Gene detail

Detailed information of ENSKFPP00000019272.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_022308163.1, uncharacterized protein K02A2.6-like [Crassostrea virginica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKFPT00000020845

ATGCAATTATTTATTCGCACAACTAAAGATGAAGCTGTAAGCGCAATTAAAGGAAAATTGCCAGAAGTAACCCTCAAGGCGAACAACATAGACACACATATGCTGATTGACACGGGAGCATCCGTCAACATCATGGACGAAAACACTTACAAACTCATTGGGAGCCCAAAACTccaaaagaaacagaaatccAATTTGTTCCCCTATGGGGGAGAAAAACCTCTCTGTGTTCTTGGTCagtgtgatattttgatcgaaATACAATCCAAAATTCAGTGCCACAAGTTTCACGTTGTCAAAGGAAACAGTGGGTCGCTACTGGGATATACGACGGCCAAGGAGCTCGGACTGGTACTAATATGCAATAACATTGAAGACCCGAGTGTGAAATACCCAAATCTGTTCAAGGGAATCGGCAAGCTAAAGGATACAATGGTCAAAATTCACATCGATGAAACAGTGCAGCCAGTCGCACAAAAATGCAGGAAAACGCCATTTCACCTCAGAGATAaagtagaaaaagaaatcCAGAAGCTGCTCGATGAAGACATCATTGAAAAGGTGGAAGGTGAACCCACCCCTTGGGTGTCACCCATAGTAACGCCCCCCAAGAAGGAACCAGGAGCTATCAGAATCTGTGTCGACATGCGCGCCGCCAACAAAGCTGTCCTTCGCGAACGACACCAAATGCCAACTGTCGATGAGCTCATTACAGACCTCAATGGAAGTTACCACAAGTTAGAGCTGAACTTTGGAATTTCCTCTGCCTCTGAGATATTCCAAGAAACCATCCGCAACACACAAGAAGAGCACGATAAAGCACTAGATGCAACGTTTAAGCAACTTAATGACAAGGGACTCACACTCAACAAGAAGTGTCTGTTCAACCAAGATAAGATCGAATTCTTCGGATTAACGTTCAGTGCGAAAGGTGTATCCCCTGATCCCAAGAAGATAGAAGGCATCGCCAACACTGAACCGCTACGACGCCTACTGAAGCAAGACACACCCTGGGCATGGTCAGGCGATCAAGAGACAGCGTTTCAAAAGTTTAAGGAAAATCTAACAGCTGATCCAGTAATCAAATACGTCGACCCCAAGAAGGACATTGAAGTAATTACAGACGCCAGTCCTGTAGGACTCGGCAAGATACTAGTACAGAATGAGAACGTAGTTGCCTATGCAAGTAGGGCACTAACTGATGTTGACACTCGTTATAGTCAGACAGAACGAGAAGCACTGGCAATAGTATGGTATCGACCAGGTGAAGAAAACCCAAGTGACTACTTCTCAAGACACCCCCTTGATAAAGGTAGTGCAAGACCATCACGAGGACAGAAAATTGCAGAACAGTACGTCAACTTCATAGCCGACACATCAACTCCCAAATCCATAAGTCTCGAAGATGTGAAGAAAGCAACGGCTGAAGACAAGACAATACAGAAGGTTATGTACATGGTCAGAACAGGACGTTTGTACGAAATAAAGACATGCAAAGACCAAGATGTCAATCAACAAGAACTGCACTTATTCCAAAGTGTTCGAGAAGAACTTACTTGTCATTCTGACGGCATTTTGCTCCGAAACGATCTTATCGTAATGCCGAGCAAGCTGCGCGACCAAGCCATCTCAATAGCACATGAAGGACATCAAGGGATCAACCGCACCAAGGCCTTCATCAGGTCAAAAGTTTGGTTTCCCGGAATCAGTGAGAAGATTGAAAACGCAGTCAAGAGCTGTTTAGCATGTCAAGCTGCTACGTATGCAAACACTACGTATATGGAACCACTAAAGATGTCAGACATGCCCGACAGACCATGGGAAAAACTGAGTGCTGACTTCTGCGGACTTCTACCCACAGGAGAGTACTTATTCGTAATCACAGACGAATACTCCAGATACCCCATTGTAGAAATCACCAAATCAACCTCAGCTGACGCTGCGATTCCAAGGTCAAGGTCATTTTTCAATTTGGCGAAACAAAAGATGAAAGAGTATGCTGACAAAAGAAACCATGCAGTACGACGAAACCTTAATGCTGGAGATTCAGTTCTCGTCAAGAAAGAAGGCAAGGGAAATAAGTTGTCAACCCCCTTTGAACCAGAACCATACGtaattacatcaaagaaaGACTCGATGGTGACTACGAAgtcaagcaagaaaagcatCACACGAAATACATCATTCTTCAAGATTCTGCCAAACACAAAACTCCACGGAAGAGAGGAAAAGGCTACAAGTGAAGAGGCGATCAAGGAGCCAAAGACGAGAGGATCGTGCAACCCAAAACCCTCCAGAAGAAACGCAGTTGTTGCAGAACAGCCAACAAGATCGGAGAGGATCCGAcgccccccccaccccccgcGTATCTTGAGGACTATGTGTTGA

Transcript

ENSKFPT00000020845

Protein

Uniprot

Uniprot term	Description
Q7LHG5	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15979	SND1; staphylococcal nuclease domain-containing protein 1	-	Viral carcinogenesis	ko05203	deepkoala