Gene detail

Detailed information of ENSKFPP00000011698.1 in Condylactis gigantea

Genomic Location: chr16:529012...531882
NR annotation: XP_031562703.1, D-arabinitol dehydrogenase 1-like [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSKFPT00000012546

GAAGATTCAGATCAACAAGATCAACGTAAATTTGCTTGATAATACCTGGAAATCCAAGCCATGAATAACGCCGTACAGCTATGGGATGGCCACCTATCTGTCATAACTCGTCCAATGCCTCATGTACAGTCTGCAAATGATGTTATAGTCAAGATCACGTACGCTGCTGTCAGCGGAACAGACCTTGACATCCTTGAGGGCAAACTTGAATGTTCCAGATCAATCATACTTGGACATCAATTTGTCGGGATAGTAAAGGAACTTGGAGCTGATGTTAAACATATATCTGTTGGCGATAGGGTAGTTGTCAATCCATACACAAGTTGCAACATGTGTGACTACTGTCTCAAGGGACAGCCTTTCTTTTGCaaaattgaaggaaaaaatgcaACCATAGGTGTCAGACGCAATGGAGGATGGGCGCAGTTCTGTAGACTGTCAGCCAAGAATGTCATTCCCCTGCCTCATCAAGTTACTTTTGAGCAAGCCCTTTTCGCAGAGCCACTATCATGCGTATTACATGGTTGGGATCTTCTGGGGCCAGTCAAGGCTGATGTTGAAATACTTATATGCGGTGCAGGGAACACTGGTCTTTTATGGgcttcatttcttcatttccgAGGATACAGAGAAATTGTCATCTCGGAGGTATTAAAAGGTCGTCAACGTATTGCACAGCAGTTGGATTTTGGTTACCAAGTTGTTAACCCAGATATCTTAATCTCAGAAGCTAGAAATGCAAAGAATGAACAAGATGATGAATGGGGTTTTGATATCATTATAGATACAACAGGTGACCCTAATTGCTTTCAGCAGAGTTTGAAATGGTTGCGTCATGGAGGCAAGCTTCTCCTACTGGGAGCTTGTTTACCAAGCTCAGAGGTAACATTGAACCCACATGAAATCTACAAAAAGGAGCTGAAAATCTTGACATCGAGTTTTAACCCCTTTAATTTCACCCCAGCCATACAGGTCATTAAGGACATGGGTGTGCGATACCTTGATTTTGAACAATTAGGTGTACGTACTTTTCAACTCCAGGAGTACCTGGCTGCTGTTGAAACCATGCGCAGTGGAGAGATTTCTAAAGCTGTGTTTGAATACTAATTTTTTGAAGCATTTGAAATGGTTGCTTTTTGTATGCAGAATATCATGTCATGATTTCGTTCATCACTAATTAATGACATTTAACTAATTTTGTTTCTTGATTGCCTGTTTAGGATGGAAACGAGGAGTGTTGTACTCTACTATGTGAATGTTTTTGATAACGAACAACTCTCATTTACTCAGTCTTTAATTTTATCTACCGGTAATTACTAAGTATCCAATAATTTATACCTGATGAGATTTTGTGAacattgattttcaaaaatatagagCGGATTttgtatgagtgtgaaacgggccgcgccgtgctgtgaccgtgtcagtgccgtgttctctataaaaacattcggcattcctgccgtaatcgtgccgtgactgtgtggtgccgttttcacagtcatgcgaaatccgctctatttTGATATATTATGGCCATCCTCAATCACACATGCCCTCTCGTAATTTGCTTCTGTCACCATGAGTTAGGTTTTGGTCATTGTTATTCAAAGTGGCTCCATGATATTCCTTAGGCTAATGCCCTTACAGTTTTGTGTTGTCCAACAATATCATTGAAAGGActtgttcattgttttaaaGCAAAACCTCATTGTAACATAAAAAAACACGAGTCATTAAGAACAGCTGTAAAGTTAAATAGAACGTGAAAATATACGAGACATTTTTTTTAAGGATATCACATGACAGTCGAATCACAGGCAACTTTGCCTATCTCTGCTATGTGACATTTTCATAAACTATTGTGGGATCGAAAAACACTCCACAGCATTATGGCCTACCTGATAGTATTTTCAGGCCACAGGACAGAATTCAAGAGCAACTATTATTAgtttacattttatttttcaagatgCAAACCTTTACAGTTAGTTAGATTTAAggataaaattaaataaaatatatacaaTTAATTTTAAGAATCCTTATtaaaaaggtttatttttgAATGTCACTCTTTTAAAAATCTACTACGTTTATATA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6W1W3	L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=tdh PE=3 SV=1
B1KL24	L-threonine 3-dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=tdh PE=3 SV=1
Q15ZU4	L-threonine 3-dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=tdh PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002391 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08240 all species →	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050129 all species →	Family	Zinc-containing alcohol dehydrogenase	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013154 all species →	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43401 all species →	L-THREONINE 3-DEHYDROGENASE	Interproscan

Gene Ontology

No Gene Ontology signature was recorded for ENSKFPP00000011698.1 in Condylactis gigantea.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17818	ARD1; D-arabinitol dehydrogenase (NADP+)	EC:1.1.1.287	Pentose and glucuronate interconversions	ko00040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.