Gene detail

Detailed information of ENSKFPP00000022709.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031570375.1, 2-oxoglutarate and iron-dependent oxygenase JMJD4-like [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

Transcript

ENSKFPT00000024604

attcaaaatggcggacgaacaGCACCAAAATAGGCCAAAAAGTAGGCTTCAAAAATGCCCCAAAAATGATTATTTAGAACGCCTTAGAGATATAAAGTACGATGAGTTCTTTAAAGACTATCTTCTGGCAAACAGGCTTTGTATTTTTTCGCGTGATTTGACGAATTCTTGGAGGAGTAGACGAGAATGGGTCAAAGATGGTTGTCCAAACTACGACTTTCTTGAACAGCATTTCGGTAGTACAACAGTTCCAGTGGCAGACTGTGGTAAGAAGTTTTGTGATAGTCACCTTAAACAAGAAATGAAGCTTGACGAGTATTTACAATACTTGAAAACACGAGgCAGTGGCATCAGCGAATGTCTTTATTTGAAAGACTGGCACTTTCGTAAACAATTTCCAGAGTATATAGCATATGAAACCCCTAAGTACTTtaaatctgattggctgaatgaATATTGGGATCAATGCAATGATGGTTCTGATGATTACAGATTTGTATACTTTGGACCAAAAGGATCTTGGACTCCATTTCATGCAGATGTCTTCAGGTCATACAGCTGGTCAGCCAATATTTGTGGCCATAAACGATGGTACATCTACCCGCCAGGCCAGGAAGAGTACCTTTATGACACACTAGGGAACCTTGCTTATGACATAAcagcaaatgaaataaatgatatgGAAAAATACCCTAAAACTAAACACATTCAAGATCCAATTATTGTTGACCAGATGGAAGGAGAAGTAATATTCATACCCAGtGGATGGCACCATCAGGTCCACAATATGGAGGATACAATTTCCATCAATCATAACTGGACTAATGCCTGTGGATTATTAAACATGTGGAATCATCTTCAAAATGAGCTGATAAGGATAGAAAAGAGTATAGAAGACTGTCAGGAAATGGAAGATTGGCGTCAGCATTGTCAGCTTATGTTGAAAGCAATGGCTGGAATGGATTACTGTGACTTTGTGAACTTCTTAGTCACCATAGCAAAACCCAGACTGGAATTCcttcaaaaacaaacagacagaaaTAAAAACAGTGATATTAAACATGTATTAGTTTTTgaagaatggaaagaaagCATCAAGCAGCTCAAAGCAACAGAAGAATATACTCTAGAAGATTACTGTAGATTTGATTTATCCAAAATACAGAAAAGTATCATTTTGATTCAGAATGATGAAAGTTTTAAGAATCTACACGATGCAACTATGAAAtcaaaaatggacaaactTTTAGATCAAATATCCAATATTTCAGGAGAATATAAACTAAGAGATATGGAGTAAACTGAATTGGGTATTAATCCAGCAGGAATTCAAATATCAAAGGGAActcaattttaattaaatcaaACTGCATAGGATCGAGTTTGTTTAATATGTTTTTTATCATTAGCCGAAACGTCAAGCTATAAGCAAAAACTGACTCCagaaaattctaaaaaaataaaaaaagtctCACTATTTAGTTCTTAATAATTTGTTTAGAATAAATTATAGTTAAAATTATGGAATGGAATAGATAGATTAGATAGGAATATATGCTCTTGTCTAATAAGACTaacagggcatggctaattcacagattgaaccctaaaacaacctctgggctgatctaagtcagggcatggctaattcacagattgaaccctgaaacaacctctgggctgatctaagtcaggacatggctaactcacagatggaaccctgaaacaacctctgggctgatctaagtcagggcatggataACTCACAGACCAGAAAAGAAGTCACTTAGAGAGCAATAACAAATGagagaaaattattattaattcaaACTTACAAAAGAGTCCAaatattttcatgaaaaaagcataattttttcttatcatTCCTTAAATACCTTAATGAGCAAATAACTTTCTTATGTAAGTACTATTCTTCATTACCTGATTAAATCTAAGCAtaagcaataaaaaaaaagatttcaagataaaataatgacgaAATTTAACTGATAATTTACCCTGAATAATTTTCTTAAGATCCATTATAGTTTTTCATAATGTGTAGTTCCAGTAATTATCCATACCCTACCCACAGAGGATTTGGAATTTCCAAGGGGACGGGGGTTGCATTTTGATAAATTTGTACATAAAATATGGAATTTCCAGGGAAAGGGGGGCCTAAGAAGAAATCCTCGGGGGGTGGGTGGGGGGTTATATGGATCATTTCTGAAACTTCACAATTTATTCTTAATTTCAACCAAATATAACAAATTCCTATATCCATAGtatcttattttca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08BY5	2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Danio rerio OX=7955 GN=jmjd4 PE=2 SV=1
Q5ZHV5	2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Gallus gallus OX=9031 GN=JMJD4 PE=2 SV=1
Q8BFT6	2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Mus musculus OX=10090 GN=Jmjd4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003349 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13621 all species →	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003347 all species →	Domain	JmjC domain	Interproscan
IPR050910 all species →	Family	JMJD6 family arginine demethylases/lysyl-hydroxylases	Interproscan
IPR041667 all species →	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12480 all species →	ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016706 all species →	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0018126 all species →	Biological Process	protein hydroxylation	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0045905 all species →	Biological Process	positive regulation of translational termination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000022709.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.