Gene detail

Detailed information of ENSKFPP00000021418.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031571369.1, ubiquitin carboxyl-terminal hydrolase 10-like isoform X1 [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

ENSKFPT00000023164

ATGCCTAATTCTGTAGAGGGTCTAAGTTTTGGTGATTTTTCTGTTGATGATTGGGAAAAGATCTTGAAAGATGTCAGCCAGGGCAACTCAGCCAGACCTCCGGTTGAGTTTCTCTTTGATTTTGGGTGCTCGGATGATGACCAAGTCGCTGACGATAATAAAGACCTTAACGTGAGTCAAGAAACTCACAACAAAAGTGTTCCCACTGGCCCTGATGATTCAGGAGTGGAGATAGGACAAGAAAGTGAACAAGAAGGTGTTCCTGCTAAACATCATGTTCCAGTTGTGTTTGTTCCAAACAAGAATGTggttgatgaagaaaacaccTTGGAGGAAGCTGGAGTTGAGTTGTCTTTTTGTGGGTGCAGTGTAATAGAAGACAAAGAACCTACCAACAATGGCTCAACTTATCTGCAAGATGCTGAAAACTTCCCCCCACTTGGCAGCCTACAAACACAAGATGCTGAGCGTTCTCGCAAACGCCGCAGGAAGAGAAAGCAGCACCAGAGGTCTGGGGATGTGCCATGTTCATCCAGTGAAGATAGTGACAGAGACAAGAGCCCTGCCAGTATTGTGGAGAGGGTTCCTCGTGTGAGGAGCGGTAGTGGGCTTGCAGGAAGTGAGAAAGGCTGCAGTGGTGCAACTGAAAAAAAGGGAGAAAACCAAGGCATCTCTGAAAATGCTGTGAAGAAAGGAGAAACTGGCcaggaaaataagaaaaccaaCAAAGAGGGTCATGATGCCAGCAGTACAGATTCTAAAAGCACAACAGAAACAGTTTTATCCATTGGTGATTCATCAAGCAGTCCACCTCAGAGTGATGTGGATTTTCACACTAACAAACTGCCACAAAACAATCCCAACACTCCTACTGCTACCACTGCCAATAACAGCACCTCTGAGACTAGTCCCATCCCCATTGAACCCACAAACAAGCCATCAAATGCTGCTCCTGTCAGCTCATGGGCTGATTTGTTTAGATCAACATCTTCTAAACAGCCAGTGAATAAAATGGAAACTCACAATGTTATTGCACCAAAGGAACCCGGCAAAGATAATAATgcaaagaaaatagaagaatCTTTGCCAAGAGTCATTGATATAGCCGAGGACAAAAGAGCTTTAAAAATTGCAGAGGCAATCAAGAAGCTGAGCCTGGATTATACTCACAAGCCACTGTTCCTGAGAGGGCTAATCAACAAAGCTAACTGGTGCTACATCAATGCTACACTACAAGCTCTGCTTACCTGCCCTCCATTCTTTAATCTTCTAAGGCAACTGGAGCCTTTGAAACACAAAGAGTCCACTTCCATCCCAATACTGGACAGCATGGTGAAGTTCTCACATGAATTTAATATTCTTCCAAAATCAGCAGCAACACAGGCAAAGAATGGTAAAATTGAATTCCGTACTGGGTCATCCTTTGAACCAAACTATGTTTACAAGATGCTATCAACCATTCAGAGCTCTCTTTCTGCCAAGGGCCGTCAAGAGGATGCAGAAGAATTCTTAAGCTGTGTGCTCAATGGAATCCATGAAGAATTGCTACAGCTGAAAAAGCTGCTAGAACCAACAACTAAACCAGTACAAGCAGCCACTGAGAAGGCAGCTACAGATGATCCTAGTATTGTGGCAGTCAGTGGACAAGATATTGacaagaatgatgatgatgatgacagtggagACTGGGAACAAGTGGGACCCAGAAACAAATCCAGCATTACTAGAATGGCTATCTTCCCCCAGTCTCTGGTGTCTGATATTTTTGGTGGATATCTGAGGTCATCCCTTCACCAGGCTGGAGCAAAAGAGTCTGCTAATGTGGAGCCCTTCTTTGATCTACAGCTAGACATTCAGAATGCGAGTTGTATTGAGGATGCCTTAAACCACCTTGCTGTTAAAGAAGAACTTCAAGGCTACACATGCTCCAAAACTAATGCACAGaTTGACATATCAAGGCGTGTCACATTTGAGAGTCTTCCAAAGATTCTTGTTCTTCATCTCAAGAGATTTATTTACTCCAAGAGTGGAAGCCAGAAGCTTCTTAAACATGTGGACTACCCACTGGATCTCACCATTGGCAAAGAATTATTGTCACCAAGTGTGAAGAACAAATACTCCATTGCTCAGAAGAACTACAAGCTCATAGCTGTTGTCTATCATCATGGTAAGACAGCATGTGGAGGGCACTATACCACAGATATGCACCACCCTATACATGGATGGGTGCGTGCCGATGACACTAAACTCAAAAGCGTTCCTCTCATCCATGTTCTTAAGCCAATACAAGGCAAGGACCCTTACCTGTTGTACTACTGTAGGACAGATCAGTTGGCTTAA

