Gene detail

Detailed information of ENSKFPP00000022013.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031559964.1, uncharacterized protein LOC116296141 [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Sequence

CDS

ENSKFPT00000023847

ATGAGGCCATCGCAAATGAATGGCGTGAAGTCGCGTGTAGTCGAAGTGAAAGTCCAAGGAATcgagaaaggaaaggacaaACATTTGGAGTTAATTCTTACAGTCAAGTGGTCTAATGGCGAGCAAAAGGCTATCGCACGGCAATACAGCATGTTCTTTGATTTACAGAGTGGCTTGAAGCAAATCTACAGGGGAAACCCCAGTGTTACGATCCCTGACCTTCCTGTTCCAAAGTTTCGAGGAGCCATGCTCTTTTCATCGTTAGCAAAGAAGGAAAGTAAAGTCATTGAGGAGTTTTGTCAGAAAATCATTCGCCTGCCTTCCGTGGTCTCTGATTCTGATATCGTAGAAAGGTTTTTCAGTGAATGGGGAACAGATGCAGTTTACcaagacagacaaaaaagagGCCCCCTCGAACGTCACCCGCCACCTTCCCCTGTGCCTGGGGAACGGTCCGGTGATCAATTAGTCGAGAAGTACAGAGCAATGGCTAGTTACAGCGGCTCAACGAGTGGGGAGATGAGCTTGGATGAAAACGAAGTGGTGACGGTGATAGAGAAGAACCAGACAGGTTGGTGGCTGGTCACCAAGGATAATGGACAACATGGTTTCGCGCCGGCAACATTTCTAGAGCCGTTAGATCCGAACAGAGAATCTGAAAGCGAAGAATGGATCGATTATGATGGAGAGTCACGTGTGTGGATCACCATACTGCCCTACAGGGCACAGAGTCAAGATGAAGTTAGTTACTCGAAAGGAGAAGAAGTAGAGGTCATTGCAACCAGTAATTTCGGGTGGTGGAAAGTCAGGTATCACGGCAAGATAGGTGTCACTCCAGCAGCCAACCTGAAAccaaagcaagaaagcaacgGAAGCCTTTTCAACAATCCAACCTATGTTTCTGCTGTCCGGCCAACCTCCAAGAGAGCATCTTTTACGAGTGTGGGACCCATCTATGCCAGCATCAAGAGACCACCACCAAGAAGGGATTCGAGTAAAGAAAACCTTTCACGTGCGGCACTTCCAAATCCAGATAATGCCAAAACTCTCGAGTACGCTGTCGTTCAAGTTAGTGTGCCGAGGTCAGGCTCTTCTGTGTCACCAACAGAGGGAGATGCTGATATGCTGTATTCGACTGTTATCCCGAAACACTTAAGACCTCCACCATCAAAAAGCCCCAAGAGTAGCAGCCCAGAGCGAACGTACGAAGAGATCAAAGAAGATCGCGCACCGACGCTGCCACCATGCTTCGTCAACAGCTACGACGATGGCACTTTACCCACCCCCCAAGAAGAACAATACTTAGAGCCTGTTGACTCCCAAAGACGACTTGCTGCTGAGGAAACCCCGACGAATAAAGTACCTGGGTACTTGAATGTGAGCAATGGGTCTAACTTGTTCAGAGCTGTCGTAGACTATGAAGTCCCCCCTGATCGCTATGAAGACTTGCCTGTCACAGCAGGCTGTATTGTGCGCGCGCTGGTCAAAGACGGACCATTCTATTGCGTATCAACCCTTGATGATCCACCTAGACAAGGCTGGGTACCCGAGCATGTCCTACAATGCGTCGATCGTAGGTCACTATCCATGGGCGACATCATGCAAGAGTCCACCAAAGACGAACCAGAGGTCGCCGAGAAATTAAAAGATCTTCACAACAAAACACCGATTCCCGCTCCACGCGGGCTGGACAAGAGGCGATATGCGTCTTTCGATGCCACTGGGAGCACTGGCGCTGAAGATGAAAATGCGGATGTCTATGACACAGTCTCAGAAATTGATTCTCTTAAACTCTCCGATATGGCAAGTTCTGCGCCTTGGTATTATGGTAAACTAAAGAGACAAACATGCGAGGAAATCATGCTTAAGTCAGCAAATGAGTTGGATTTTCTGGTCAGGGAAAGCAGTCAGAAGtttgcgTCTTATGTGCTTTCAGTAAAGTATTCCCGAAAAATTCGCCATTTTCCAATCGAGACAACACCAAGTAAGAAATTCGTGATTGGTAAACACGCTTTCGACTCGATGCCAGAGATCATCAGCTTCTACACCGAACACCCCCTGTTTTACACTCAAAACAAGGAAGCAATCTCTCTCGGACAACCTTTTAAACGATCGTGA

