Gene detail

Detailed information of ENSKFPP00000028053.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_020914640.1, THO complex subunit 1 [Exaiptasia diaphana]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96FV9	THO complex subunit 1 OS=Homo sapiens OX=9606 GN=THOC1 PE=1 SV=1
Q8R3N6	THO complex subunit 1 OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1
Q7SYB2	THO complex subunit 1 OS=Danio rerio OX=7955 GN=thoc1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005676 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11957 all species →	efThoc1	THO complex subunit 1 transcription elongation factor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021861 all species →	Family	THO complex, subunit THOC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13265 all species →	THO COMPLEX SUBUNIT 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000445 all species →	Cellular Component	THO complex part of transcription export complex	Interproscan
GO:0006406 all species →	Biological Process	mRNA export from nucleus	Interproscan
GO:0032784 all species →	Biological Process	regulation of DNA-templated transcription elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12878	THOC1; THO complex subunit 1	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.