Gene detail

Detailed information of ENSKFPP00000012181.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_031560747.1, uncharacterized protein LOC116296797 isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKFPT00000013084

tgtaaattttcttcTCACTGCTAAGGAATTCAACTTCTTAGAAAAGTTTAGacgtaaagaaaaatgataagCCAGCAATGCTTAACCTTGTATCAAATCTTTGTAAATTGATATAGCCGATGACGCCATGTGGTATAATCTCGTACACAAGGCGTTGCTTAGTGATACCCAATCACGACCCTCAAAAGATTGCTTTGAAAAGGATCCCAACCAAGAAATTCAAGTCTTGTTCGATGGAGAGCATGGAATCCTTTACTAAATGACGTTCACAGTGGAATATTGTGGATAGCTGGTCGGAAATGCTAGTGGAAGGGTATCTGGTGTTGCTGCTGGCTCAGCTGCTTCTTCACAATGGTAGTGGATGTAATGTCCGCTATTGCAAAGTGTCCGAGTGGTCGACTTGGTCAAGCTGTTCCCAGCAATGCGGCAGCGGAACACAGTACCGAACAAGACACAAAGTCGTTTTGGAGTCTTGTGGAGGTGATTGTTATTATCAACTCCGCGTGGACAGGGACTGTCCGAAAACCTGCCTCAATGGAGTTACACCTTCATTTTGGCAATGTTATTGTAAGACTGGCTATTCGGGATCATGTTGCCAGTTTCAATCAAGAAGAGTAAAGAGAGATGGCAATACCAAAACGAATCCGCCATCACAGGAGTCGAGTGGAACGAAATGCGGAACCGGCTGTATAGCAGGAATCTGTGTTGGAGGGGGATGCTGTGGTACGGCACTAATCCTCTATTTCTGCTGGAGGAAGGGTTGCCACGAATCGACTGGCAGTGTGGTGAACTTCATCTGTTGCAACCAAGGAAATGCGACTGTCCTCCACTATAACAATCAAGTAGCACCGGCATCGAATGATAGTGATCAGCGTACTCCTGGCAATCCTGGTGAAGCCCCTTCTATTTATACTTGCGACCGCAACGAATGTCAGGTGAATCCAAACTACTGCCGACCAGGAGGTTATTGTGTCAACACCCATGGCAGTTTTCGATGTCTCTGTGGTCATGGGTATGTTTTTGCCCACGGCGGGACAGCTTGTGTAGAGAAACGAAGTGACGAGGCAAATCCAAAATCACGTGCCCCATCGAGTGGTCAAAGTGACAAGAACATGGTACCGATCGTCTGTGGAGCAACCTTTGGGTGTTCACTTTTGGTAATGGGAATAACATTCTTGGCgcgtttttgctctaaaaaaCAACGTCAAAGTGCAGCCGCCCAGTACAATCCTGCACAACCAGTATCATCGGTTATCTTCAATGGAAACTCCGCTTTACATGGAAATATCTACACTGGAAGCGTTGCTCCAGGGGAAAAGGGTAAAACAAGAGAAGCAGCATTTTCTCAGGCCCCAGAGACAAAATCATGGAGTGATTACGATCAGCGAACTGGGTATGGCAGTCATCCGCATGACATTTTACGTATTGTCAGTCCGCCTCCTTATTCCAGTTCAGGAAGTCCTGGTTGTGACTCTCCTAGTTATACAGGCAATGGTGCCCTTCCCGGTACGCCAATCTACGGGTAGGGATGACCTCCCCGGTACTCCATTTCTAGCTGTAGGCCTCACTGATTGTCAAGTACTAAACATCCTATTTTGTGACCCTCTCTCCTCCTACTTATCTACTTGCCAGCTCAGCTCATATTAACGGGACCTCTCAGAAAAGTTTGGCAAAGTTTTCAAGAATGTAATGACATTGGTCGTTTTCAAACTACGAAATGCTCGTCTGAGACGGAAGCTCGTTTGATAAAGTTCTCGACAGATGTGAATTTCGAAAACTCGTCTTAGATTTGTATTTGTCGCTCATAATGACGGAGAAGTGCTGGGCCGAGCAAAGGGAGCTTCGAAAATGGTGgcatttcatttcatatttaaaaaaattattgataaaCAGGAATAAGCGATGTGAAAATTATGATTACATGTCGAACTTTCTGGTTCCTATTGCGGCTTCCTCTTTATTAGTTCGGTTCAAAGAACTCCTAAGATTACTGTATGAACGAACCTCGAAGAAACAGTATTTGGTGGGAGTAGattataaaacaaataaaatataaatagcagagttttcattaaaaataaGACCAAACCCTATTGGTCTGAATATTAGGCGTTTGACTTTATGAACGACTGCATTTTACTCGTGTCGTTATTACAACAATTTTATCAAGCCATAACCAGAAAGTACAGTATTCCAAGGTCaaattcagacggcgtactttcaaTGAGCCATACTTTAGTGGAATTTTGGTTGGCCCAAAAATCGTGCTTATTCAGCCAGGCTATGTGGTAGTGAAGGCATGAAAGTGTCCAGTGTACTGAACCGTACCAATTTGCATGAgtcgtactcagttgattcagacgtaCTTTCCACGCACTTTACTGTTACAAAAAAGTATGGCTCATGAAAGGCAAGTCGTTTAAACTTGGCCTATAATAAGTATTGTAGTCCAAGTTATAGAGAAAAGAAGTCAAGGATAAAATACGAAATAATACTTACAAAACATCCATCTCTGTACGTCAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan