAGTCAAGGCTTGTGAAGGACTTCTGTTGTGTGCATCTTTACCTGAGGACCATGCTGCCACTGTTATCATCCTCTATACACCATTCTGTGAGATTATGGCCGATAGATTAAATCCCTTGTTCCAAGCTCTTCCACAGTCCATGGATCCTACGGACATAacaaatgcatctgcaaaGTGGGGCCTTGATCacattgataatgatgaagacaTATCAATCTTTCCTGGCAAAAGGCAGCTGATATCATTTTTGTCCTGGTTTGATTACATTGATCAACTGGCCAAGAATTCTCACAAGTTAGTTGCCAAGGCCCTTGCTGTCAGTGTAAGGGAGAGGTTCCTTCAGCCTCTTGTTGAACCACGTTTCATGCAGCAGTCAGAGCCTGGAATCATTACAACCACAGCTTTAATGAGGAGATGTTTCAAATCTATTACTTCCAATCACCTGTTGACAGAGTTTTCCATATTTCTTCTTGGTGAAAGTACTATTCCTGAGACACAATCTCCAGCTTTGGATGGTCACAAGCTTCGCCAAAAACTGATTGAACGATGTGATCATATCAGTGATGAGTTGAGCATAGAAACACTGAAGCTATTTGAAACTCTGCTCCTCAAACCAGCCCAAATAATCCTTGACAACTTAGTGCTCCGTAACCTGACCAGCAGAAGGTATTCTAGTACGCCTGGTCTAGTAAATGGTGATATGACCAACAATACACCCCCCTCACCTAAGACACCAATATTGCCTCCTCTGACCCCTGATGGGAGGACATCACCTACATTAATAACAAGTGCAGGAGATTCAGAGAGGGAAGCAGTAGTCAAAACTGTAAACAGTTTCTTATCTCTTGTACCTGAACAAGTCAAGTCTTCAGCATTAACGGGAGACATTGGTTATGATACATACCTAAGAGATGCACATAAACAGTTCCGTGACCGTGCTTTACAGTGCTGTCAGTTCCAGTGGCCAGCGTCAGCTTCACCAACAAATGATGAAGATGCAAGAGAGGCTTTTTATGAAGGAGCTTTTTTAAATATGTTGTTTAAAAAACTCCAAAGATTGCTTGATCAAACTTATGAAATGAACCTGCAAGTCACTTGTGTTACATCATTACTGGCTCAGTTCAATCATCCTCATTTACACGAGTATCTACTAGACCCCCATCTACAGTTAACAGATGGATGCAGATCACTATACAGTACATTAGAACAAGTTGTTAAAGACCTCAATGGTAGAATAGATAGAATACCTAACTTCCAAAAGAGCGTAGTCACGATACGCAAACAATTGATGGGTATAGATATGACAGCACCAGAAACCAACAGTATGGCACACAATAACCTGCTTGAAGCAAGCATTGTTCTGGAGGAATTCTGCAAGGAATTGGCTGCCATTGCCTTCGTCCAAGCTACATCAACCCTCCATCGACAATAA

Transcript

ENSKFPT00000001832

CTTGCTCCAGATTTACCGCCCCAAGAGGACTTCGTGTTTCACTGGAAAGCTGTGACGAATTATTTCATAGAAGCTACAGGTGAGATCGAAGCCCAGTCAAAGGGAACATCATTCTTTTaacaagtgaaaatgtcagaCGAGATGAGAAAGTTCCAGTTCACTCCACTAATATTCCATatcatttggaaaaaatgctgtcAACGTtgaagcaagaagaagaagcagctTCTGGTGGCTCTACAGGCCCTTGTTTGGAATATCTTCTTCAACACAAGATCCTCGATACTCTACACACCTTAGGAAGGGCTGATTGTCCTCCAGGAATGAAGCAAGAAGTGTTATCATTCTTTGCTAATCTGCTGGCCAAGATGAAACAGCCTCTACTGCCACACGTCAATGTCTACAGACCTGTGCATAGATTGATTCGTCTGTGTGGTGAGGTGCGTGCAGCTCCTTCTGAGAATGAGGAAGTTCACTTTCTCTGTACAGTGTGTTCCAAACTGAGACAAGACCCATATCTTGTGAATTTCTTTCTTGAGTTCACCTCTATCAATGCCTGTTCTTGTATTGCCTGTCAACAATCACACAATAAAGACTCTTCTACTAGTAACACATGTACTACTTCTCCTGTTTGTACTAGTAGTTTATCGCAGTCAATAGAGAAAAAAGCTGCAGAATCTGGAAATGGTCAAGATTCATCAATGCTGCAAGACACCAGACGAAGGGACAAGCCTGATTATACATTGGTCAACTCTTTGCTTAGCATGACCAAAAGTGAGgATAGCAGAATAGCAGTCAAGGCTTGTGAAGGACTTCTGTTGTGTGCATCTTTACCTGAGGACCATGCTGCCACTGTTATCATCCTCTATACACCATTCTGTGAGATTATGGCCGATAGATTAAATCCCTTGTTCCAAGCTCTTCCACAGTCCATGGATCCTACGGACATAacaaatgcatctgcaaaGTGGGGCCTTGATCacattgataatgatgaagacaTATCAATCTTTCCTGGCAAAAGGCAGCTGATATCATTTTTGTCCTGGTTTGATTACATTGATCAACTGGCCAAGAATTCTCACAAGTTAGTTGCCAAGGCCCTTGCTGTCAGTGTAAGGGAGAGGTTCCTTCAGCCTCTTGTTGAACCACGTTTCATGCAGCAGTCAGAGCCTGGAATCATTACAACCACAGCTTTAATGAGGAGATGTTTCAAATCTATTACTTCCAATCACCTGTTGACAGAGTTTTCCATATTTCTTCTTGGTGAAAGTACTATTCCTGAGACACAATCTCCAGCTTTGGATGGTCACAAGCTTCGCCAAAAACTGATTGAACGATGTGATCATATCAGTGATGAGTTGAGCATAGAAACACTGAAGCTATTTGAAACTCTGCTCCTCAAACCAGCCCAAATAATCCTTGACAACTTAGTGCTCCGTAACCTGACCAGCAGAAGGTATTCTAGTACGCCTGGTCTAGTAAATGGTGATATGACCAACAATACACCCCCCTCACCTAAGACACCAATATTGCCTCCTCTGACCCCTGATGGGAGGACATCACCTACATTAATAACAAGTGCAGGAGATTCAGAGAGGGAAGCAGTAGTCAAAACTGTAAACAGTTTCTTATCTCTTGTACCTGAACAAGTCAAGTCTTCAGCATTAACGGGAGACATTGGTTATGATACATACCTAAGAGATGCACATAAACAGTTCCGTGACCGTGCTTTACAGTGCTGTCAGTTCCAGTGGCCAGCGTCAGCTTCACCAACAAATGATGAAGATGCAAGAGAGGCTTTTTATGAAGGAGCTTTTTTAAATATGTTGTTTAAAAAACTCCAAAGATTGCTTGATCAAACTTATGAAATGAACCTGCAAGTCACTTGTGTTACATCATTACTGGCTCAGTTCAATCATCCTCATTTACACGAGTATCTACTAGACCCCCATCTACAGTTAACAGATGGATGCAGATCACTATACAGTACATTAGAACAAGTTGTTAAAGACCTCAATGGTAGAATAGATAGAATACCTAACTTCCAAAAGAGCGTAGTCACGATACGCAAACAATTGATGGGTATAGATATGACAGCACCAGAAACCAACAGTATGGCACACAATAACCTGCTTGAAGCAAGCATTGTTCTGGAGGAATTCTGCAAGGAATTGGCTGCCATTGCCTTCGTCCAAGCTACATCAACCCTCCATCGACAATAACCAATACAAGGACCAATGCAAAGATATTGACATTTATTTCAACATTTGGAAGCTGCAACCTTGTTATAATTGCTGGAAACACCTTTAATTTAGGATTGCTGTAATGGAATTTCATGGACTATTTTGATTGTTACGGGAACAATCATCATtacaacaaaacatttttttaaatatcgaATATTAGTTCTTTCTAAACataaaagaacaaagacaTTTATTATATCAAGAagaatgaaatgggaaaacttgtTATAATAGTGGACCAAAACCTGGTCATTTATGACTAAAGTAATACAGTAAAATCATAATTCAAAGAGAAATTTAAAGGCTGTTCTGCTCTTGTATATCACTGCCAATAAATGAGCTGACTAAACTTGCTCTGGTTTTAATCATAGTATTGGTCGACCCAAACATGTGCGTGTCATGACTGGAGATCTAGAAGGAGACATATTTATTGGACCAAAAGCCAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CDM8	FHF complex subunit HOOK interacting protein 2A OS=Mus musculus OX=10090 GN=Fhip2a PE=1 SV=2
A0JNG7	FHF complex subunit HOOK interacting protein 2A OS=Bos taurus OX=9913 GN=FHIP2A PE=2 SV=1
A0JPG1	FHF complex subunit HOOK interacting protein 2A OS=Xenopus laevis OX=8355 GN=fhip2a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003413 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19311 all species →	KELAA	KELAA motif	Motif	Interproscan
PF10257 all species →	RAI16-like	Retinoic acid induced 16-like protein	Repeat	Interproscan
PF19314 all species →	DUF5917	Family of unknown function (DUF5917)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045668 all species →	Conserved_site	FHF complex subunit HOOK-interacting protein, KELAA motif	Interproscan
IPR019384 all species →	Family	FHF complex subunit HOOK interacting protein	Interproscan
IPR045669 all species →	Domain	FHF complex subunit HOOK-interacting protein, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21705 all species →	RAI16 PROTEIN-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was recorded for ENSKFPP00000001680.1 in Condylactis gigantea.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26421	FHIP2, FAM160B; FHF complex subunit HOOK interacting protein 2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.