Gene detail

Detailed information of ENSKFPP00000008535.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_031561824.1, uncharacterized protein LOC116297689 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKFPT00000009297

ATGTCATGGACGTATCCATACTCGCTGCAGCTCGCTGCTCGTATTGTTGGCGTTATTCTCTTGTCTTTTGTATCATTTGGAATTTCAGCAGGAAGACTGGACATCTTTGTTGTACTGACCAGTAATGAAGGaaaggaatatttgctttcacCCATAAATGATTCCTGCTATGGAGACTGGCTGACTAACTTGAAGAACAAAATCAATGCAAGCAAATCTGCATCGCCCTTTGAGCGTGGCAGTCCAGGACAAGGAGGATTCATGAGTCGGGTTCGTAATAgtttgagaagaaaaaagaaacttggTCGTTCAATTTCCGAAGATGTTACAGGTCAAATGGGATCTTCACAGATTAAGAAAGAGAAAGCCATTGCCCATTCATTTACTCcagaaagaaaacacaaaGCCCATGAAAGTATCCTAAATAAATATAGAAAAGAAAGGTCACACAGTTATCCCAGTGAATCCGAGGATGAAAAGGTGAAGGACAGAATGGAAACAATTCCTAAGGTGAAAACATATGCAGACAAAGCCTGTGATACATCATGTCTAGTGTCTCTAGACTGGATGATCACTGATGGGAGTGAGGATTCTGCTGACAGTGACAAACCAGCAAATGCAAGACAGTCAAGGCACAAACCAAGAAAATTACTCAAAGCAGTGGGAATAGATTATAATTTGCAGGGGCAGACAAAAAGTAATCAAAAGGGAGTGACTATCTGTGTCAATCAAAGCCTAGGTCGAGGTAGTGACAGTAAGATAAACAGTATGGAGGGACAGACTGACAGTAATGAAAAGGGATTAACTGTACCTGTCAATCGATGTCTAATTGATTTGATTGATGGACAGACAGATGTAGAAGATGtctcacttgtcaatcaagGACAGACAGATGTGGAAGATGtctcacttgtcaatcaaggacagacagacattgGAGATatctcacttgtcaatcaagAACAGACAGATGTGGAAGATGtctcacttgtcaatcaaggacagacagacattgGAGATatctcacttgtcaatcaaggacagacagacatggGAGATGtctcacttgtcaatcaagATCTTCATGGACAGAAAGACAGTGGTGAAGTGGAAGGTTTCTTTGCTGACAATCaaattattaatgaaaagaCAGACACTATTCAAGAAACTGTAGCTGTCAATCCAAGTATTACAAAACAGACAGATTTCATTAAAACTGTCAGTAAAAGTATTCCAGGGCAGACAGACACTACTCAAAGAGAGATACCATCTTCTAGATACAGTAAATCAAGACCAGAGACTGAGAAAACGGATGGGAAACCAGCAGTTCTTGCTGAGAGGCCGCAAGCAAGCACATTTTATTCCGATAAGTTGTGGATCAATAATGTGGATGTTGACGTCATGGAAGGCATGTCTTTGCAGCAGCAAAAAATAATTCGTGAACTCGAGATAGAAGTCTGTAAACTAAAGTGTGAAGTTATTAGTCTTATCCAAGGAACCATCAAAGTGCCTCTCAAAGATGATGACCTCGCAGATTGGCACTACGTGGAGGAAATTCGGTACAAGGATCGTATCTTTGAGCTCCTGAGAGAAGCAAGACTGTGCAACCCCAGCCTACCAGACCTTGATAGttcCAAATCTAGTAACTTCAAAGATGCGTATGGTTTTATTCACGGCAGTCGTGAGAGTGAAAGTGTGGTCTTCCATTTCGTCTGTCGAGAACTAACTCAACACTATTCCAGCTTCTTCCGGGGGGTGAATTTTTATAAGAACCAAGCTAGAAAAACTGGAAACAAACTCAAGTCAGAAATGAGTGAAGTTGAGAGGCAGATTAGATGTGATCTGCTGCGCACCATGCCGAATAATGAGAATTTTAAGACTCTCGAATCAGAAGGGgttACCCAGTTATCGCGTATTTTACACGTTTTCGCCGATCTCAGACCTGACATCGGATACCTTCAATCAAGTGTATCTCTTTGTATTTTCAGGTCGCTTTACGCTGTAGTTGATGTTTACCTTAAGAATTATTTTGATAGGATGTTGAGTGGAGTTCAAGCTGACCAGgAAGTCTTAAAAGAGCTGATCGCAGAGAAACTGCCTGTTCTCAACAGTCATCTCAAGTCCTATGGCGTAGATGTCTCCACTGTGACTTTTAATTGGTTTATCACTGTTTACCTTGATGCTGTACCTTTCGAGACTGCCGTTCGTATATGGGATAGTTTTCTGTTCGAAGGACGAGAGGTGTTGTTTCGTATCGCTATTGGTCTACTGAAGCTACAAGAGCGCTCATTACTCCAGTTGTCTGGACACTTGGAGATCATGCAGTACATGAAAAGAGCTGCTAGGGTCATGTATGACGTCGATAGGTTATTCAAGgcatcatTCGAGGAGATGACAAAGTTTCCTACTAACGAAATGCTGGATGAAAGACAGAAGCAGCATCGCATAGAGTTCAAATCCATGTTGGATCACGTGTCTCCCATCAAACGTGAAACCAGCAGAGCGCGAGTAAGTTCATTTATCGTGGAGCTCCCAAGCCAAGACAAGGTGGACCGGCTGGATCAATACCAGTTGGTTGAATGTGCTGTAACAACCAGTAAAGATCTTTCAGGTCCCGTGTGCATTCCATGTAGTGTACGTGGGGATGCTAAAGTTTATCTCTTGGATATTAACAAAAAGGAGTTGAGTACCTTAAACTCTCATATCAATTCTCGTATACTCTGTGCTGACGTATTGGGGGACGGCACCGTTTTGATTGGCACGATATTCTGGTGTGTGTATGCCTTTGATATCGAATCTAGAACGGAGTTGTGGAGTGTTCCTCTGAGAGATTCTGTCATCGATTTGTGTCACTATGATCACGAGACTGATGACAAAGTGTATGCTGCGTTAGCTGATGGGTGCATAGCTGTTCTACCGaatgCGAATGCTTCGGGTCCCCCGTCTCAAGGATCGCGTGTTCCTATTGGTTCAGCTCCTGTGATGTGCGTGACAATGGTTGATGATAAAGTCTGGTGTGGATGCGGCAGTAATGTGGTAGTGCTTGATGCAAGTTCCCTAGAAGAACTTCATGCCACGGTGGTATCGTCTTCACCTCGTCACCAGGTCGCTCGTCTACTCGAGGGGAATCATGGGGTATGGTGCACTATACGAGGGTCATCGTTGGTAATGCTGATAGACCAGAATTCCTTCGAGTTACTGCTGAAAATCGATGTTGCTCTTGACACGACGATTATAGATGCTGTCAGCGAATCGCAAGTCACCGTATCTCCATTCCAAGAATCCCGCGTCACGACCGTCATGCCGTTCGCTAATGAATTATGGTTAGGATTGGGTAATGGCCAAGTGCTGATTTTCGATGTAATTGAGAATGATACGTTAAGCGAGGACGAGAACTGGCTAGAGAGCAGTGATACACACGATCAAGACACACCACCTGTTTATTCACTTAATTTTTCCGCGATTTTCTCCAGCGAGttcaagttttctttgaagatgaGAGTACAGTACCGAGTGAGCGAAGAACCCATACGATCTCTGGAGGTTTTGAGAGAAACTGATGACCCGGTGGTCCTGAGCTGCGCCAGCACGCTAAGCCCAGAAGGAGGTCTCTCCATTTGGCAAAAACAAGCAACTCAAGAGGATCTGTATGAATGGATGAATTATCCTATAAAACATTCTCAGGCTGCAGATGATAGAGTCTTCCGAGGATAA

Transcript

ENSKFPT00000009297

Protein

Uniprot

Uniprot term	Description
B1AVH7	TBC1 domain family member 2A OS=Mus musculus OX=10090 GN=Tbc1d2 PE=2 SV=1
B5DFA1	TBC1 domain family member 2A OS=Rattus norvegicus OX=10116 GN=Tbc1d2 PE=2 SV=1
A6QP29	TBC1 domain family member 2A OS=Bos taurus OX=9913 GN=TBC1D2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00566	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan
PF19056	WD40_2	WD40 repeated domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000195	Domain	Rab-GAP-TBC domain	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050302	Family	Rab GTPase-activating TBC domain-containing protein	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR035969	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47219	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16727	ARHGEF10; Rho guanine nucleotide exchange factor 10	-	Chromosome and associated proteins	ko03036	deepkoala