Gene detail

Detailed information of ENSKFPP00000027014.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031561954.1, transcription elongation factor A protein 1-like [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q29RL9	Transcription elongation factor A protein 1 OS=Bos taurus OX=9913 GN=TCEA1 PE=2 SV=1
Q4KLL0	Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1
P10711	Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006396 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08711 all species →	Med26	TFIIS helical bundle-like domain	Domain	Interproscan
PF01096 all species →	TFIIS_C	Transcription factor S-II (TFIIS)	Domain	Interproscan
PF07500 all species →	TFIIS_M	Transcription factor S-II (TFIIS), central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035441 all species →	Homologous_superfamily	TFIIS/LEDGF domain superfamily	Interproscan
IPR017923 all species →	Domain	Transcription factor IIS, N-terminal	Interproscan
IPR001222 all species →	Domain	Zinc finger, TFIIS-type	Interproscan
IPR003618 all species →	Domain	Transcription elongation factor S-II, central domain	Interproscan
IPR036575 all species →	Homologous_superfamily	Transcription elongation factor S-II, central domain superfamily	Interproscan
IPR003617 all species →	Domain	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type	Interproscan
IPR006289 all species →	Family	Transcription elongation factor, TFIIS	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11477 all species →	TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000027014.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.