Gene detail

Detailed information of ENSKFPP00000008461.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031558503.1, ribonuclease 3-like [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Sequence

CDS

ENSKFPT00000009216

ATGTGGAATTCTCCTTTGAGGTTTCCAACAACTTGGCAAAGTCCTCAGTTTTCTCAGGTAAATCAGAATATAGGCACTGCTGTTAACCAACAATCTCTAGGACTAAATCAGCAAGGACTAGCAAATAGACCTCCAGCTATCCCACAACCCCATGGGGTCTACAGTAACTTGAACCCAAATAATGTGGTTATGGTACAACAGCATCCTGGGTATCAACCAACCAATGGAGGAGCCATGTTACAAAATGGGCCTTTTGTCAGACAACCATTGCACCCAGTACAAAACAATTTACCAGTAATGCAACCTAGTGGTGTTCCTATGAACCCCCAGTTCCCCAGAAATCCCATGCATGTAAACCCAATGATGGCACCCAGAGGTGTAGAAAGACAGCATCCACCATTTTTACCCCATCATCCTGGTAATCCTCCATTACCTAGGATTCCAGTGGGGATAGATCAGTCAATACCAATGGGGCCTTCTGTGCCTAACCCACCAATGATGCATACCCTACCTCCTAATATGCATCATGTTCCTATGAATATCAACTCAGTGGTGCCAAGAGCTGGAGATCCACTGCCTCCAGGAACATCCAACAACAATCCACCATTTGCTACTCCAACCATCATTGAACCAACACAAACTGCAAGGAACATTGTTCATACTCATTCTCCTGTTGATCCAATACATATGAACCATCAAAGTAATCAAAGTATGTGTACCAGTAACTTCCTGCTAGAAACACCAACTATCCTAGGTCAAAGTAGAAATGAAAGTGGCAATACTTTTACAACTGATCACCCCAGAGATCCACAAAGAATAAGAGATACTTCAGTAGATCATGATCGGATGGACATTATTGAATATAAGTATGGCTTAGCACCACCAGAAATGGATTCCATGGCATTTATGGATGCTGAAGACGAAGTGTTTTCCAGGACAGATGAAAGAGAAACGCTAAGAAATCATTCTAGCAAACCTTCACCTCACAAGAATCTGGAGGAGGGATCTCACCTCACAAATGATcacaggaagaaagaagaccATGTGATTTCAAGGAAGAGAGAGTCTGAGAAGCATCACAGTTTTTCTCAGCTCAGtcaaaaacaaccaaaatatGACAATGATTCAAAGCACGTTAATCATGATAAAGGTTATAATAGATCTCATGATGGAAAGAAAAGTACCCTGTCAAGTGAAAAGAAGAGCAGGTCAAGATCTAAACATGGTGATGATAAAAAGAATTGCAGTCCACATAATGGACACAGAAGTAGTACAACTAGTGATGGAGAAAGGAGGAAAAGTTCCAAGCAGGTCTGTGATGTTAAGGGTGAACGGCCAAAAGAAAGCACTTCAAGTGAAGGGAGAAGCAGTACAAGCTCTAGATGTGTTGATCATGACAAGGGTTCTAGTTCCCATGATGGAAAGAAGGGTAGTATGGGGAGCAGAGAGAGGAACAGGGCAAGCTCTAGTAGCTCAAACCATAGTCATAACAGCAAAATTATTAATAGCAACAGAAGAAAAGATTCTTTTACCGGCCCAAACAGTCATGATAGGCATCGGCACGATAAAAGACCTCACCCTGAAGGCAGACCACTACGCTGTGTATCGCCACCAGCACCAGACATTAAAAGAGTATTGAAATTTATAGTACCAGAAGAGTATTATACACTGTCTAAAAGCAAAAAGGATTCCAAGTCAGTGACTTTTGGTACTCAGAAGCTTGAAGAACTTTATGAAACCTTTGATAAGAAGATATTAAACCCTGCCAGTGAGCCTGATAGTGGAGATGAGGCTTTGAATTCAAAGGAAGTGTCTCTCAAGGATAGCAATGACAAGGACAAAATGAATGAGGATGAAGATATCTACAGTGACTTTGATTCTTTAGATGACTTTGACTTGAGAGAACAAGAACGCAGTGGCAACTACTCTGCTGATACGTTTGCTGATGCAAATGACTCTGATGagagtggtgatgatgatgatgaaaagtatgatgttgatgatgatgcaagTGATAGCAGTGGTGATGAATGTGCAGGTGGTACTACTGGGATGACAGCTGAAGAGGTTAGAGCTAGGAAGCTTTCTGACCCTAGAAGGCTCCATCCAGATCTTTGGTTCAATGAAAAAGGAGAGGGGAATGATGGCCCAGTTTGTAGATGTTGTGCCAAAGATAGGGAACATGGAATACAACATTTTGTGTATCCAGAAGAAAAGaaTATACCATTATGTGATCCCCTTGGtaacaatgctgatagattatACCACTACTGGGTAACTGTTACTCCTCATACCAACTTTATGACTGAAAGACCAACAACAATAAAATACCATGACAGACAGTATGTGTTTGAAGGATTCTCCATTCTGTCACACCATTCTCTAGATAAGatTCCTATTTGTTCACTCATTCGTTTCAATATTGAGTTTTCCATACATCTCATTCGGGAACCCATTCCAATGAACTTTTGTATTAAAGGATTAGAAATGATTTCAAAGTTCCTGTTTTCTGATGTGCTTGAGTTGTTAGACTGGTCATTGAAAGGACCAgatggagaaagagaaagttgTCCAATCTTTCATTTCTTGCCAAGATTTGTTTACAGAAAACAAGAATCTCAGAATGGAAAAGAAGTTCATGAGCTACTACCAATAAATAAAGTCATTTCTTACTTCTTAGAGAGTTCTCAACCACTTGTAAAGcctGAGCAACTTAACATGTCAAAGCAGAAGGAGAGAAGTTTGTCAAAATCATGCCGTAACCAAATTGTTAAGAGACCAAATAAGAAACCAGCTGCTTTCCGTATTGATGATCTGGagtttgaagaagaagagcacaCTGATGGCCAAAGGACATATCCATTAGCCATTCATCATGGTATCCGTCCAGTCCAGATGTCCTATGCAGGGAATGCAAAGTATCAGAAATTGTGGAAATCTTTCTTGAGGTTACGGAACACTGCAGCCAATCGgccTGTTTTGAATAGGAAATATCACGACAGACTTGTTGAGATGAAGGTTTGTCACCTATTCACTGTCTTTCTTTCAATGCGCAGAGATGTGGAAGTTAAAGTGAACAGCCAAGGGCTGATGAAAACTGGCATTCACTCAGACATCTGCCAGCATTGTATGTTGTTGCCAGTTTTGGTACATCATCTGAGATACCACATCAGTCTGAGGACACTAGATGACAAACTTGGCTACAGGTTCAAGGATCGCATGCTTCTACAGctttCACTTTCCCATCCATCATATCATTTGAATTTTGGTATGAACCCTGACCAAGCCAGAAACACCCTCAGTAACTGTGGCGTAAATCAACCCAGATATGGTGACAGAAGAATACACAGAATACACACAAAGAAGAAAGGTATCACCCAGCTGATAAGAGTCATGGCAAACCTTGGCAAGATAGAGGAATACCATTCAATGATTCGACACAATGAACGGTTGGAGTTCCTGGGAGATGCTGTTCTGGAATTTATTTGCAGttCTCATTTGTACTCCATGCTGCCTGACATAACAGAGGGTCATCTAGCGACCTTCAGATCAGCCTTGGTACAGAACAGCCATCTTGCTCTCCTGGCAAAGAAACTAAACTTGTCTGACTACATGCAGTATGCTCACGGACCAGACTTGTGTAAAGAAGAGGACATGAACCATGCCATGGCCAATTGCTTTGAAGCTCTCCTTGGTAAGACACTACAGTCTCCTTACCCCTCTCACAGGGAGTGCTTATTACTCTCTTTCATTCCAGGTGCAATATTCTTAGAAAGTGGTTTACAAACAGCAGTAGATTTCCTGAGCCGTGTGACCTTCGAAGACGAGGAATTACGGAATGTTTGGGTGGATATGCCGCAACATCCTCTACAGTCGCAGCAGCCACAAGGTGACAGACATCTCATTCCATCCTCGCCTGTGCTTCAGAAGTTACAAGAGCTGGAAGAGAAGATAGGCATCACCTTCAATCATATCCGCCTGCTGGCTAGAGCATTCACCCACCCACAAGTGGGATTCAACAACTTAACACTAGGTGATAATCAGCGCATGGAGTTCCTAGGGGATTCTGTTCTACAGTTCGTGGTCTCCGTCTATCTGTACAAACATTTTCCAGAGCATCACGAGGGACATTTAACGctTCTTCGCAGTTCTCTCGTAAATAACCGTATGCAAGCTGACATCGCCAGGCAGTTGGGACTCGACGAGTACATCAACTTTGGTTCATCGGTAATGCTTGCTCTTAATTATAcGTTCCTGGCAGCTTTGTACATCGACAAAGGACTAAAGCACGTAGAAGCGTTCTGTCGAGTGTGTTTCTTCCCTCGTGTAGAGGAGAACATTGTGGATCAAAACTGGATTGACGCTAAGTCCCAGCTGCAACAGTGTTGTCTGACTCTGAGAGAAGAAGGAAAGACTCCTGATCTACCAGAATACAGGATCCTTCAGAATGCTGGGCCTGCGCACCGCAAGAGATATCAAAttgTTGTCTACTACAAGGGCAAACGGTGTGGCAAAGGCGAAGGTCAGAGTATCCACCAGGCAGAGATGGCGGCAGCTGAGGATGCCTTATCGTCTAGTTATTTTCCAGAACTTGCACGACAGAAACATTATCTGGACAAGAAGCACCAGAACAAACGaacgaaacaaaacaatcGATCACCTACCCGACCGAGAGACACGACACTCGAAGACCCGCCTGTACAGGAGCCACTGTGGGTGGAAAACGAGTGA

