Gene detail

Detailed information of ENSKFPP00000013458.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_031549288.1, uncharacterized protein LOC116286841 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKFPT00000014535

atgtctttgtttgatCTGATAAAGGATAAGCCTCCCGTTGTTGCTAACAGCGACGTTCCATGGCCTCCGCCGAACAAAACCGTTGAGGTTTCGGGCGTTTTGTCCGCGCAAACAGCAGTTCCATTCTTGACATCTTCGCCATTATTTCCCGCCAAACGATCGCCAAGTTTACGAGAATTTTTGAACCCAAACTACCGTGATCCGCGTGAGGTAAAAGAAAAGGATCCTATGAGCGAAACTAGTGATATACTCCATGCTATTGAGAAGAATATTTCTTCAAATAGTTTGAGTAAAACAGATTTTGACTTGCAAAGAAGAATGCGCTACAGAAGTTTGAGCACGACTTGTCTTACTGAAGAAAAATCACTTGAAAAACTAACGAAAGCCAGCGGAGAAACCCATACGACTTCCATGGAGGAAAACCAGGATTCTGAGACGGTCTGTGGGACCTCGGAAACTACAAAGCCTAAAAACTTGCAAAATCCAACTTTTAGCAATTTATCTTCTTCAGAAAAACAGCAAGTTCTCCAAGAAGATAACTGTATAGCTCAGGATGTTGAAAAATGTGATGCTCTGTCTGAACCTAGTGGTTTCCACAATGATGACAATAGTCAGAAAACATCTGAAATTATGAATTCTAATAAGGAGGGACAagaaaatatttcctcgtttccAGTTTCTGCCGAAAAAGTTTCAGCATTGAAAAGGAAGATCACAGAAATTAAATCTGGAATGATGAATGAAGAATcagcaaagaaatacaaaatagCATCAGCtgcagaaaaacaagaaaaccagTTATTTATCGGTGAACATACAAAGATAGTTTGTACTCCAAAAAGAAAGATGACAGAATTGGGATCTATGGCAACAGACAgagttttgataaaaaaagctAGAAAAGTTTCTGAAGAGGTTTGTTCAGGTGGATTTTCTGAGGAGCCAGGGGATGTGGAAGAAGGATTGTTATTAGCAAGAGATGACTccaatgaagagaaaaagacaCTGGACATGGCAAATGAAGCTTCAGTATTGCCTTTGAAGGCTGACAAGGGAAGCACACAAAGCAACAGTGCAGAAGAATATGTGGATGATGAATGTGCAAAACATGAGATATCTTTGAATGATGAAAGCCAAGAGCATGTAGAGGAGAGATTGCCAGAGAAAAAGACACTGGACATGGCAAATGAAGCTTCAGTATTGCCTTTGAAGGCTGATAAGGGAAGCACACAAAAGCATGTAGAGGAGAGATTGCCAGAGAAAAGGACACTGGACATGGCAAATGAAGCCTCAGTATTGCCTTTGAAGGCTGACAAGGGAAGCACACAAAGCAACAATGCAGAAGAATATGTGGATAATGAATCTGAAAAACATGAGATATCTGTGAATGATGAAAGCCAAGAGCATGTAGAGGAGAGATTGTCAGAGAAAAGGACACTGGACATGGCAAATGAAGCCTCAGTATTGCCTTTGAAGGCTGACAAGGGAAGCACACAAAGCAACAGTGCAGAAGAATATGTGGATAATGAATGTGCAAAACATGAGATATCTGTGAATGATGAAAGCCAAGAGCATGTAGAGGAGAGATTaaaacaagacacaTCATGTGCAGTACAAGAATCCACAAGTAAAGaggatgaagaaaaagaacaaccCAATTTGATAACTGAAATATCTTTGAAACCTGATACTGTTTGCAATAAGCTAAAGAGAGGTGATTTGCAAGTTGGAGAGCAAGAAATGCGAGAGTTGTCTCTGATGGCTCAAAGTTGTACATCCTCACCAAGCAGAAAAGGAGAAGACACCATTATAGATACTGCAAAAGAGAACAGAATGATTGAAGACCAAACTAGAAATACTGGCCTAGCTGATTCCTCACATAACATTGAACTTGAAACTGAAGACTCGACAGAAAATAGGCCTCAAATTTCTAAAGAACCATTAAAGGataaaattgaaattcctCAAATTCCACAAAATGTTAAATCACGGACTTTgttacaaaagaaaattttcatTACAGATTCCAGTGAGAGTTCAACAGAGACTGAAGCTAGTGACATAGATTTACAAGAAGCTACCAATCAGGATCAATGTTCTAAAAAAGTTCCTGACAATGTTACACCTGCATCAAAATCCAAAACTTCATTGGAAGGGACCTCTGATCCCAGAAAAGACTTGCAGCAAGAAATGGCATCGAGAGATATAGAGATCAGTGATAGACAAGtattgattgatgatgatacaaGTGCTTTGAGTGATTCTGTTGTTGAAGATAGCTCTGaagtagatgatgatgatcgttGGGATGTCTCAGATCTCGAGAGTGAGGAAGAATCTCTACAAGTTCTGATATTCCAGGAAtccgatgatgatgatgaagatgatgatgatggattggAAGAAGGAGAGATTGAGGCAGACAGTAGTGAAGAGAGCTGTGACTTAGAAGAAATTATATTGGATAAAAGTGAGCAAAATGATGATCCTAATGAAAGCAAGCAAAAACTAAATGGTCAAAATATAGGAAAtttaagaaatacaaaaatatcaaaaagcagcaagaaaaatagaagaaagaagagaaacagATTATTAAAACAGAGCAAGAAAAGCTTGCCCCCTAGAAAGACAACTGCAGCTGATGGGAGCAGAAGGAAATCATTGACAAAACCAGTGTTAGACCAAAATACATGTTCTACAAGTAAGGCAGCACCTGATAAAAGAATGCAACACATTGAGAAGGAAAGCCAGGGGGAGTTCAGCCTGCTTTCTACTTTGGCTAGTACCGCAGTCATGGATGTCACTGTTGCTGCCAGTGAAAAGGAATTGatcaagaagaagacaagagGAGGCAAACCGTCTGctgaaaggagaaagaaattaCAGAAGAGATGGAATGCTTACCAGGCGAGAATAGCAGAGAGAAGAAGACAGGACATCAGGTTGGAGCCGCTGCCAAGGCCTCTCTGCACCTATTACTTAGGCGGTTTTTGCAATAAGGGTGATGAATGTCAGTTCAGGCATGAGGGAACTCCAACAAAGAGTCCTGTTCTTTGCAAGTTCTATGCAAGTGGAGTTTGCGCGAAGGGGGATAGATGTCCCTACCAACATAATATCCTTTATACTTACAGGATAAACCTTTTCCCTGAGTCCATCATACACATAGGTAAAGCACAACGAGAGCAAAACAACTCGACTGATGCTGTGGATGGTAGTAGTGATCAAAAAGAACTTGCCACTTCCCCGGATGGCAACGTTGCACCTGTGCAAGAGAATCCATATTCGGTTCGCTATGGCTCCATCGACGAAGAGGATGCCAAGGGGAATCTCACTGGCGTTCAAGAACGAAGTACTGGATTTAAAGAAGAACCGGAGAAACCGAAGATAGAGGAAGAACGGCAAGATGAACCTAGTCCAACCTCAAGGCCTTCCTACTTGGTACCTGGGATGTATACAAACTGA

Transcript

ENSKFPT00000014535

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14608	zf-CCCH_2	RNA-binding, Nab2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR045124	Family	Protein suppressor of sable-like	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13119	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05724	FGD5_6; FYVE, RhoGEF and PH domain containing 5/6	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala