Gene detail

Detailed information of ENSKFPP00000023364.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_031565511.1, sorting nexin-20-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKFPT00000025301

ATTTAGATCATTCTAGTTAGTCTACGATTCCAATTAAAAATAATGCAATAAAGatgatgaatttttaaatttcattaTTATGAGTCCTATAAATTACTCATTCAAACCCGCGGGTTTCGTCCCGTTCCTCGTAACCCATAATGCATAAGTGTCAAGggaatcaaaaataaacatggCGTCCAAAGCGTCCTGTTCGAAAGACGGAAAAATTCCTGGGAAATAACAGGCTCATAATGAAAGAACTAAACTCGTGACAAGCCTGCAACCTAGATAAAGTATAAAAACTAAGCCTGCTGCATATGTCTTCCAAACTTCTAGAGAAACTATCTCCTCCAGCGGATACAGAGGAGCTGGATAAAGAACTTGGTTCGTATGATGACTTGGACAGTCATCCTTCAACCATGATGTTCAATGGCCGATTGGTTATGATCAATGAAGCTGGATACCCACCTTCACAGCCTAAGAAAGGAGAAGTTGTTTTTGAGGAAGAGGATGAAAGCAGTGATGTAGACGAGCTGGATTTCCCTGTGGACAGTATTTCAAGAGGCTTTAGTATTAGCCAAAGCCATGATCTTAGACCATCACTCCGGTTTGAAATCTTGTCTACGAGGATTTGTGAGGAGGGCAAAAACAAGTTTGTGCTCTACACCGTCATAGTAGTGAAAACAGACGGCCTGGACAGCGACAAAGCAGTAGTTGAAAGACGCTACTCTGAATTCACAAATCTCTGCAAAGAACTCAAGAAAGTTTGTCCTGAATTAATGTCTAAAGTACGACTACCCAAAAAAGTTTTTGGatcaaaaaactttgatgGAGAGGTCATCCAGTCACGGTGCCGCgtatttgaaaagtttttatcTTACATCTACACCAATGATAGTGTGCGTAGCGCTCCTGCtttcaaagaatttttttatcttccTGACTTGAGGCAAGCATGCTCGGATATTCGTGGAGGCAAATGGGCTGACAGTCTAAGACTTCTTACCAATTGCTTACACCTTCAGCAAAAACTTGGAGATGGGATACCAGAAATAGTGGCTACATTAGGGAGTATGGTCGTGGCTTATGATAAAATTGGTCGATTCAAGGAAGCTGAACAATACGCTGAAGCTGCTCTTGATTTGATCGGCAGTAATGTTTCAAGTTCATATTTGATGCCACTTTTGAATACGAGGATTGAGCTGTGTTGGAGGTTGGGAAAGGATAAAAAAGATACGGAAAAAAAACTTGCTGCTGTTCAGAAAATTAGTGGGATTGAAGTGGAACACGCCTTTACATTAAGGGAATTAGCTGTCCATAGATATAGCGATGTTTTTGATTAGGAATCATGGTATAGATAAATAtcatatttttggaattatatttttgtacaTAAAATGTGTTCAAAGAAAATGCATGACCAACGAACGTAAGCAGAGAATAATGATCAAAGTATTTCGTGCGCCATTtctattttgacttttcccggAAAAATGCGGTACTGATTACAGCATGTACGACGTGTcagtgaaatggcttcccgttcattgttttttaatgtttttcatGTGGGTGCATGGCAAAGGTACGGTATGCCTTGCAGCACTTACATGGTATGACATGCAGGCATTGAAATGGATTCCCAAAAGAGTGGTTTTCGTTTGAGTGCATAATTGGAAACATACGTTTTATAGCGCTTACAGCACCTACATGGTAAAACATGCCGAAACATTGTAATGGCTTCCCATCAGAATGGGTTTTCGTATTAGTGCATGGGAAATGTATGGTATGCCTTACAGCACCATGGTATGACATGTCGAAACGAAACATTGTAATGGCTTCCCATCAGAATGGGTTTTCGTATTAGTGCATGGGAAACGTATGGTATGCCTTTCAGCACTTAGATGGTAAAACATGCCGAaacgtaacattgaaatggtttcccataACATCAGTTTTCGTTTCATTTGGCAGCATACGTTACTGCCTTACAGCACTAGACATAACATGCATAAAATGGTTTCCCataagcatgtttttttttgaccCAGTCACCAATGGCTGAAAACCGCGCTATCCCCGATCATTATTCGATGATTTACTGTTCAAGAATGAACTATAGAAAGTCCTTTTGATTAGAAATACCTGTATATAGTAGTCCGTAAATGTATATCTAATTAATTTCCTATGGACTCGaatattttccaaataaaACATTGTCGTATGATGTTTTATTGGAAATTGTATCGTAGTCATGTTTTGCTCAAGTAAAACTATACCTTATAGCTAACAAAGACCATCTTTCTGCTCCAAAAAACGGTTGGAAATGATCCGAAAAAAGG

Protein

Uniprot

Uniprot term	Description
Q2T9W1	Sorting nexin-20 OS=Bos taurus OX=9913 GN=SNX20 PE=2 SV=1
Q7Z614	Sorting nexin-20 OS=Homo sapiens OX=9606 GN=SNX20 PE=1 SV=1
Q9D2Y5	Sorting nexin-20 OS=Mus musculus OX=10090 GN=Snx20 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR039937	Family	Sorting nexin SNX20/SNX21	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20939	SORTING NEXIN 20, 21	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0031901	Cellular Component	early endosome membrane	Interproscan
GO:1901981	Molecular Function	phosphatidylinositol phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17931	SNX20; sorting nexin-20	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala