Gene detail

Detailed information of ENSKFPP00000005098.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031565632.1, ras-related GTP-binding protein C-like [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

Transcript

ENSKFPT00000005435

CAcgatttcttcatattttcatCACATGAAGAATTTTCAACGCAAAAAGTCACAGTTTTCAGCCACGAAATGACGTCTTACGAAGAAGACGAAAATTTTGGGAGCTACAGTGTTGTAGGTTCGTTTCCAAAAGATTTTGGATATGGGCCTGATGAAACAGAAGAAATCACAGGCAATGAGAACAAACCAAGAATCCTTCTGATGGGTCTCAGAAGGAGTGGTAAATCATCAATTCAGAAGGTTGTCTTCCATAAGATGTCACCAAATGAGACCCTCTTCCTGGAAAGTACAAGCAAAATCATTAAAGATGATATTTCAAACAGCTCTTTTGTCCAGTTCCAGATCTGGGATTTCCCAGGGCAGATTGACTTCTTTGATCCAGCCTTTGATTCTGAGGTAATCTTTGGAAACTGTGGAGCTCTGGTATTTGTCATCGATGCTCAGGATGACTACATGGAGGCACTGGCAAAACTACACATGACTGTTTCAAGGGCATACAAGGTTAATCCAAATATCAAATTTGAAGTGTTCATCCATAAAGTAGATGGTTTATCAGATGACCATAAAATAGAAACACAAAGGGACATACATCAAAGAGCTACAGATGAACTAACAGATGCTGGTCTTGAAGGGCTTCGATTAAGTTTCTACCTCACTAGTATTTATGATCATTCAATTTTCGAGGCATTTAGCAAAGTTGTACAGAAGCTTGTACCACAGTTGCCAACCTTGGAAAATCTTCTTAACATTCTTATAATGAACTCGGGCATCGAAAaagcttttctttttgatgtaGTCAGCAAAATCTATGTAGCTACTGATAGTTCTCCTGTAGATATGCAGTCGTATGAGTTATGTTGTGATATGATAGACGTGGTCATCGACATCTCCTGTATTTATGGtttacGCGAGGACGGTGATGGCAGCGCTTATGATATCGAAACATCGTCAATAATCAAGCTAAATAATAACACCATACTTTACTTACGCGAAGTAAATAGGTTTCTTGCTCTAGTGTGTATACTTCGAGAAGACAATTTCGCCAAGAAAGGTCTCATTGACTATAACTTCCATTGCTTTCGCCAAGCTATTTCAGAGgTATTTGAAGTACGAAAACAATTGAGAACCGCGTCCGACAGTGCTTATTCCCATCCCTCGCAATCAAATGGCAGCGTGCCTGCGGGGATTGGACATGGGAGAGGAGACACCGCTGTCGTAGTGTAGCGCAGGCGCAAAATGGTGATTAAATTTTCAAAGGGTTGATTTTAAAAACCTTATTCAGTGTATTCATAATAGAATTTGAAAGACTAAGTTTACAATATTTGTGAACTACTCTAATGTGGCCAAGAGAACCGGAGCTGCCATGTTAATGATGGAAGAATGATTATCCAAGGATATCTGATGATGGGGTCTCAAGAATTGCCCTGACCGCCGTCCAAAGTTCATGGTATTTTTATTACTGTGATCATGATCTCGATCTATCATTCGACGGAGTGGCTCTGAAAAGCAATCTTGGCAATTCTCCTGTGCCTGCCAGTCATCTGGCTTTGTGCTCTAAACCAGACATGACCGTTATCCTTATGCCGAGCCCCTGGCAGACGAACCTACAGGGCAAAGATGGCGAGATGATTCCCATAGTTCTATCAGAAGAGGACAAACAGCTGTGTGCTAATCAACAAGATGTAGAATTAACGTGGATAACACAGCTAATAGAGTATGCCAAGTTTAACAAATTATTTCTTGAATGATCATGAAAGTCATTGGTCATCTTATTTACTTCAGTACTAGCTCCACTTACGTCTAAGCTACCTTCCCACCTTGCCTACCAAACCATCAACATATCTACCTACCCACTACcaacctatctacctacccaCTACcaacctatctacctacccaCTACCAACCTGCCTACCTACCCACTACCAACCTGCCTACTTACCCAACCACcaacctatctacctacccaCTACCAACCTGCCTACTTACCCAACCACcaacctatctacctacccaCTACCAACCTGCCTACTTACCCAACCACcaacctatctacctacccaCTACCAACCTGCCTACTTACCCAACCACcaacctatctacctacccaACCACCAACCCACCTACTTACCCAACCACcaacctatctacctacccaCTACCAACCTGCCTACTTACCCAACCACCAACCTAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99K70	Ras-related GTP-binding protein C OS=Mus musculus OX=10090 GN=Rragc PE=1 SV=1
Q9HB90	Ras-related GTP-binding protein C OS=Homo sapiens OX=9606 GN=RRAGC PE=1 SV=1
Q9NQL2	Ras-related GTP-binding protein D OS=Homo sapiens OX=9606 GN=RRAGD PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005111 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04670 all species →	Gtr1_RagA	Gtr1/RagA G protein conserved region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006762 all species →	Family	Gtr1/RagA G protein	Interproscan
IPR039400 all species →	Family	RagC/D	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11259 all species →	RAS-RELATED GTP BINDING RAG/GTR YEAST	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0009267 all species →	Biological Process	cellular response to starvation	Interproscan
GO:0010507 all species →	Biological Process	negative regulation of autophagy	Interproscan
GO:1990131 all species →	Cellular Component	Gtr1-Gtr2 GTPase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16186	RRAGC_D; Ras-related GTP-binding protein C/D	-	Shigellosis	ko05131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.