Gene detail

Detailed information of ENSKFPP00000010034.1 in Condylactis gigantea

Genomic Location: chr12:3090012...3093401
NR annotation: XP_031557697.1, transcription elongation factor, mitochondrial-like [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSKFPT00000010869

CGAGATGGTTCCAACATGTTTGGGTGCAGGGAAACCATTTATTTCGTTCTAACGCTTTAATAACAGCTAGAATTATTGGATTAAGAAGACGGTTGTGTCATTTGACTGCAGCTGCTGTTCAAGATTCTGGTCTAAAATCAGAGGTAAAGACGAAGCAGAAAGGCAAGGCTAAGAGACAGGAGGTTAATATAACCCTTGATTTGACAGACGAACAGGCTCAGTGGTGGAACGTGGTGCCAATATCGGAGGACCAAACCCATGACAATTCTTGACTTAGCAATACTTCGGGAGGGGGACACATGAATATCCAGAATATTGTATCAATAGACATTGGGCTGCAGAATACCGCATGGATCCACATTGATAGAGAGTGTAATGTACTTGCCTGGCGGCAGGTATTCATATCTAAGCCAAAGCCATATAACCCTGCACTACTGAAACCACAGATTCAGTCTTTCGTTGATTCTTTGCCCAAAACAGATGCATATATCGTAGAAATGCAAAGCCACAGAGTTGGCAAACATGCTGTTGCTCTCCTTCCATTTGTTCTTCACCTTCGCATCATGGAAGCAATGATTCACTGTCTTCTGCCGCCCCCAGTAATTCCCCTGGACCCCCACTACACTTCCAAATACTTTGGCCTTCCTAGTGGGCATGCTCAGAAGAAGAAAGCTGCTGTCAGCTTAGTACAGAGTTTATTCCTTGAACGACAAGAACTTGCTATTGAAGAAGAGTGTGAAAgctatttgaaagaaaaatctgGTTTGGAAGGGAGTGAAGCAATTGTCGAAGGACTGGTTGGTAACCCTGTGTCATCTGAGGAAggggacagacagacaagtcAAGGTGCAGAACTAGTAGTTCCAAATTCAACATGCCCTAATCTCAAACTTCAAATTTCAGCTGAACTTATTGAGTATTTTCAATCATGTAAGAAGAAGGATGACTTGAGTGATTGTCTTTTACAAGCATTggcattttttaatttattgtcAGAAAGTGAAAACTAATCTTGTCTCCTCTGCGTGTCTCAGTTTCCTTTGCATTTTCCAAGATCTAGCAAATGGTGAATGTTCTAAGCATATGCTGACCCAGTGTGAAGCCTCGTTTTTCATGCCAGATTCTCACTGCAAAATGATAGAGTGATAGAAAACTGAAATCTAGACTGGTGCCTGCCAAACCAGTAACAATCTTGTTATCCAGGACCTCTGACACAAAGGAGAGGACCCTGGGAATGAAGATGAAGTTCTGATGAGCTGTAATCTTGTTCAGCCAATACTATTTTAAACTGAGTGCCTTAACTAAtttgccagttgcaaaacgagcagGAGCTTGGGTTGAATTGTGACTGcgaagcatgcatggattgtttggctggacacatccgccatattctacaatgttctaaagattctggaggtattttggctccagggatatcatcttcagcaagaataacattatttgtaagttgatttgtgtttgaagacgccatttcttgatcagtctgtccagccaaacaatccatgcatgctttgcggtcatcattcggcccaagctcccgAAGTCAAGATGCTTTATTTCCTGGAGAGTGTCaaattgtaaaaaataaaaactacaaaatgttgataaataaaatttattggCAATAAATTCATTCAATTATTTTGCTGGCTGTTGAATGACTATTTTCTTTACGTTTTTCACCCTGGAAGCAGAGTCTTCTTCATCTCCTCTTGGGTGTAAAGAGAGACTGCTTGCaggctgtttttttttcatactaCTATTTATAGAACATTTTTCTATTAAATTTTTCCTTAGAATTTAAAGTAACAATAAAAGGTGATATTCATACTTTGCATCTAGTATAAAATACAGTaccattcatttgttcatccAGTTATTCatttaatgaaattaaaaattaacagTTATTCAAAGTTTTGTCTGGTAGATGAAGAAACAAACTCTCATATCATTTTGCTATCTGTCAAAAGGGTAGTTTTTGT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008506 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09159 all species →	Ydc2-catalyt	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR039150 all species →	Family	Transcription elongation factor, mitochondrial	Interproscan
IPR015242 all species →	Domain	Mitochondrial resolvase Ydc2, catalytic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21053 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006390 all species →	Biological Process	mitochondrial transcription	Interproscan
GO:0006392 all species →	Biological Process	transcription elongation by mitochondrial RNA polymerase	Interproscan
GO:0030337 all species →	Molecular Function	DNA polymerase processivity factor activity	Interproscan
GO:0042645 all species →	Cellular Component	mitochondrial nucleoid	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000010034.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.