Transcript

ENSKFPT00000023847

TCATACACGTTGATCGCGCCACCGGCTCCGCCCCCATTCGTTCAGCTGAGCTACGGCTGATtatttcatcaacatcaataaATCAATATCCTGTTGTCCACCGTCTGACCACTAGCACCATTCTTGCCTTGTTTGCAACCGATTTACAACAACAGAGTTATGATTTCTAATATTTTAGCGCCAGTTATAAGTAGTATAAACTGAGATTAACTCCATTTTGGAAGCAAGCTGATAGAAGAAATGAGGCCATCGCAAATGAATGGCGTGAAGTCGCGTGTAGTCGAAGTGAAAGTCCAAGGAATcgagaaaggaaaggacaaACATTTGGAGTTAATTCTTACAGTCAAGTGGTCTAATGGCGAGCAAAAGGCTATCGCACGGCAATACAGCATGTTCTTTGATTTACAGAGTGGCTTGAAGCAAATCTACAGGGGAAACCCCAGTGTTACGATCCCTGACCTTCCTGTTCCAAAGTTTCGAGGAGCCATGCTCTTTTCATCGTTAGCAAAGAAGGAAAGTAAAGTCATTGAGGAGTTTTGTCAGAAAATCATTCGCCTGCCTTCCGTGGTCTCTGATTCTGATATCGTAGAAAGGTTTTTCAGTGAATGGGGAACAGATGCAGTTTACcaagacagacaaaaaagagGCCCCCTCGAACGTCACCCGCCACCTTCCCCTGTGCCTGGGGAACGGTCCGGTGATCAATTAGTCGAGAAGTACAGAGCAATGGCTAGTTACAGCGGCTCAACGAGTGGGGAGATGAGCTTGGATGAAAACGAAGTGGTGACGGTGATAGAGAAGAACCAGACAGGTTGGTGGCTGGTCACCAAGGATAATGGACAACATGGTTTCGCGCCGGCAACATTTCTAGAGCCGTTAGATCCGAACAGAGAATCTGAAAGCGAAGAATGGATCGATTATGATGGAGAGTCACGTGTGTGGATCACCATACTGCCCTACAGGGCACAGAGTCAAGATGAAGTTAGTTACTCGAAAGGAGAAGAAGTAGAGGTCATTGCAACCAGTAATTTCGGGTGGTGGAAAGTCAGGTATCACGGCAAGATAGGTGTCACTCCAGCAGCCAACCTGAAAccaaagcaagaaagcaacgGAAGCCTTTTCAACAATCCAACCTATGTTTCTGCTGTCCGGCCAACCTCCAAGAGAGCATCTTTTACGAGTGTGGGACCCATCTATGCCAGCATCAAGAGACCACCACCAAGAAGGGATTCGAGTAAAGAAAACCTTTCACGTGCGGCACTTCCAAATCCAGATAATGCCAAAACTCTCGAGTACGCTGTCGTTCAAGTTAGTGTGCCGAGGTCAGGCTCTTCTGTGTCACCAACAGAGGGAGATGCTGATATGCTGTATTCGACTGTTATCCCGAAACACTTAAGACCTCCACCATCAAAAAGCCCCAAGAGTAGCAGCCCAGAGCGAACGTACGAAGAGATCAAAGAAGATCGCGCACCGACGCTGCCACCATGCTTCGTCAACAGCTACGACGATGGCACTTTACCCACCCCCCAAGAAGAACAATACTTAGAGCCTGTTGACTCCCAAAGACGACTTGCTGCTGAGGAAACCCCGACGAATAAAGTACCTGGGTACTTGAATGTGAGCAATGGGTCTAACTTGTTCAGAGCTGTCGTAGACTATGAAGTCCCCCCTGATCGCTATGAAGACTTGCCTGTCACAGCAGGCTGTATTGTGCGCGCGCTGGTCAAAGACGGACCATTCTATTGCGTATCAACCCTTGATGATCCACCTAGACAAGGCTGGGTACCCGAGCATGTCCTACAATGCGTCGATCGTAGGTCACTATCCATGGGCGACATCATGCAAGAGTCCACCAAAGACGAACCAGAGGTCGCCGAGAAATTAAAAGATCTTCACAACAAAACACCGATTCCCGCTCCACGCGGGCTGGACAAGAGGCGATATGCGTCTTTCGATGCCACTGGGAGCACTGGCGCTGAAGATGAAAATGCGGATGTCTATGACACAGTCTCAGAAATTGATTCTCTTAAACTCTCCGATATGGCAAGTTCTGCGCCTTGGTATTATGGTAAACTAAAGAGACAAACATGCGAGGAAATCATGCTTAAGTCAGCAAATGAGTTGGATTTTCTGGTCAGGGAAAGCAGTCAGAAGtttgcgTCTTATGTGCTTTCAGTAAAGTATTCCCGAAAAATTCGCCATTTTCCAATCGAGACAACACCAAGTAAGAAATTCGTGATTGGTAAACACGCTTTCGACTCGATGCCAGAGATCATCAGCTTCTACACCGAACACCCCCTGTTTTACACTCAAAACAAGGAAGCAATCTCTCTCGGACAACCTTTTAAACGATCGTGACATGTCACGTGATCGAGGTTTGCTTATGAATCaagtctttaaaaaaatcacagGCCTTCCAAGCTTGGTTTTGATGAacatttttgtggctactgcctctataGAGGCGGTAGAGGCattgtaacgacttttgctgatatcgtgcttcgaCTTTcctccctttaaaaatgaacaataaacaaacagataaagctatgaatattagtagCAAAAActaaaccaaaaaaataattaaaattaaaacagaaaaagaaaaaaagagtaaaagtccaaaccttcagtaggtatcctgattaagtcacccatccaggtactaaccgcgcccaactggcttgactttgagtcaacttccatgtccacgtttttttcacttgaccacagttccacgagaatacgtcacaatagccactcgaaaacaatgcggcgaatagactagacgcatttgatacaatcgttttaacgattccgtgcgtggtcgagtggtgcaaggggctagctgaaggtatggtctgggggccggctagtctctcccctgatgcttttgctagaacacagatctcaacgtaaaccgtacagggCCGTAGGATGTAATTACCGTCAagctccactgtaccataccccccaAGTTaaagtaaccatttttgaagcttggcaaaactgaatattaactctgcacacaggaagaccaaaacaagtcacaggaatcagttttttggcaatctccaacgaccttccgattctcgctagcgttagatcggatgaatcattccaataaacccaggggaaaacagaaatcaagaGAACTATGTTTTGATAagtttttagtgacttacccttaaccgcaacatcgtcccagttttctataatccaaagcaatagccacatgcagtcaacgactgtctatttttgatAAAGTCAACAAAATTTTAAGCGGTAAATTTTTCGATAAAGCAGTTTCAAATGCTGCGaatattaatttcattttttataataGATATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VCM2	NADPH oxidase organizer 1 OS=Mus musculus OX=10090 GN=Noxo1 PE=1 SV=2
Q9NZM3	Intersectin-2 OS=Homo sapiens OX=9606 GN=ITSN2 PE=1 SV=3
O55033	Cytoplasmic protein NCK2 OS=Mus musculus OX=10090 GN=Nck2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004308 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF00787 all species →	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR051228 all species →	Family	NADPH Oxidase and PX Domain-Containing	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15706 all species →	SH3 MULTIPLE DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016176 all species →	Molecular Function	superoxide-generating NADPH oxidase activator activity	Interproscan
GO:0042554 all species →	Biological Process	superoxide anion generation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24032	SH3PXD2; SH3 and PX domain-containing protein 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.