Gene detail

Detailed information of ENSKFPP00000010643.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031573370.1, ATP-dependent RNA helicase ddx24-like [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

ENSKFPT00000011480

ATGGAGAATAAagccaagaagaaaaagagaaaaaagaaaaaaaagcaaggGGGACAAACTAATGCTGAGAAACCCCAAGGTGGTGATAGTAAACCTGAAATAGTTAAAGGAAAAGACAAGGATACAAGGAATGAAACAcgtgcaacaaagaaaaataaaaagagtaaaGTCGAAATTACGAAAATTGAGGATACGAATCAAGATGGACCACAAgggaacaagaaaaaaacaactgaTAAACCTGAAATACCTGAAGCTAAAGGGAGGACAGTGCATAATATGAGTGAGTGGAATGGCCTAGGTATCCCAGATGATGTGTTGAAGGCATTAAGTGAGCAAGGATTTACAACACCTACTTCCATTCAAGCTCTTGCTATTCCTCCGGCGATATTTCACCATAGAGACATTATTGGTGCAGCTGAAACAGGTTCAGGCAAAACACTAGCATTTGGTATCCCTATCATCCATCATATCATGGCACTGAAAGAACACTCTTCTGCTAACAATACTGACAATAATAATGAAGATGAAACAGAAGATGGAGAAGATGATGCTAACAAGAACCCATTACTGGCGTTGATCATGACTCCAACCAGAGAGTTGGCATTACAGATCAGAGACCACCTCATTGCTGCAGCAAAATACACATCCATTAATGTTGCTACTGTTGTTGGGGGTATGGCTGctcaaaaacaacaaagaatgTTAAAGAAGCATCCAGAAATTGTGGTCGCAACTCCAGGCAGATTATGGGAAATGATTACAATGCAAGAGGACCATGTGAGTCACTTTCAGCAGTTGAGATACTTAGTGATAGATGAAGCTGACAGGATGATAGAACAAGGACACTTTGAAGAATTATCATCTATTCTGGATGCCATACACTACCAAAAAAGTACCAAATCGTTTGATAGTTGTTATCCAGAAGAAGATATGAAAGTTAAAAAAGAAAATCTAAAGACTTCAAAGCTTCAAAAGTTCATTTTTTCTGCGACATTAACAATCCCCAAGTCCATcaggaaaaagggaaaaaattgtgTATTGTCAACAGAAGAATTGCTGGTTCGTTTAATGAATAAGATGAATATGGATCCCAAGAAGGCCAAAATTGTTGATGTTACGACCAAGAAAGGGACGGCACAGACTCTGACTGAAGCTAGACTAACATGCAGCAAGGAAGACAAGgatgcGTACTTGTATTATTTTCTACTGAAATATCCAGGAAGGACTTTAGTCTTCACGAACACCATTGACTGCATCAGACGACTGGCCTCCATACTCAGATTACTCCACCTCAATCCATTACCGTTACATGCCAATATGCAGCAACGACAGCGACTGAAGAACCTTGATAGgtttaaatcTTCAGGAAATGGTTTACTTGTGTCGACGGACGTAGCAGCGCGAGGACTAGACATTCCTAAAGTACAACACGTAATACATTACCAAGTGTCAAAAGACCCAGAGGTTTACATCCATCGCAGTGGTCGTACAGCACGTGCATTAAACGAGGGTCTCAGTGTTGTGCTTGTTGGGCCCGAGGATCTGGTCTCATACAGGAAGATCATGAAAAGCCTCAACAATGGTAATGACCTCGAGTCATTCCCAGTAGAGGCACCTTACCTGGCAGATGTTAAATCCAGGATGTCACTGGCCAGGAACATTGACAAGGAACAAAGCAAGATTCAAAAGAAGAAGTCAAACAATGACTGGTTTGTGGCATCAGCTAAAGCGATGGATATTGAAGTAGATGTGGACTTACTTGAGGATTTAGGAGattctcaagagaaaaaaCTACAGCAAAAGAAGATTGATCAAATGAAAGCATCTTTGTCATCCATGGTCAAGAAGCCTCTTGTACCCAAAGGCTTCAGTGGAAAATTCCCAACGAAAAGTGGCAAGCTGGTGGTCCCAGGATTTCAAGgtGAGTTTTCAAATACAAAGGATCTTCCCAATACAGCAGTAGATGaggtcaagaaaaagaaaaggcgTCGTCGATAG

Transcript

ENSKFPT00000011480

CTGGAAACGAGGAATCCAACAAGAAAAAGGTGACAGAAATGGAGAATAAagccaagaagaaaaagagaaaaaagaaaaaaaagcaaggGGGACAAACTAATGCTGAGAAACCCCAAGGTGGTGATAGTAAACCTGAAATAGTTAAAGGAAAAGACAAGGATACAAGGAATGAAACAcgtgcaacaaagaaaaataaaaagagtaaaGTCGAAATTACGAAAATTGAGGATACGAATCAAGATGGACCACAAgggaacaagaaaaaaacaactgaTAAACCTGAAATACCTGAAGCTAAAGGGAGGACAGTGCATAATATGAGTGAGTGGAATGGCCTAGGTATCCCAGATGATGTGTTGAAGGCATTAAGTGAGCAAGGATTTACAACACCTACTTCCATTCAAGCTCTTGCTATTCCTCCGGCGATATTTCACCATAGAGACATTATTGGTGCAGCTGAAACAGGTTCAGGCAAAACACTAGCATTTGGTATCCCTATCATCCATCATATCATGGCACTGAAAGAACACTCTTCTGCTAACAATACTGACAATAATAATGAAGATGAAACAGAAGATGGAGAAGATGATGCTAACAAGAACCCATTACTGGCGTTGATCATGACTCCAACCAGAGAGTTGGCATTACAGATCAGAGACCACCTCATTGCTGCAGCAAAATACACATCCATTAATGTTGCTACTGTTGTTGGGGGTATGGCTGctcaaaaacaacaaagaatgTTAAAGAAGCATCCAGAAATTGTGGTCGCAACTCCAGGCAGATTATGGGAAATGATTACAATGCAAGAGGACCATGTGAGTCACTTTCAGCAGTTGAGATACTTAGTGATAGATGAAGCTGACAGGATGATAGAACAAGGACACTTTGAAGAATTATCATCTATTCTGGATGCCATACACTACCAAAAAAGTACCAAATCGTTTGATAGTTGTTATCCAGAAGAAGATATGAAAGTTAAAAAAGAAAATCTAAAGACTTCAAAGCTTCAAAAGTTCATTTTTTCTGCGACATTAACAATCCCCAAGTCCATcaggaaaaagggaaaaaattgtgTATTGTCAACAGAAGAATTGCTGGTTCGTTTAATGAATAAGATGAATATGGATCCCAAGAAGGCCAAAATTGTTGATGTTACGACCAAGAAAGGGACGGCACAGACTCTGACTGAAGCTAGACTAACATGCAGCAAGGAAGACAAGgatgcGTACTTGTATTATTTTCTACTGAAATATCCAGGAAGGACTTTAGTCTTCACGAACACCATTGACTGCATCAGACGACTGGCCTCCATACTCAGATTACTCCACCTCAATCCATTACCGTTACATGCCAATATGCAGCAACGACAGCGACTGAAGAACCTTGATAGgtttaaatcTTCAGGAAATGGTTTACTTGTGTCGACGGACGTAGCAGCGCGAGGACTAGACATTCCTAAAGTACAACACGTAATACATTACCAAGTGTCAAAAGACCCAGAGGTTTACATCCATCGCAGTGGTCGTACAGCACGTGCATTAAACGAGGGTCTCAGTGTTGTGCTTGTTGGGCCCGAGGATCTGGTCTCATACAGGAAGATCATGAAAAGCCTCAACAATGGTAATGACCTCGAGTCATTCCCAGTAGAGGCACCTTACCTGGCAGATGTTAAATCCAGGATGTCACTGGCCAGGAACATTGACAAGGAACAAAGCAAGATTCAAAAGAAGAAGTCAAACAATGACTGGTTTGTGGCATCAGCTAAAGCGATGGATATTGAAGTAGATGTGGACTTACTTGAGGATTTAGGAGattctcaagagaaaaaaCTACAGCAAAAGAAGATTGATCAAATGAAAGCATCTTTGTCATCCATGGTCAAGAAGCCTCTTGTACCCAAAGGCTTCAGTGGAAAATTCCCAACGAAAAGTGGCAAGCTGGTGGTCCCAGGATTTCAAGgtGAGTTTTCAAATACAAAGGATCTTCCCAATACAGCAGTAGATGaggtcaagaaaaagaaaaggcgTCGTCGATAGATCATCATAGAAATTTAAAAGGCCACTGCTGACCatcatttttttactcacaCTTTTGAATCTAAACTAAAAGGTTCTAATGTTTGAtttaaaatattgtaaaacaCCCTCTTAAAACCAgtggatggaaatggattgtaaaaggcaATGGGAATCACCTCAAAGTCACTGATTTTCTATTGATGAATAAATCGAGGTATGACTGCAAAGGATCATGGTTGGCTTTGGCTCTTTAAGGAGATAAGAAGAATCATATGAACAGTGGTGCATTTACCTATATTGTACATATATTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0CQ91	ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MAK5 PE=3 SV=1
P0CQ90	ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=MAK5 PE=3 SV=1
Q9ESV0	ATP-dependent RNA helicase DDX24 OS=Mus musculus OX=10090 GN=Ddx24 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003974 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000629 all species →	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR014014 all species →	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24031 all species →	RNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0003724 all species →	Molecular Function	RNA helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000010643.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.