Transcript

ENSKFPT00000023164

CTAGTATCCAGTCCTTTTCTGTTGTGTAGTAAAGACATGACGTCATGCACAACGCTACGCATGCGTTGTGGTGTGTTTCAACATGGCGGACTGGTTCTTGTTGTGAAATCTTGTTTGAAGAAATTAAGAATGAAGGTTATTGGACAAACCTAGCTCATCCTGCTACGATTGCCTTGATATGCCTAATTCTGTAGAGGGTCTAAGTTTTGGTGATTTTTCTGTTGATGATTGGGAAAAGATCTTGAAAGATGTCAGCCAGGGCAACTCAGCCAGACCTCCGGTTGAGTTTCTCTTTGATTTTGGGTGCTCGGATGATGACCAAGTCGCTGACGATAATAAAGACCTTAACGTGAGTCAAGAAACTCACAACAAAAGTGTTCCCACTGGCCCTGATGATTCAGGAGTGGAGATAGGACAAGAAAGTGAACAAGAAGGTGTTCCTGCTAAACATCATGTTCCAGTTGTGTTTGTTCCAAACAAGAATGTggttgatgaagaaaacaccTTGGAGGAAGCTGGAGTTGAGTTGTCTTTTTGTGGGTGCAGTGTAATAGAAGACAAAGAACCTACCAACAATGGCTCAACTTATCTGCAAGATGCTGAAAACTTCCCCCCACTTGGCAGCCTACAAACACAAGATGCTGAGCGTTCTCGCAAACGCCGCAGGAAGAGAAAGCAGCACCAGAGGTCTGGGGATGTGCCATGTTCATCCAGTGAAGATAGTGACAGAGACAAGAGCCCTGCCAGTATTGTGGAGAGGGTTCCTCGTGTGAGGAGCGGTAGTGGGCTTGCAGGAAGTGAGAAAGGCTGCAGTGGTGCAACTGAAAAAAAGGGAGAAAACCAAGGCATCTCTGAAAATGCTGTGAAGAAAGGAGAAACTGGCcaggaaaataagaaaaccaaCAAAGAGGGTCATGATGCCAGCAGTACAGATTCTAAAAGCACAACAGAAACAGTTTTATCCATTGGTGATTCATCAAGCAGTCCACCTCAGAGTGATGTGGATTTTCACACTAACAAACTGCCACAAAACAATCCCAACACTCCTACTGCTACCACTGCCAATAACAGCACCTCTGAGACTAGTCCCATCCCCATTGAACCCACAAACAAGCCATCAAATGCTGCTCCTGTCAGCTCATGGGCTGATTTGTTTAGATCAACATCTTCTAAACAGCCAGTGAATAAAATGGAAACTCACAATGTTATTGCACCAAAGGAACCCGGCAAAGATAATAATgcaaagaaaatagaagaatCTTTGCCAAGAGTCATTGATATAGCCGAGGACAAAAGAGCTTTAAAAATTGCAGAGGCAATCAAGAAGCTGAGCCTGGATTATACTCACAAGCCACTGTTCCTGAGAGGGCTAATCAACAAAGCTAACTGGTGCTACATCAATGCTACACTACAAGCTCTGCTTACCTGCCCTCCATTCTTTAATCTTCTAAGGCAACTGGAGCCTTTGAAACACAAAGAGTCCACTTCCATCCCAATACTGGACAGCATGGTGAAGTTCTCACATGAATTTAATATTCTTCCAAAATCAGCAGCAACACAGGCAAAGAATGGTAAAATTGAATTCCGTACTGGGTCATCCTTTGAACCAAACTATGTTTACAAGATGCTATCAACCATTCAGAGCTCTCTTTCTGCCAAGGGCCGTCAAGAGGATGCAGAAGAATTCTTAAGCTGTGTGCTCAATGGAATCCATGAAGAATTGCTACAGCTGAAAAAGCTGCTAGAACCAACAACTAAACCAGTACAAGCAGCCACTGAGAAGGCAGCTACAGATGATCCTAGTATTGTGGCAGTCAGTGGACAAGATATTGacaagaatgatgatgatgatgacagtggagACTGGGAACAAGTGGGACCCAGAAACAAATCCAGCATTACTAGAATGGCTATCTTCCCCCAGTCTCTGGTGTCTGATATTTTTGGTGGATATCTGAGGTCATCCCTTCACCAGGCTGGAGCAAAAGAGTCTGCTAATGTGGAGCCCTTCTTTGATCTACAGCTAGACATTCAGAATGCGAGTTGTATTGAGGATGCCTTAAACCACCTTGCTGTTAAAGAAGAACTTCAAGGCTACACATGCTCCAAAACTAATGCACAGaTTGACATATCAAGGCGTGTCACATTTGAGAGTCTTCCAAAGATTCTTGTTCTTCATCTCAAGAGATTTATTTACTCCAAGAGTGGAAGCCAGAAGCTTCTTAAACATGTGGACTACCCACTGGATCTCACCATTGGCAAAGAATTATTGTCACCAAGTGTGAAGAACAAATACTCCATTGCTCAGAAGAACTACAAGCTCATAGCTGTTGTCTATCATCATGGTAAGACAGCATGTGGAGGGCACTATACCACAGATATGCACCACCCTATACATGGATGGGTGCGTGCCGATGACACTAAACTCAAAAGCGTTCCTCTCATCCATGTTCTTAAGCCAATACAAGGCAAGGACCCTTACCTGTTGTACTACTGTAGGACAGATCAGTTGGCTTAACAATGATGCAAGCAAACGACAGTCCCTCAATAAACAGTACTAGTCTGCTACTATTTTTGCTATTTGGCATGTGTATGGAAAGAATATGCATCAACAGGTAATGTCATGAATCTTCATCCATGTTGGATGGCTACTAACTGGGGTGAATCCAAGGGAGGGGTGCAAGGAGTGCGCACCTGGTCCTCAAGCAATGTCGTACCTTTGTCCCCATTTTTTGGTGATGCaaactgttttgttttgattttgtgACCTTCATGTAATTGTCACACCCCTCCCTGGCAAAAATTCTGGATCCCCCCCTGACTAATGAGAAGCTAGCCTAACTTATAGATAAATCAAGTCGTTTTTGTATAAGTGGTATGTATGGTTAGGATATATTATGGTTATGGcaggaatttcaatttttttatcaagatTGCAATACTGCTATGATACAGTGCGGTAAGAttcccactcatatgaaaACGACTAACACCGTGAGAAAACTTTTAAACCTGACAAATGGAATTAAGTTTTCTCATGATGCTATACATTACTGGTAAGCAAGTTACATGCCCACAAGTATGGCCATTTGTGTTTGAGCCGTGAACTGTGAACTTTTTGACTTATTTTTGTAAAGTTGCATTTTGGAAAATTCTAACATTGCATTACCATGGCTGGTTCAAGACATTTCAATGgaataaaatataatgaagATCTGTCAAAGCAGAGCAAGATTAACCAATCAACAGTAGGCTCATCTATGTTCCAGGGAGCTGCAACGAACAAGGTGTTGAAAAATTCctacaaaatagaaaaatgtttACAGTTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZJN4	Ubiquitin carboxyl-terminal hydrolase 10 OS=Gallus gallus OX=9031 GN=USP10 PE=2 SV=1
A5PJS6	Ubiquitin carboxyl-terminal hydrolase 10 OS=Bos taurus OX=9913 GN=USP10 PE=2 SV=1
Q3KR59	Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus OX=10116 GN=Usp10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005438 (this species only)
Ubiquitin family	DUB\|USP\|USP · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443 all species →	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018200 all species →	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889 all species →	Domain	Ubiquitin specific protease domain	Interproscan
IPR050164 all species →	Family	Ubiquitin carboxyl-terminal hydrolases	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR001394 all species →	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24006 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0010506 all species →	Biological Process	regulation of autophagy	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan
GO:0030330 all species →	Biological Process	DNA damage response, signal transduction by p53 class mediator	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11841	USP10, UBP3; ubiquitin carboxyl-terminal hydrolase 10	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.