Transcript

ENSKFPT00000009216

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NRR4	Ribonuclease 3 OS=Homo sapiens OX=9606 GN=DROSHA PE=1 SV=2
Q5HZJ0	Ribonuclease 3 OS=Mus musculus OX=10090 GN=Drosha PE=1 SV=1
O01326	Ribonuclease 3 OS=Caenorhabditis elegans OX=6239 GN=drsh-1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002885 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00035 all species →	dsrm	Double-stranded RNA binding motif	Domain	Interproscan
PF00636 all species →	Ribonuclease_3	Ribonuclease III domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000999 all species →	Domain	Ribonuclease III domain	Interproscan
IPR014720 all species →	Domain	Double-stranded RNA-binding domain	Interproscan
IPR036389 all species →	Homologous_superfamily	Ribonuclease III, endonuclease domain superfamily	Interproscan
IPR044442 all species →	Domain	RNase III, double-stranded RNA binding domain, animal	Interproscan
IPR011907 all species →	Family	Ribonuclease III	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11207 all species →	RIBONUCLEASE III	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004525 all species →	Molecular Function	ribonuclease III activity	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0031054 all species →	Biological Process	pre-miRNA processing	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031053 all species →	Biological Process	primary miRNA processing	Interproscan
GO:0070877 all species →	Cellular Component	microprocessor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000008461.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.