Gene detail

Detailed information of ENSKFPP00000005577.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031570425.1, DNA mismatch repair protein Mlh1-like [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

Transcript

ENSKFPT00000005962

TAAATCATCGTCTTGTGGACTCCACTGCGCTGCGCAAGGCCCTGGAGACCATCTATGAGGCGTATCTCCCAAAAGGAACACACCCATTTATATACATGAGCCTAGAGATAGCCCCTTATAATGTTGACGTCAATGTTCATCCTACGAAACATGAGGTACACTTCCTACATGAGGAGGCTATTATTGAAGCAGTGCAGAAGGCTGTTGAAGAAAAGCTTTTAGGGTCAAACAGTTCACGTACATATTACACACAAGCGTTATTACCTGGCGTGCCAGAGCCAGTTGAAAATGTGACCAAAGACAAATCAGCTAACACCAGTACAAAACTGTATGCACATCAGATGGTTCATACTGATTGCAGGGAGCAGACCCTCCATGCATTTGTTCCTCCCAAAGACAAAAGCAGTGCTTGTGAACAAACAACAGCTACCAGTGCTCAGAGTGGTAGCATAGAGATGATAGATGTGGACATGGAAGACAGCAGTCACAGTGAAGCTTGTTTTGTGGAACCTCAAGATAATCAAGACATGATTCCAGCAGgaaacaagaaagcaaagataGACGGTAATGGAACTAGCATCATGAAAGCCAAAAAGAAACAGCAATACAGAGACATCCAGCTTATTAGCATTCAGAATTTAAGGAAGACAATCGACAAGGCTGAACATGAAGGACTTAAAGACTTATTTGAAGGGCACAAATTTGTCGGTTGTGTTAATCCCTCCCATGTGCTCCTCCAACACAACACTAAACTATATCTTTCAAATATCTTCACTCTTAGCAAAGAGCTGTTTTATCAGATTGCAGTGTTCAGATTTGGAGATTTTGGATTTCTCAAACTATCTGAAGTTGCACCAATATATGAGTTGGCAATACTCGCCTTGGACAGTGAGGAAAGTGGATGGACAGCAGATGATGGACCAAAGGAAGATCTTGCAAATTATATCAAAGATTTCCTTAAGAAGAAGGCTGAAATGCTGTTGGattatttttccattgaaGTAGATTCTGATGGCAATCTTTGTGCACTGCCATTGTTACTGGATAACTATATTCCTAACCTGTATGGTCTGCCTATGTTCATTCTAAGAATATCTACTGAAGTCGAATGGGACAgtgagcaggagtgttttgaAACACTAAGCAGGGAAATCAGTAGATTTTATGCCTTCAAGCCAGAACTGTCATCCCCAAGCAATCAAAAAACAACTCCTGATGAGAATCCAGGTAGCAGTGAAGATACAGACAGCAGCAGTACCTCATGGCAGTGGACTGTGGAACATGTCCTCTCACCAGCCTTACGCACAGGTCTGGTTCCACCTGCTAGATTTGCTGAAGATGGCACTTTGTTACAGATAGCAAATCTAACTGAACTGTACAAAGTATTTGAAAGGTGTTAAAGATGATTTACAACAGTTATTCTAAGAATAAATGTAATGCATTTCAACTACCTTCCATGTTGTAAATAACCTGTTAGAATATATGTTTTGATGAAACATTCTTGTGTTCCAAAGCTATGGTGTTCAATGGTAGTGGAGGTGATGAGGCATGATCAGGACAGGCATGGATAATGGAAATATTATAATGATAGTTGAaattgaagatgatgatgatgatgatgatgatgatgaagatgaagaggtCAGATGAGGGAGGATGCAGCTGATATTGATAAAACAACGAGTTAGAAATTTTCTTTCctaaattattttcttaatataAAAGAAGTGGTCTGCATTGTTTTAGAATGttagaataaagaaagaaatgtaaTATGCATGCGTGATTGCAGGTTTTTTGTGACAGGTTTTCTAATGGGTGATTTGACAGTGATATGCTTACCTCCCACCACAGAAATCTGAGTGCATGACGGCTAAGTGTCATGTGACTTTTGGccattcgccagttgcaaaacgtgCGAGAGCTTGGGCTGAATTATGACCACAAAACATGCATGGactgtttggctggacagactgatcaagaaatggtgtcttaaaaataatgttatttttactgaaaatgatatccctggagccaaaatacctcgtgaatctttagaacatccAAGAATATGGCAggtgtgtccagccaaacaatcca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P40692	DNA mismatch repair protein Mlh1 OS=Homo sapiens OX=9606 GN=MLH1 PE=1 SV=1
Q9JK91	DNA mismatch repair protein Mlh1 OS=Mus musculus OX=10090 GN=Mlh1 PE=1 SV=2
P97679	DNA mismatch repair protein Mlh1 OS=Rattus norvegicus OX=10116 GN=Mlh1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005246 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16413 all species →	Mlh1_C	DNA mismatch repair protein Mlh1 C-terminus	Domain	Interproscan
PF01119 all species →	DNA_mis_repair	DNA mismatch repair protein, C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038973 all species →	Family	DNA mismatch repair protein MutL/Mlh/Pms-like	Interproscan
IPR032189 all species →	Domain	DNA mismatch repair protein Mlh1, C-terminal	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR013507 all species →	Domain	DNA mismatch repair protein, S5 domain 2-like	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10073 all species →	DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0032300 all species →	Cellular Component	mismatch repair complex	Interproscan
GO:0032389 all species →	Cellular Component	MutLalpha complex	Interproscan
GO:0140664 all species →	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0030983 all species →	Molecular Function	mismatched DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000005577.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.