Gene detail

Detailed information of ENSKFPP00000012074.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031565546.1, uncharacterized protein LOC116300760 [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Sequence

CDS

ENSKFPT00000012961

ATGTTAGGACCAAAACATAGGCCTCCCTCTGAGTGGAGGAAACCAATGAATAAGAACTCGAAtcaaaaaggaggaaaggatGAAAGGAAGATAGACGTGGCTAAAGATTTGTCTTCTGTAAGGGTAACAGTTGGGAATAGGCAAGTTAATTACGAGGAACGAATTTTCCCCAATATACATGGGTTGTATGGAATTCACATAAGCAATCTTCCCATGGCATGTACTAAGgaTGAACTGGAGAAAATCTTTAAAGAATATCCCACCCTGAAAGAATGTAAAATTGTTAACAAACAAAAGAATTCCCTGTATGCCTTTGCCAAGTTCACCAGCGAACAACATGCTATAATGGCAATGCAACAAAAGAATGGATATCTGTTCAAAGGTTACaagttaaaaataaacaaagcaaaagagGGTAAAGGCGAAGAAACCCagaaacaaaacgaaaacCAACCGAAATCAGAAACCAATACAATAGTCAGCCCAGGTGCCACTGGGAAACAAACTCCAAACACGCAGCCAGGAACCAATAAAGATCTTCCCCAAAGTGGGCCTAGTTTGAGCAGTAGCTCAACAACAAGTCTTGACCGATTGCCTTCTCCTGTGTCTACTAACACTGTAAAACAAAGTGGAACGTCAGTCAAGCAGGAAAGTACCCAGAATCCAGGTATTCACAATAGCAGGGATCATCACGGCCAACAATCTCATGTCAAACAGCAATCACAGAAGCAACTtcatcaacagcaacaactTGAGCAAccacagcatcatcatcaccagcaagTACTACATCAACAGCAACACCCACCACAGAATATTGGCCATTTTCCTTCGCTTGCAAGTTCATTCGTCCCTGCTTCTGCAGCAGCTGCTAGCTCTTTCCCAGTTCCTTCTCAAAGTGCATTGAAAAGCGTTCATCTGATCCTaagcaaagaagaaatggATATTATGAACAGAGCTTGTGGCCATCCAGTTGATTATAGGTTAAACCAGTTACCTCTAGAATTTGAGATTCTTGTCACAGATGTAGTGGATGCTTGTCATTTCTGGGCTATCATTGATACAAAGACAGGAAACTGGAACAGGCTTGAAAATGTAGAAAGTAAGATACGACAGTTAAATACAAGACCAAATGTGCCTCAAAAATATACCATTGGAGCTGGGAAATTCTCAGAGAATAATGTTTGGTATAGGTGTTTTGTGCTTGATGTAGCCTATGATGGAAAGTATATCAAGGTACTATATACTGACTATGGTAATGCTGAATGGATACCATTGGAGAGATTTACTACCCTGGACCAACATCTGTGGTCTCTTCCTCCCCAAACCAACCCCTTTCATCTTGCAGGTTTGGAGCTATCAAATCATGATATCAAGAACATCCAGGAAGGAGCTGCATTCTTAAAGGAACTTATTTGCTTCAAGGCATTTATTGCTAAAAAGAAGCCCACGACCAACCCCCTACAGCCTCATATCATAGAGGTTGAACTTTTTGACAGACTTCAGCCAGATAAGTCAATCAACAGTGTGATGTCAGCTACGAGGTTTGTCAAGCCAATGGTGAATCCAGGCTCCCAGTCCAAAGCACCAGCAAAGAGTACTCAGAGTTCTTCCCAAGACAAGAGGAATAAAGATTTTGAGGCGAAAATACAGATTTTGCTCCAATGGGTCCATAGTCCTGAGTTATTATATTACAGTCTGGTTTCGCCAAAAACGGAGGAAACTTTAAAGAAGATTGAAAACCGTCTAAATCAAATCCCAGCGACAGAAATGATCTTTCCAATAGTTGGTCAGTTGGCCTGTCTCATGACTATGAAACATGGACGAAGACGTGTTAAGATTCTGGAGATTCTCAAGTCTATTGCTGTCTTCCATACTGTTACTGAGGTTAAAGTCATATGTCTTGATTATGGGATGGTATGCCACGTGCCTGTCACTTCTCTCTTACAATTACCACTCGATCTGGTCCACATTCCAAGTCAAGCAAGACGGGCATGTTTGGCGGACGTCAAGCTACCAGCTGGTAAAATCAATTGGCCCTCCAGCGCTCTGCAAATTCTTCTAATAAGTAAAGCCCAGATATTTGACGCAAAGATTGTAGACAAACTGCCAGATGGGATGGTTGTTATCAAACTTTATAACAAGCAAGGAGAAAACATGAACGAAAAGATCATGAATTTTATGAAAGAAtatagaagagaaaaaaacactTCTTTATCCGAAAATATGACGAAAGCGTCCAACGAAAATGTTCAAACCAATGGAGGAAACCCCAGCAAAAGGGCAAGCGGGCAAGAGCAGGGGTCTCGTGGTTCGACCTCCTCGCCGCTTAAGGAATCAACAGCTGGCACGGCGCAAGCACaaaagacaccagttggggcaAATTTTGCTGGGAACCAATCAAATCCCGCGACACATTCGACTGGAAACCAAGCCCACAagagccaatcagagaaggcgTACTATCCAAGTTCTTCGGAGTTCCCGTATAATTCGGTGACGAGTGATAAATCACGTATAGTGGCTCCAGGTCAAAATTCAACAATGAATAAGACTGATacttataattattatatgcCCCCACCGCCATCTGCGCATGCCCCACATTCGGAGGCCGTCTACCAAGGCTTACCCTTGAATAGGCCAGCAGTTGATAACAAAAACACACGAGATACTTCAACCAATGAGCGACTTCCAAGTCATCGAAACGAAAATGTACCGGCATTTTCAATTCCTGACAGTATGAACACAGCGACTtttagaaaggaagaaaatggcAAGTTAGCAAATGGACACAACTCTTTTATTCCTAAGCATCAGGATAAAAGTCCTATTAATCAGGAAAACAACCCTACCGTTCTTACTGAAAATGAAAGATAtgagaaaatgacaaaaggaAAAGGGTCTTCAGTTGCCACAAAAGAGGGGCATAAAACGATGAAAGAACCGGAatggctgaaagaaaaagagctgCTGCTTGCAAGAAAGCAGGCTCAACAAGAATACCTTGAAAAACTCACTAAACGTTCATCAGTCAAACCTTCCACACAAAATAACCTGCAAGAACTTAAACTAAGACTTGAGAAGCAAGTAAGAATTAAAGAACTTGAAAACAGAGCTCTGAAGCTGAGGAAGGAGGTAGAAGCCTTGGAAGCCGCAAAAGCTGAACTGCAATATCAATTGATGAATAGTTGA

Transcript

ENSKFPT00000012961

AATCTGGTTTTTGGGGTGACTAATAAGGAAGTGTATTCGTCTAGTCATGCTCAGAAGGCCGAAGTGAAGGGAATGTTAGGACCAAAACATAGGCCTCCCTCTGAGTGGAGGAAACCAATGAATAAGAACTCGAAtcaaaaaggaggaaaggatGAAAGGAAGATAGACGTGGCTAAAGATTTGTCTTCTGTAAGGGTAACAGTTGGGAATAGGCAAGTTAATTACGAGGAACGAATTTTCCCCAATATACATGGGTTGTATGGAATTCACATAAGCAATCTTCCCATGGCATGTACTAAGgaTGAACTGGAGAAAATCTTTAAAGAATATCCCACCCTGAAAGAATGTAAAATTGTTAACAAACAAAAGAATTCCCTGTATGCCTTTGCCAAGTTCACCAGCGAACAACATGCTATAATGGCAATGCAACAAAAGAATGGATATCTGTTCAAAGGTTACaagttaaaaataaacaaagcaaaagagGGTAAAGGCGAAGAAACCCagaaacaaaacgaaaacCAACCGAAATCAGAAACCAATACAATAGTCAGCCCAGGTGCCACTGGGAAACAAACTCCAAACACGCAGCCAGGAACCAATAAAGATCTTCCCCAAAGTGGGCCTAGTTTGAGCAGTAGCTCAACAACAAGTCTTGACCGATTGCCTTCTCCTGTGTCTACTAACACTGTAAAACAAAGTGGAACGTCAGTCAAGCAGGAAAGTACCCAGAATCCAGGTATTCACAATAGCAGGGATCATCACGGCCAACAATCTCATGTCAAACAGCAATCACAGAAGCAACTtcatcaacagcaacaactTGAGCAAccacagcatcatcatcaccagcaagTACTACATCAACAGCAACACCCACCACAGAATATTGGCCATTTTCCTTCGCTTGCAAGTTCATTCGTCCCTGCTTCTGCAGCAGCTGCTAGCTCTTTCCCAGTTCCTTCTCAAAGTGCATTGAAAAGCGTTCATCTGATCCTaagcaaagaagaaatggATATTATGAACAGAGCTTGTGGCCATCCAGTTGATTATAGGTTAAACCAGTTACCTCTAGAATTTGAGATTCTTGTCACAGATGTAGTGGATGCTTGTCATTTCTGGGCTATCATTGATACAAAGACAGGAAACTGGAACAGGCTTGAAAATGTAGAAAGTAAGATACGACAGTTAAATACAAGACCAAATGTGCCTCAAAAATATACCATTGGAGCTGGGAAATTCTCAGAGAATAATGTTTGGTATAGGTGTTTTGTGCTTGATGTAGCCTATGATGGAAAGTATATCAAGGTACTATATACTGACTATGGTAATGCTGAATGGATACCATTGGAGAGATTTACTACCCTGGACCAACATCTGTGGTCTCTTCCTCCCCAAACCAACCCCTTTCATCTTGCAGGTTTGGAGCTATCAAATCATGATATCAAGAACATCCAGGAAGGAGCTGCATTCTTAAAGGAACTTATTTGCTTCAAGGCATTTATTGCTAAAAAGAAGCCCACGACCAACCCCCTACAGCCTCATATCATAGAGGTTGAACTTTTTGACAGACTTCAGCCAGATAAGTCAATCAACAGTGTGATGTCAGCTACGAGGTTTGTCAAGCCAATGGTGAATCCAGGCTCCCAGTCCAAAGCACCAGCAAAGAGTACTCAGAGTTCTTCCCAAGACAAGAGGAATAAAGATTTTGAGGCGAAAATACAGATTTTGCTCCAATGGGTCCATAGTCCTGAGTTATTATATTACAGTCTGGTTTCGCCAAAAACGGAGGAAACTTTAAAGAAGATTGAAAACCGTCTAAATCAAATCCCAGCGACAGAAATGATCTTTCCAATAGTTGGTCAGTTGGCCTGTCTCATGACTATGAAACATGGACGAAGACGTGTTAAGATTCTGGAGATTCTCAAGTCTATTGCTGTCTTCCATACTGTTACTGAGGTTAAAGTCATATGTCTTGATTATGGGATGGTATGCCACGTGCCTGTCACTTCTCTCTTACAATTACCACTCGATCTGGTCCACATTCCAAGTCAAGCAAGACGGGCATGTTTGGCGGACGTCAAGCTACCAGCTGGTAAAATCAATTGGCCCTCCAGCGCTCTGCAAATTCTTCTAATAAGTAAAGCCCAGATATTTGACGCAAAGATTGTAGACAAACTGCCAGATGGGATGGTTGTTATCAAACTTTATAACAAGCAAGGAGAAAACATGAACGAAAAGATCATGAATTTTATGAAAGAAtatagaagagaaaaaaacactTCTTTATCCGAAAATATGACGAAAGCGTCCAACGAAAATGTTCAAACCAATGGAGGAAACCCCAGCAAAAGGGCAAGCGGGCAAGAGCAGGGGTCTCGTGGTTCGACCTCCTCGCCGCTTAAGGAATCAACAGCTGGCACGGCGCAAGCACaaaagacaccagttggggcaAATTTTGCTGGGAACCAATCAAATCCCGCGACACATTCGACTGGAAACCAAGCCCACAagagccaatcagagaaggcgTACTATCCAAGTTCTTCGGAGTTCCCGTATAATTCGGTGACGAGTGATAAATCACGTATAGTGGCTCCAGGTCAAAATTCAACAATGAATAAGACTGATacttataattattatatgcCCCCACCGCCATCTGCGCATGCCCCACATTCGGAGGCCGTCTACCAAGGCTTACCCTTGAATAGGCCAGCAGTTGATAACAAAAACACACGAGATACTTCAACCAATGAGCGACTTCCAAGTCATCGAAACGAAAATGTACCGGCATTTTCAATTCCTGACAGTATGAACACAGCGACTtttagaaaggaagaaaatggcAAGTTAGCAAATGGACACAACTCTTTTATTCCTAAGCATCAGGATAAAAGTCCTATTAATCAGGAAAACAACCCTACCGTTCTTACTGAAAATGAAAGATAtgagaaaatgacaaaaggaAAAGGGTCTTCAGTTGCCACAAAAGAGGGGCATAAAACGATGAAAGAACCGGAatggctgaaagaaaaagagctgCTGCTTGCAAGAAAGCAGGCTCAACAAGAATACCTTGAAAAACTCACTAAACGTTCATCAGTCAAACCTTCCACACAAAATAACCTGCAAGAACTTAAACTAAGACTTGAGAAGCAAGTAAGAATTAAAGAACTTGAAAACAGAGCTCTGAAGCTGAGGAAGGAGGTAGAAGCCTTGGAAGCCGCAAAAGCTGAACTGCAATATCAATTGATGAATAGTTGATGCCATGGTGGTGGCCATGCCACTTAAAAAACATCCACAAGGAAAATGTCCTTGGGTTCACCAGATGAACAACGAAAACAGAGATAATAGTATAACCCAAGTAGCCATCAACCCTTCGTGTCACACAGAATTATCAGTAAGACTGTGTGATATGGGATTTTTGCGGTCGGGTGGGAATATGCATGACATATTTTGCTACCAAGTACATTTCTAACTTCACGAAATTATTGAAGTAGAAATGATAGTTGAGGTAAAAACAGACGACGAAAATGTCCAAATCAATAGTTTGTGTCTTCAAAATTAGAAGAAAATATGAGAAGCAAGTATCCTCAAAAAGATACACTCGattgaaaaaacgttgtcgggtcGAAAATCATAGAACATAGAAGCTGAGGCTTCGCAGGGTGCATGGGAAGTACGTTAATTAGATGTATGACATTCATTTGTGTCGTCCATGCAGTTGGTACAGAATGCACAAAGCGTACATCTAATTAACGTAATTCCCATGcatcctttcggtctcagctcTATGATTTTCGACCCGACGTTTTTCAATCGAGTGTAAACAATTAAACTGCTGACTGGTTTGCATTTTATGACAAAAAGGGCTTTTGTTTCTGCTAAATTTTCGAGctcttttttgctttgaaaaaatccTGTAAACCAGCTGGAAACTGCAAAAATTGCTATCGTTCTAACAAATATAAGAATTTTAGAAACATAGAGATATATAAATTAAAAGCGTTGATTATATTGAct

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5M7P8	Tudor domain-containing protein 7 OS=Xenopus tropicalis OX=8364 GN=tdrd7 PE=2 SV=1
Q6NU04	Tudor domain-containing protein 7 OS=Xenopus laevis OX=8355 GN=tdrd7 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003787 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00567 all species →	TUDOR	Tudor domain	Domain	Interproscan
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035437 all species →	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR002999 all species →	Domain	Tudor domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10501 all species →	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18405	TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.