Gene detail

Detailed information of ENSKFPP00000017072.1 in Condylactis gigantea

Genomic Location: chr2:22041807...22059078
NR annotation: XP_031550651.1, neurabin-1-like [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSKFPT00000018398

ATGGCTACAAAAACGACTCAACTTCGTAGAGACCGTGTGACAGCGAGGAACGATTTTGGTTATGAAAGTGTCAGTCCAAAGTCTCAGCGAAGGACAAATTTGAACGTGGAAGTCAAAGGCAAAAGAACTAGTCGCCCGAACAAAGATGAACATTCGGtcaagtttgaatattcaaagtttgcTGTTACTCCAAAGAGGCTTCATCATACCGACACGGATTCAAATTTTCCAAACAAAATTAACCCAACGATAGCATCAAATGAAGAGGAACTAGAGGAAAATACTGTCAAAACTGTGGTTAACCGAAAGAATTCCGACCAGGAATCGAATAGATTGAGTGTCAGCAaactcaaaaacatttttgattcGCTAGCACCAAATGATTTAACGACCTCCTCCAAGCCACCACTAAAGCCAAGGCCAAAATCAGAAGCGATTGTGAATAAAGAACAAGCACTTGGGCCTACGATAAATCGGTGGTCAGTTCCTAGCTACGTGAAAAAGGCGCCTGCTTCCCAAAGTAGTCAGAATTATAAGATCTACGTAACCGAAGGCATTGCAGCGAAAAGAGCCAAATTTGAATCCAAATCCAATGAAAATCTTCCTTGTGTCCTAAAAAAAGGATATTCACCAAAATTATCCGATTTGGTGCCGGAGTTGACCGAGGGACTTCGATCGAGGACGCGGTCCGACCCTGGTGTAAAACCTAGACGACGGGGACAAAATAAACAGCGAAGCTACTCAGATGTAGGGCACATAAATGGGGAAATAAATTTATGTGGAAAAAGAAGATCGTTCGATGattcggcgatcggcaagccAAGGCCGCTAACTCGGCTGTCAAAATCAAGCAGTGTAGAGATTTTAGATGTTAGTGATATCAATCCTTCGAGAGAAACTCCAATGATTACTGAAGAACCACAACAAAGCCAAGTTTTTGAGTCAGCACCTTTAACACTTGATGATTATCACCTCAAAAATGGCGAGACTGTTGATAATATAGCAGAGGGGGGCAAGGAACCCAGGATTGATTCAGGAATTTCTTCATCAATGGAAAGCAGTGAAGGGAATGCTGAGGAATTTCAAAAGGAAGACCTGGAAGGACATATTTTGCACAAGAAGGAACACGTTGAGGCAGATGCTAAGGAAAGTGACATCACAAGAAAGGCAAATCACAAGCAGGTTAGAGATAATTCTCTAGTGTATGACAGACCAGGGGAAGTTAGAGAAGCATTATGGATGGATGAGGACGAACCACTTGAAAAACCTGAAGACCCAGCACCGGTGTATGTAGCTCCACAtatgaaaaaagagaagagtGATACAGAAGTTGACCGGCATTATAGCAGTAATGCAGAAGAGAAGGCCAAAACTCATGATGATAGTGCAGCATCGTCTGATGAAGAGAGCACTGGCAGCGTCATTGAGCATAGCTCACCAGAAGCTGATTCCAAAGATGTTTCccctgtttcttttctttttcaaaatcaaccTCTGGTTTCTGCATTtgccaagaaagaaaaaccgaAATCAAGGTCTTTAAAGTTTGCCGACAGTGAACCCGCTAAGTATTATACTTATAGTGCAGATGAATATGATAGAGGGAATGAAGAAATTGATCCAGTGACGGCATCAGCAGAATGGGAATTGGAAAAGAGAGTAGAGAAAATGGACATATTTTCTGTTGATTTACAAAAAGATGACAAAGGGCTTGGATTGAGTATCATAGGGCTTGGAGTTGGCACAGACACTGGTGTGGAGAAACTGGGTATCTTTGTCAAGTCATTGACAGGAGGAGGTGCAGCAGAGAAAGATGGCAGGATCCATGTTAATGATCAAATCATTGAAGTGGATGGTGTGTCATTGGTTGGTGTCACGCAGATGTTTGCTGCTCAAACCCTTAAAAACACAAGGGGAGTTGTAAGGTTTCTTATGGGACGTGAGAAAGGCAAAGTACATGCTCCACTCAAGGCCCTCAATGCTAACACCcaagaaacaaacaaggaaattgAAGAACTGAAGTCCAAACTTGCCAAGACAGAAATACGAGCTGATAGGGCAGAAGCCAAGTTGAAGAAGGCAGTGGATAAGTTGCAAGCATTGAACTCAAAGGCCACTAATGTCGATGAGCCATCAGACTCTGACACCAAGAAACTTCACCAATCCATTGAAGAACTGAATGAAAGAGCAAAGAATGCTGAGACTGACCTGGCTATTGCAGAAGCTGAAAATGCAGATATGCTGAAACAACTggaagaaagcaaaggaatGTATCTACTGTTGGAGAAGAGATATCACAGCTTGAAGACAAAGAACAATGAATATGAAGAGAAGCTAGAGAGGGAGGCCAAAGCTACAGAGACCATAGATAACTCTTTAGTTCAGGCCCTTCAGAACAGAATAAGAGAGTTGGAACAGGAGCTGAAGCAAAAGTCCAAGCCATCAGCTAAACGCAAGCCTCTTGCTACTGGCAACAGTGACAGCAGATTAGCTCAAGAACGATATTTCTCATTAGAAGCTGAGAAATTTGAGCGCATGGCTGCAGCCAAGACAGCAGAAGTGGAGTTGGACCTGGATATCATTCCTCCTACAGAACCCCTCAGCAATGACTACAACTTTGATAAAAAACGACTTGCTGAAGCACAGAATAAGACCCACAAGCCAACACGAGCTAGCTGGGCCTGCTCTAGTGAAGAGATTGATATCTTCAAGAGTCCAGATGatcaagaagaagatgatgatgatgaagatgatactGATGCCAGAGGAAAACAAGCCACTAGTCCTTCCAGGCAGTTCGGTCAAGGATTCGCTCTTCCTGGTTTTCCTATGGGTGGGTTTCAACTCAAAAAGACAGGACGAAATCTCGTGGACGAAACCTCAAGCGAAACCAGCCCATCCCAAGATAAAGAATTGCGAAGCAGCTATCCCCTAGCCATGAAGGACCGCTCTCAGAATCAAGTAGTGGAAAACTTACTAGAGAAGCAGCTATCTAAAACCAATGCCCGAGTGACATCACTGCCCAGTGCTCTGGACCAAGAGGAAGGAAGATCGACAAAAGTAAAAGATGATGAGGAATGCTTCTCTGGATCGGCCAACTCTCTCGAAGAGATCGAAGAAGCTGCAAGAAGGATTGACTCGGACCTGGCTTCTTCACAAGCCTCGTCACGTGGCTCGTCCCCATTCCTCCCTCCGGCGATGCCTTTACTCAAAATGAAGACGGTACCAGTCTCCGAAACCACGTATAATGAATTGGCTGTTGATGTGCCCCCGGAAATGTCAACAGACTCCGAGTCAGAAAATGCTGACAGAATTGGAGACAGTCCTGTGGAGATTCTTTCATTCAGCCCATCATCAGATAGTCCGTCCCTTGGTAGTGGATCATCTCGTTTATCTAACGCATGGTTGTCCCGCCCCGTGCAAGAATGGGACGTGCACCAGGTGAGGAAAATAATTTCTGAAACATTGATATTGTGTTGTTTaataaaagaaCTCAAAGCTCACACGGAGAAAGAAGGCAAAGtaaagaaacagaaagaaaaggatcAGAAATCAGGAAAAAAAGAGACCGCGCCAACCAGTCTGCAAGATAAATTCGAGAAGCTTGGCTTCATAAAGAAAGGGAAGTACACTGTGAATTCTCCGTGA

Transcript

ENSKFPT00000018398

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ULJ8	Neurabin-1 OS=Homo sapiens OX=9606 GN=PPP1R9A PE=1 SV=2
O35867	Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1
Q96SB3	Neurabin-2 OS=Homo sapiens OX=9606 GN=PPP1R9B PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004255 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF17817 all species →	PDZ_5	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR043446 all species →	Family	Neurabin-like family	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR040645 all species →	Domain	Neurabin-1/2, PDZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16154 all species →	NEURABIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0014069 all species →	Cellular Component	postsynaptic density	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0019722 all species →	Biological Process	calcium-mediated signaling	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0031175 all species →	Biological Process	neuron projection development	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000017072.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.